KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:44:18 2014 Check: 00 .. Name: ENSP00000375829/1-517 Len: 776 Check: 2514 Weight: 1.00 Name: ENSBTAP00000034238/1-459 Len: 776 Check: 2957 Weight: 1.00 Name: bmy_21405T0/1-723 Len: 776 Check: 6098 Weight: 1.00 Name: ENSTTRP00000001321/1-535 Len: 776 Check: 6049 Weight: 1.00 // 1 50 ENSP00000375829/1-517 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000034238/1-459 ---------- ---------- ---------- ---------- ---------- bmy_21405T0/1-723 PSSPKSRPAF EETASDVLAF SEPEALQGVQ NGTQALLLGG VGFAPGVPAV ENSTTRP00000001321/1-535 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000375829/1-517 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000034238/1-459 ---------- ---------- ---------- ---------- ---------- bmy_21405T0/1-723 LRAAQRKRAP CSPGVSVRRA GAQSREGSPD PRRAPAPTCP PASRLGFSGP ENSTTRP00000001321/1-535 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000375829/1-517 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000034238/1-459 ---------- ---------- ---------- ---------- ---------- bmy_21405T0/1-723 TRLAGGERAR PRASAPGRGT CGRGRPGGLA GQVPSRKSPP PSRPAPPRAA ENSTTRP00000001321/1-535 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000375829/1-517 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000034238/1-459 ---------- ---------- ---------- ---------- ---------- bmy_21405T0/1-723 RALVHPSVRQ CTGAAARPGR AAGRPRRGPG RLLLRRAYPQ ANRGSRRRAA ENSTTRP00000001321/1-535 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000375829/1-517 ---------- ---------- ---------- ---------- ---------M ENSBTAP00000034238/1-459 ---------- ---------- ---------- ---------- ---------M bmy_21405T0/1-723 ARDAGRGDKR PGEPTCAGGG RGARGAAPSG HDARGRRAGS GGRRAVSGGM ENSTTRP00000001321/1-535 -------DKE PGEPTCAGGG RVARGVA-SG HEAR-----A GAR---SGDM 251 300 ENSP00000375829/1-517 AVSRKDWSAL SSLARQRTLE DEEEQERERR RRHRNLSSTT DDEAPRLSQN ENSBTAP00000034238/1-459 SVSRKSWAAL SSLTRQWTLE DEEEQERERR RRHRNLSSAT DDEDPPAR-- bmy_21405T0/1-723 SVSRKNWAAL SSLARQWTLE DEAEQERERR RRHRSLSSTT DNEVAQPAQ- ENSTTRP00000001321/1-535 SVSRKNWAKL SXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 301 350 ENSP00000375829/1-517 GDRQASASER LPSVEEAEVP KPLPPASKDE DEDIQSILRT RQERRQRRQV ENSBTAP00000034238/1-459 -DEDPLAPER LLSVEEAEGP RPPAADPRDE -EDVRAILRT RQERRQRRRE bmy_21405T0/1-723 -DRDPVAPER LPSVEEMEVP ARPPLDSRGE DEDVWAVLRA RQERRQRQRE ENSTTRP00000001321/1-535 XXXXXXXXXX LPSVEETEVS PQPPLDSSG- -EDVWAVLRA RQERRQRQRE 351 400 ENSP00000375829/1-517 VEAAQAPIQE RLEAEEGRNS LSPVQATQKP LVSKKELEIP PRRRLSREQR ENSBTAP00000034238/1-459 APVPELP--- ---------- ----EARQLP PAPEEQVQST SGRRLSPQRG bmy_21405T0/1-723 VEVAQAPVRE QLGAEE-EDG AGTGQARQPP LVPEKELKLL PRRRLSREQR ENSTTRP00000001321/1-535 ADVAQAPVRE QLDTEE-EDG AGTGQAGQLP PAPEKEMGLL LRRRLSRERQ 401 450 ENSP00000375829/1-517 GPWALEEESL VGREPEERKK GVPEKSPVLE KSSMPKKTAP EKSLVSDKTS ENSBTAP00000034238/1-459 ST---EEGGL AGKAP----- AGSKKPSAAG KT-----LEP EASLDPE--- bmy_21405T0/1-723 SSWVREEESL AGREPGCSRK EGSEKPSAPE KT-----LAP EKSLDSKEIS ENSTTRP00000001321/1-535 SSWVREEESL VGREPGCSRK GGSEKPSAPE KT-----LAP EKSLDSKEVS 451 500 ENSP00000375829/1-517 ISEKVLASEK TSLSEKIAVS EKRNSSEKKS VLEKTSVSEK SLAPGMALGS ENSBTAP00000034238/1-459 ----TPSPSK CSVSQKITVL EERAFSGKRA VLDKASI--- ---------S bmy_21405T0/1-723 ASEKNPSPEK VSVSQKIAVL QKRTISGKRV VLEKTSVLEK LPSPGKTSDS ENSTTRP00000001321/1-535 TSGKMPA-EK VSVSQKIAVL EKRTISGKTL VLEETSVLEK LPSPGKTSDS 501 550 ENSP00000375829/1-517 GRRLVSEKAS IFEKALASEK SPTADAKPAP KRATASEQPL AQEPPASGGS ENSBTAP00000034238/1-459 EKRLVSEKAT IF------EK TPAPETQPAL GRAMAPTRPL AREHPASVEC bmy_21405T0/1-723 EKRLTSEKAA VF------EK TPAPETQLAP VRAAAPGQP- ----QASAES ENSTTRP00000001321/1-535 EKRLTSEKAA VF------EK TPAPEMRRAP ARAAAPGQPR AQERPASAQS 551 600 ENSP00000375829/1-517 PATTKEQR-- GRALPGKNLP S----LAKQG ASDPPTVASR LPPVTLQVKI ENSBTAP00000034238/1-459 PSSPRGQRGA GGAGPEKEPE SSVGPLSRAG -S-------- LPPVTLQVRT bmy_21405T0/1-723 PSTPKGQ--- GRAGPEQEPP SSAG-LREQG -SERPAVTCR LPPITLQVKI ENSTTRP00000001321/1-535 PSTPKGQ--- GRAGPKQEPP PSAG-LRGQG -AERPAGTCH LPPITLQLKI 601 650 ENSP00000375829/1-517 PSKEEEADMS SPTQR--TYS SSLKRSSPRT ISFRMKPKKE NSETTLTRSA ENSBTAP00000034238/1-459 PSMEAEPEAP SPTRASPTFS SALQRSSPRT ISFRMSPRRD SSEVALTRSA bmy_21405T0/1-723 PSKEDEADTL SPTQA--TYS SSLKRSSPRT ISFRMSPRRD HSEAALTRST ENSTTRP00000001321/1-535 PSKEDEADTP SPTQA--TYS SSLKRFSPRT ISFRMSPRRD HSEAALTRSS 651 700 ENSP00000375829/1-517 SMKLPDNTVK LGEKLERYHT AIRRSESVKS RGLPCTELFV APVGVASKRH ENSBTAP00000034238/1-459 SVRLPASSVK LGPKLERYHS AIQRSESVKG ASPSRTEFLV APVDVASKRH bmy_21405T0/1-723 STRLPASSFT LGQKLERYHT AVQRSESVRS LGPSRPEFLV APVDVASKRH ENSTTRP00000001321/1-535 SMKIPASSFT LGQKLERYHT AVQSSESVRS PGPSHAEFLV APVDVASKRR 701 750 ENSP00000375829/1-517 LFEKELAGQS RAEPASSRKE NLRLSGVVTS RLNLWISRTQ ESGDQDP--Q ENSBTAP00000034238/1-459 LFEKELVGQS REGPASSRKE NLQLSGVVTS RLNLWISRTQ ESAQQGPQNQ bmy_21405T0/1-723 LFEKELVGQG REGPASSRKE NLRLSGVVTS RLNLWISRTQ ESGDQDP--Q ENSTTRP00000001321/1-535 LFEKELVGQG RGGAASSRKE NLRLSGVVTS RLNLWISKTQ ESGDGDP--Q 751 800 ENSP00000375829/1-517 EAQKASSATE RTQWGQKSDS SLDAEV ENSBTAP00000034238/1-459 EMQRESAAGR RPQWRKKPEP PLGAEV bmy_21405T0/1-723 ---------- ---------- -----V ENSTTRP00000001321/1-535 EEQKESAAAR RIQWRKKVD- SLDAKV