KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:44:11 2014 Check: 00 .. Name: ENSP00000369611/1-430 Len: 433 Check: 9794 Weight: 1.00 Name: ENSTTRP00000003007/1-427 Len: 433 Check: 1177 Weight: 1.00 Name: ENSBTAP00000034157/1-371 Len: 433 Check: 7418 Weight: 1.00 Name: bmy_17768T0/1-371 Len: 433 Check: 8315 Weight: 1.00 Name: BACU008204/1-371 Len: 433 Check: 8385 Weight: 1.00 // 1 50 ENSP00000369611/1-430 --MASSAKSA EMPTISKTVN PTPDPHQEYL DPRITIALFE IGSHSPSSWG ENSTTRP00000003007/1-427 VISPTNSAEM EVATLSKLLK S-PDLNEESL HPRIIIALFE IG-LPPVSCS ENSBTAP00000034157/1-371 ---------M EVPTLSKTRK P-PDLNEESL DLGIMIALFE IGSIPPVSCS bmy_17768T0/1-371 ---------M EVPTLSKTLK S-PDLSEESL DPRIIIALFE IGSLPPVSCS BACU008204/1-371 ---------M EVPTLSKTLK S-PDLNEESL DPRIIIALFE IGSLPPVSCS 51 100 ENSP00000369611/1-430 SLPFLKNSSH QVTEQQTAQK FNNLLKEIKD ILKNMAGFEE KITEAKELFE ENSTTRP00000003007/1-427 SLPSLKNSDH EATEQRIAKK FENLLKEIKD IVKHKTSYEE KIIETKESFE ENSBTAP00000034157/1-371 SLPSLKSSDH EATEQRIAKK FESLLKEIKD IVKHVTSYEQ KVTETKEPFK bmy_17768T0/1-371 SLPSLKNSDH EATEQQIAKK FENLLKEIKD IVKHMTSYEE KVIETKESFE BACU008204/1-371 SLPSLKNSDH EATEQRIAKK FENLLKEIKD IVKHMTSYEE KVIETKESFE 101 150 ENSP00000369611/1-430 ETNITEDVSA HKENIRGLDK INEMLSTNLP VSLAPEKEDN EKKQEMILET ENSTTRP00000003007/1-427 ETNISEDVSE LKEKIRELDK INKVLLEKLL ASWDLGKEQN SKKQEMMWKX ENSBTAP00000034157/1-371 ETNMFE-VSE LREKIIELDE INKELVKKLL ASLDLGKKEN AKKQEMRLD- bmy_17768T0/1-371 ETNISEDVSE LKEKIRELDK INKVLLEKLL ASWDLGKEQN SKKQEMMLE- BACU008204/1-371 ETNISEDVSE LKEKIRELDK INKVLLEKLL ASWDLGKEQN SKKQEMMLE- 151 200 ENSP00000369611/1-430 NITEDVSAHK ENIRGLDKIN EMLSTNLPVS LAPEKEDNEK KQQMIMENQN ENSTTRP00000003007/1-427 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000034157/1-371 ---------- ---------- ---------- ---------- -------NQN bmy_17768T0/1-371 ---------- ---------- ---------- ---------- -------NQN BACU008204/1-371 ---------- ---------- ---------- ---------- -------NQN 201 250 ENSP00000369611/1-430 SENTAQVFAR DLVNRLEEKK VLNETQQSQE KAKNRL-NVQ EETMKIRNNM ENSTTRP00000003007/1-427 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000034157/1-371 SEDTVQDCSG DLVNCSKGQK ALPETQLSKE KAKHGFPHIQ EENIRLRNNM bmy_17768T0/1-371 SKDTMQGCAR DLVNCSEEKR ALHETQLSKE KAKHRLPLVQ EENIKLRDNM BACU008204/1-371 SKDTMQGCAR DLVNCSEEKR ALHETQLSKE KAKHRFPLVQ EENIKLRDNM 251 300 ENSP00000369611/1-430 EQLLQEAEHW SKQHTELSKL IKSYQKSQKD ISETLGNNGV GFQTQPNNEV ENSTTRP00000003007/1-427 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX X-XXXXXXGA HSPTQTNNGV ENSBTAP00000034157/1-371 ERLLQEAEHW SVEHTELSKL IKSYQKSQND I-KTLKNNGT HSPTQTNNE- bmy_17768T0/1-371 EQLLQEAKHW SVQHTELSEL IKSYQKSQTD I-KTLENNGA HSPSQTNNGM BACU008204/1-371 EQLLQEAKHW SVQHTELSEL IKSYQKSQTD I-KTLENNGA HSPTQMNNGM 301 350 ENSP00000369611/1-430 SAKHELEEQV KKLSHDTYSL QLMAALLENE CQILQQRVEI LKELHHQKQG ENSTTRP00000003007/1-427 SAKHELEEQV RKLKQHTYPL HLIAALLENE CQILEQRVEL LKEFHHQKEG ENSBTAP00000034157/1-371 SAKQELEEQV KRLKEDTYSL HLIATLLENE CQILEQRVEL LDELHHQKEE bmy_17768T0/1-371 SAKHELEEQV RKLKQDTYSL HLIAALLENE CQILEQRVEL LKELHHQKEG BACU008204/1-371 SAKHELEEQV RKLKQDTYSL HLIAALLENE CQILEQRVEL LKELHHQKEG 351 400 ENSP00000369611/1-430 TLQEKPIQIN YKQDKKNQKP SEAKKVEMYK QNKQAMKGTF WKKDRSCRSL ENSTTRP00000003007/1-427 PLQGEPIQIN YEQNKKEQKL SEAEKVKIHK QNMQEM---F QKGDQFYRSL ENSBTAP00000034157/1-371 PLQGEPMQIN HEQSDKEQKL PEAEKVKIHE KNMPEVEGTF HKRDQFFTSL bmy_17768T0/1-371 PLQGEPIQIN YEQNKKEQKL SEAEKVKIHK QNMQEM---F QKGDQFYRSL BACU008204/1-371 PLQGEPIQVN YEQNKKEQKL SEAEKVKIHK QNMQEM---F QKGDQFYRSL 401 450 ENSP00000369611/1-430 DVCLNKKACN TQFNIHVARK ALRGKMRSAS SLR ENSTTRP00000003007/1-427 DVCHKRKARN NLFNTHIARR ALVGKKRPAS SLS ENSBTAP00000034157/1-371 DICHNKKAHN NQFNTRIAKR ALV-VKRPAS SLS bmy_17768T0/1-371 DVCHKKKARN NLFNTHIARR ALVGKKRPAS SLS BACU008204/1-371 DVCHKKKARN NLFNTHIARR ALVGKKRPAS SLS