KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:44:18 2014 Check: 00 .. Name: ENSTTRP00000003012/1-399 Len: 571 Check: 5349 Weight: 1.00 Name: BACU012673/1-219 Len: 571 Check: 3344 Weight: 1.00 Name: bmy_17533T0/1-300 Len: 571 Check: 135 Weight: 1.00 Name: ENSBTAP00000034255/1-522 Len: 571 Check: 9677 Weight: 1.00 // 1 50 ENSTTRP00000003012/1-399 MHCTLTMETE AIDGYITCDN ELSPEREHSS MAIDLTSSTP NGQHASPSHM BACU012673/1-219 ------METE AIDGYITCDN ELSPEREHSS MAIDLTSSTP NGQHASPSHM bmy_17533T0/1-300 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000034255/1-522 ---------- ---------- ---------- ---------- ---------M 51 100 ENSTTRP00000003012/1-399 TSXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU012673/1-219 TSTNSVKLEM QSDEECDRKP LSREDEIRGH DEGSSLEEPL IESSEVADNR bmy_17533T0/1-300 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000034255/1-522 TSTNSVKLEM QSDEECDRKP LSREDEIRGH DEGSSLEEPL IESSEVADNR 101 150 ENSTTRP00000003012/1-399 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXERPFHCNQ BACU012673/1-219 KVQELQGEGG IRLPN----- ---------- ---------- -GERPFHCNQ bmy_17533T0/1-300 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000034255/1-522 KVQELQGEGG IRLPNGKLKC DVCGMVCIGP NVLMVHKRSH TGERPFHCNQ 151 200 ENSTTRP00000003012/1-399 CGASFTQKGN LLRHIKLHSG EKPFKCPFCS YACRRRDALT GHLRTHS--- BACU012673/1-219 CGASFTQKGN LLRHIKLHSG EKPFKCPFCS YACRRRDALT GHLRTHS--- bmy_17533T0/1-300 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000034255/1-522 CGASFTQKGN LLRHIKLHSG EKPFKCPFCS YACRRRDALT GHLRTHSGII 201 250 ENSTTRP00000003012/1-399 ---------- ---------- ---------- ------XXXX XXXXXXXXXX BACU012673/1-219 ---------- ---------- ---------- ------VGKP HKCNYCGRSY bmy_17533T0/1-300 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000034255/1-522 PHVEMVYKEN VNMMRTVVSY NADILYYNSK DVSPERMGKP HKCNYCGRSY 251 300 ENSTTRP00000003012/1-399 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XHVPPMEDCK EQEPIMDNNI BACU012673/1-219 KQRSSLEEHK ERCHNYLQNV SMEAAGQVMS HHVSPM---- ---------- bmy_17533T0/1-300 ---------- ---------- -MEAAGQVMS HHVPPMEDCK EQEPIMDNNI ENSBTAP00000034255/1-522 KQRSSLEEHK ERCHNYLQNV SMEAAGQVMS HHVPPMEDCK EQEPIMDNNI 301 350 ENSTTRP00000003012/1-399 SLVPFERPAV IEKLTGNMGK RKSSTPQKFV GEKLMRFSYP DIHFDMNLTY BACU012673/1-219 ---------- ---------- ---------- ---------- ---------Y bmy_17533T0/1-300 SLVPFERPAV IEKLTGNMGK RKSSTPQKFV GEKLMRFSYP DIHFDMNLTY ENSBTAP00000034255/1-522 SLVPFERPAV IEKLTGNMGK RKSSTPQKFV GEKIMRFSYP DIHFDMNLTY 351 400 ENSTTRP00000003012/1-399 EKEAELMQSH MMDQAINNAI TYLGAEALHP LMQHPPSTIA EVAPVISSAY BACU012673/1-219 NKG------- ---------- ---------- ---------- ---------- bmy_17533T0/1-300 EKEAELMQSH MMDQAINNAI TYLGAEALHP LMQHPPSTIA EVAPVISSAY ENSBTAP00000034255/1-522 EKEAELMQSH MMDQAINNAI TYLGAEALHP LMQHPPSTIA EVAPVISSAY 401 450 ENSTTRP00000003012/1-399 S-VYHPNRIE RPIS-ETSDS HEN--DGPIS LIRPRSRTQE RE-------- BACU012673/1-219 ---------- ---------- ---------- ---------- ---------- bmy_17533T0/1-300 SQVYHPNRIE RPISRETSBS HENNMDGPIS LIRPKSRPQE REASPSNSCL ENSBTAP00000034255/1-522 SQVYHPNRIE RPISRETSDS HENNMDGPIS LIRPKSRPQE REASPSNSCL 451 500 ENSTTRP00000003012/1-399 ---------- ---------- ---------- ---------- ---------- BACU012673/1-219 ---------- ---------- ---------- ---------- ---------- bmy_17533T0/1-300 DSTDSESSHD DHQSYQGNPA LNPKRKQSPA YMKEDVKALD TTKAPKGSLK ENSBTAP00000034255/1-522 DSTDSESSHD DHQSYQGNPA LNPKRKQSPA YMKEDVKALD TTKAPKGSLK 501 550 ENSTTRP00000003012/1-399 ---------- ---------- ---------- ---------- ---------- BACU012673/1-219 ---------- ---------- ---------- ---------- ---------- bmy_17533T0/1-300 DIYKVFNGEG EQIRAFKCEH CRVLFLDHVM YTIHMGCHGY RDPLECNICG ENSBTAP00000034255/1-522 DIYKVFNGEG EQIRAFKCEH CRVLFLDHVM YTIHMGCHGY RDPLECNICG 551 600 ENSTTRP00000003012/1-399 ---------- ---------- - BACU012673/1-219 ---------- ---------- - bmy_17533T0/1-300 YRSQDRYEFS SHIVRGEHTF H ENSBTAP00000034255/1-522 YRSQDRYEFS SHIVRGEHTF H