KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:44:08 2014 Check: 00 .. Name: ENSP00000355517/1-486 Len: 502 Check: 6359 Weight: 1.00 Name: ENSBTAP00000034061/1-480 Len: 502 Check: 2702 Weight: 1.00 Name: ENSTTRP00000011122/1-486 Len: 502 Check: 4649 Weight: 1.00 Name: bmy_11174T0/1-399 Len: 502 Check: 6403 Weight: 1.00 Name: BACU009607/1-478 Len: 502 Check: 6447 Weight: 1.00 // 1 50 ENSP00000355517/1-486 -------MDS SVIQRKKVAV IGGGLVGSLQ ACFLAKRNFQ IDVYEAREDT ENSBTAP00000034061/1-480 -------MDS SDIQRKNIAI IGGGLVGSLN ACFLAKRNFQ VDIYEAREDI ENSTTRP00000011122/1-486 -------MDS SDIQRKNIAV IGGGLVGSLN ACFLAKRNFQ VNVYEAREDI bmy_11174T0/1-399 ---------- ---------- ---------- ---------- ---------- BACU009607/1-478 METTLAVMDS SDIQRKNIAV IGGGLVGSLN ACFLAKRNFQ VNVYEAREDI 51 100 ENSP00000355517/1-486 RVATFTRGRS INLALSHRGR QALKAVGLED QIVSQGIPMR ARMIHSLSGK ENSBTAP00000034061/1-480 RVTKSARGRS INLALSYRGR QALKAIGLED QVVSQGIPMR ARMIHSLSGK ENSTTRP00000011122/1-486 RVTKFARGRS INLALSYRGR QALKSIGLED QIVSQGIPMR ARMIHSLSGK bmy_11174T0/1-399 ---------- ---------- ---------- --------MR ARMIHSLSGK BACU009607/1-478 RVTKFARGRS INLALSYRGR QALKSIGLED QIVSQGIPMR ARMIHSLSGK 101 150 ENSP00000355517/1-486 KSAIPYGTKS QYILSVSREN LNKDLLTAAE KYPNVKMHFN HRLLKCNPEE ENSBTAP00000034061/1-480 KSAIPYGTKS QYILSISREN LNKDLLTAVE KYSNAKVHFG HRLVKCNPEK ENSTTRP00000011122/1-486 KSAIPYGTKS QYILSISREN LNKDLLTAVE KYPNAKVHFG HRLLKCNPEE bmy_11174T0/1-399 KSAIPYGTKS QYILSISREN LNKDLLTAVE KYPNAKVHFG HRLLKCNPEE BACU009607/1-478 KSAIPYGTKS QYILSISREN LNKDLLTAVE KYPNAKVHFG HRLLKCNPEE 151 200 ENSP00000355517/1-486 GMITVLGSDK VPKDVTCDLI VGCDGAYSTV RSHLMKKPRF DYSQQYIPHG ENSBTAP00000034061/1-480 GVITVLGQDK VPKDVTCDLI VGCDGAFSTV RTYLMKKPRF DYSQQYIPHG ENSTTRP00000011122/1-486 GTITVLGHEN VAKDVTCDLI VGCDGAYSTV RTHLMKKPRF DYSQQYIPHG bmy_11174T0/1-399 GMITVLGHEK VPKDVTCDLI VGCDGAYSTV RTHLMKKPRF DYSQQYIPHG BACU009607/1-478 GMITVLGHEN VPKDVTCDLI VGCDGAYSTV RTHLMKKPRF DYSQQYIPHG 201 250 ENSP00000355517/1-486 YMELTIPPKN GDYAMEPNYL HIWPRNTFMM IALPNMNKSF TCTLFMPFEE ENSBTAP00000034061/1-480 YMELNIPPKN GDYAMEPNYL HIWPRDTFMM IALPNMNKSF TCTLFMPFEE ENSTTRP00000011122/1-486 FMELTIPPKN GDYAMEPNYL HIWPRDTFMM IALPNMNKSF TCTLFMPFEE bmy_11174T0/1-399 FMELTIPPKN GDYAMEPNYL HIWPRDTFMM IALPNMNKSF TCTLFMPFEE BACU009607/1-478 FMELTIPPKN GDYAMEPNYL HIWPRDTFMM IALPNMNKSF TCTLFMPFEE 251 300 ENSP00000355517/1-486 FEKLLTSNDV VDFFQKYFPD AIPLIGEKLL VQDFFLLPAQ PMISVKCSSF ENSBTAP00000034061/1-480 FEKLLTSSDV LDFFQKYFPD SIPLIGKQAL VQDFFLLPAQ SMISVKCSSF ENSTTRP00000011122/1-486 FEKLQTSSDV LNFFQKYFPD SIPLIGKQTL AQDFFLLPAQ PMISVKCSSF bmy_11174T0/1-399 FEKLLTSSDV LNFFQKYFPD SIPLIGKQTL AQDFFLLPAQ PMISVKCSSF BACU009607/1-478 FEKLLTSSDV LNFFQKYFPD SIPLIGKQTL AQDFFLLPAQ PMISVKCSSF 301 350 ENSP00000355517/1-486 HFKSHCVLLG DAAHAIVPFF GQGMNAGFED CLVFDELMDK FSNDLSLCLP ENSBTAP00000034061/1-480 HFKSHCLLMG DAAHAIVPFF GQGMNAGFED CLVFDELMDK FNNDFSMCLP ENSTTRP00000011122/1-486 HFKSHCVLMG DAAHAIVPFF GQGMNAGFED CLVFDELMDK FNNDLSMCLP bmy_11174T0/1-399 HFKSHCVLMG DAAHAIVPFF GQGMNAGFED CLVFDELMDK FNNDLSMCLP BACU009607/1-478 HFKSHCVLMG DAAHAIVPFF GQGMNAGFED CLVFDELMDK FNNDLSMCLP 351 400 ENSP00000355517/1-486 VFSRLRIPDD HAISDLSMYN YIE------- --MRAHVNSS WFIFQKNMER ENSBTAP00000034061/1-480 EFSRLRIPDD HAISDLSMYN YIE------- --MRAHVNSR WFIFRKNIER ENSTTRP00000011122/1-486 EFSRLRIPDD HAISDLSMYN YIE------- --MRAHVNSR WFLFQKNIER bmy_11174T0/1-399 EFSRLRIPDD HAISDLSMYN YIEASENVWF YSMRAHVNSR WFLFQKNIER BACU009607/1-478 EFSRLRIPDD HAISDLSMYN YIE------- --MRAHVNSR WFLFQKNIER 401 450 ENSP00000355517/1-486 FLHAIMPSTF IPLYTMVTFS RIRYHEAVQR WHWQKKVINK GLFFLGSLIA ENSBTAP00000034061/1-480 LLHAIMPSTF IPLYTMVTFS RIRYHEAVLH WYWQKKVING GLFLLGTLIA ENSTTRP00000011122/1-486 FLHAIMPSTF IPLYTMVTFS RIRYHEAVLR WHWQKKVINK GLFFFGTLIA bmy_11174T0/1-399 FLHAIMPSTF IPLYTMVTFS RIRYHEAVLR WHWQKKVINK GLFFFGTLIA BACU009607/1-478 FLHALMPSTF IPLYTMVTFS RIRYHEAVLR WHWQKKVIKK GLFFFGTLIA 451 500 ENSP00000355517/1-486 ISSTYLLIHY MSPRSFLRLR RPWNWIAHFR NTTCFPAKAV DSLEQISNLI ENSBTAP00000034061/1-480 VSGTYLLMRY KSPSPLDYLR RPSEWVTYFQ NTGHVSLISL QVYCDY---- ENSTTRP00000011122/1-486 VSGTYLLMRS KSLRPLDYLR RPWDWVTYFQ NTACLPVNSL ESLEQIPNVI bmy_11174T0/1-399 VSGTYLLMRS KSLRPLDYLR RPWDWVTYFQ NTGHVSL--- ---------- BACU009607/1-478 VSGTYLLMRS KSLRPLDYLR RPWDWVTYFQ NTGHVSL--- ---------- 501 550 ENSP00000355517/1-486 SR ENSBTAP00000034061/1-480 -- ENSTTRP00000011122/1-486 RK bmy_11174T0/1-399 -- BACU009607/1-478 --