KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:44:22 2014 Check: 00 .. Name: ENSTTRP00000000963/1-528 Len: 864 Check: 2738 Weight: 1.00 Name: ENSP00000391524/1-585 Len: 864 Check: 1395 Weight: 1.00 Name: bmy_14621T0/1-847 Len: 864 Check: 4994 Weight: 1.00 Name: ENSBTAP00000034366/1-580 Len: 864 Check: 9983 Weight: 1.00 // 1 50 ENSTTRP00000000963/1-528 ---------- ---------- ---------- ---------- ---------- ENSP00000391524/1-585 ---------- ---------- ---------- ---------- ---------- bmy_14621T0/1-847 NSSSTPEECE ETSERPKRKQ KQKPQEAPQE NGMEDPSVSF SKPKKKKSSS ENSBTAP00000034366/1-580 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000000963/1-528 ---------- ---------- ---------- ---------- ---------- ENSP00000391524/1-585 ---------- ---------- ---------- ---------- ---------- bmy_14621T0/1-847 TEELVSSDLE ETAGSGSPPK RKKSFPKEEP VRAFCHLYPP AQTPRVLLLS ENSBTAP00000034366/1-580 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000000963/1-528 ---------- ---------- ---------- ---------- ---------- ENSP00000391524/1-585 ---------- ---------- ---------- ---------- ---------- bmy_14621T0/1-847 RPSGSHSVAW FSCDTFLPSP IPTSFPKHMN SLHVHPGLGP LWPERSLLFG ENSBTAP00000034366/1-580 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000000963/1-528 ---------- ---------- ---------- ---------- ---------- ENSP00000391524/1-585 ---------- ---------- ---------- ---------- ---------- bmy_14621T0/1-847 GLGAAPPHGS PPAARGVRGR VRAVLVRDGR STAPRSGPGA PRPPPPVRSP ENSBTAP00000034366/1-580 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000000963/1-528 ---------- ---------- ---------- ---------P ---------- ENSP00000391524/1-585 ---------- ---------M DALLGTGPRR ARGCLGAAGP TSSGRAARTP bmy_14621T0/1-847 GNVSGRSPGN ARPFSVAGAM DQGSGAGPHR ARGRLGA--P SC---GARAP ENSBTAP00000034366/1-580 ---------- ---------Q GAGAGAGPQR ARGRLGA--P SS---GMRAP 251 300 ENSTTRP00000000963/1-528 ---------- ---------- -------QLV YPSDFQLTDK EKSSICYLSF ENSP00000391524/1-585 AAPWARFSAW LECVCVVTFD LELGQALELV YPNDFRLTDK EKSSICYLSF bmy_14621T0/1-847 GAPWARFSAW LECVCVVTFD LELGQALELV YPSDFQLTDK EKSSICYLSF ENSBTAP00000034366/1-580 GTPWARFSAW LECVCVVTFD LELGQALELV YPSDFQLTDK EKSSICYLSF 301 350 ENSTTRP00000000963/1-528 PDSHSG---- ---------- ---------- ---------- ---------- ENSP00000391524/1-585 PDSHSG---- ---------- ---------- ---------- ---------- bmy_14621T0/1-847 PDSHSGRPPR LAPAWVSLWG CGEKKKEGDE AAQEPLRPGL HSLRGSSPTW ENSBTAP00000034366/1-580 PDSHSG---- ---------- ---------- ---------- ---------- 351 400 ENSTTRP00000000963/1-528 ---------- -CLGDTQFCF RIRQCGGQRR PWHTDDRHCD SGAPVSLQRE ENSP00000391524/1-585 ---------- -CLGDTQFSF RMRQCGGQRS PWHADDRHYN SRAPVALQRE bmy_14621T0/1-847 TQREGTTSSP GCLGDTQFSF RIRQCGGQRR PWHTDDRHCD SGAPMSLQRE ENSBTAP00000034366/1-580 ---------- -CLGDTQFSF RIRQCGGQRC PGHAGEKPGD RGAPASLQRE 401 450 ENSTTRP00000000963/1-528 PAHYFGYVYF RQVKDSSVKR GYFQK----- SLVLVSRLPF VRLFQALLSL ENSP00000391524/1-585 PAHYFGYVYF RQVKDSSVKR GYFQK----- SLVLVSRLPF VRLFQALLSL bmy_14621T0/1-847 PAHYFGYVYF RQVKDSSVKR GYFQKPRALQ SLVLVSRLPF VRLFQALLSL ENSBTAP00000034366/1-580 PAHYFGYVYF RQVKDSSVKR GYFQK----- SLVLLSRLPF VRLFQALLGL 451 500 ENSTTRP00000000963/1-528 VAPEYFDKLA PCLEAVCNEI DQWPAPVPGQ TLNLPVMGVV LQVHIPSSAD ENSP00000391524/1-585 IAPEYFDKLA PCLEAVCSEI DQWPAPAPGQ TLNLPVMGVV VQVRIPSRVD bmy_14621T0/1-847 VAPEYFDKLA PCLEAVCNEI DQWPAPVPGQ TLNLPVMGVV LQVHIPSRAD ENSBTAP00000034366/1-580 VAPEFFDKLA PCLEAVCNEI DQWPAPAPGR TLSLPVMGVV LQVHIPSRAD 501 550 ENSTTRP00000000963/1-528 KPESGPPKQC SHKNLLPAPV VLTSVHELDL FXXXXXXXXX XXXXXXXXXX ENSP00000391524/1-585 KSESSPPKQF DQENLLPAPV VLASVHELDL FRCFRPVLTH MQTLWELMLL bmy_14621T0/1-847 KPESGPPKQC SHENLLPAPV VLTSVHELDL FRCFRPVLAH VQLLWELMLL ENSBTAP00000034366/1-580 TPESGPLEPS GHETLLPAPV VLPSVHELDL FRCFRPVLAH VQLLWELMLL 551 600 ENSTTRP00000000963/1-528 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000391524/1-585 GEPLLVLAPS PDVSSEMVLA LTSCLQPLRF CCDFRPYFTI HDSEFKEFTT bmy_14621T0/1-847 GEPLLVLAPS PAVSSEMVLA LTSCLQPLKF CCDYRPYFTV HDNEFKEFTT ENSBTAP00000034366/1-580 GEPLLVLAPS PAVSSEMVLA LTSCLQPLKF CCDYRPYFTI HDSEFKEFTT 601 650 ENSTTRP00000000963/1-528 XXXXXPSVVL GVTNPFFIKT LQHWPHVLRI GEPKMPGDLP KQIKLKKPSR ENSP00000391524/1-585 RTQAPPNVVL GVTNPFFIKT LQHWPHILRV GEPKMSGDLP KQVKLKKPSR bmy_14621T0/1-847 RTQAPPSVVL GVTNPFFIKT LQHWPHVLRI GEPKMPGE-- ---------R ENSBTAP00000034366/1-580 RTQAPPNVVL GVTNPFFIKT LQHWPHILRV GEPKMSGDLP KQVKLKKPSR 651 700 ENSTTRP00000000963/1-528 LKTLDTKPGL YTAYTTYLHR DKALLRRLLK GLQRKRPSDV QTAVLRQHLL ENSP00000391524/1-585 LKTLDTKPGL YTAYTAHLHR DKALLKRLLK GVQKKRPSDV QSALLRRHLL bmy_14621T0/1-847 AAILPS-PGL YTAYTTYLHR DKALLRRLLK GLQKKRPSDV QTAVLRRHLL ENSBTAP00000034366/1-580 LKTLDTKPGL YTAYTAHLHR DKALLRRLLK GLQKKRPSDV QTAVLRRHLL 701 750 ENSTTRP00000000963/1-528 ELTQSFIIPL EHYMASLMPL QKSITPWKTP PQIHPFRQDD FLRSLERSGP ENSP00000391524/1-585 ELTQSFIIPL EHYMASLMPL QKSITPWKTP PQIQPFSQDD FLRSLEHAGP bmy_14621T0/1-847 ELTQSFIIPL EHYMASLMPL QKSITPWKTP PQIHPFHQDD FLRSLEHSGP ENSBTAP00000034366/1-580 ELTQSFIIPL EHYMASLMPL QKGIVPWKTP PQIRPFRQDD FLQSLERSGP 751 800 ENSTTRP00000000963/1-528 QLTCLLKGDW LGLYRRFFKS PHFDGWYRQR HKEMAQKLEA LHLEAICEAN ENSP00000391524/1-585 QLTCILKGDW LGLYRRFFKS PHFDGWYRQR HKEMALKLEA LHLEAICEAN bmy_14621T0/1-847 QLTCLLKGDW LGLYRRFFKS PHFDGWYRQR HKEMAQKLEA LHLEAICEAN ENSBTAP00000034366/1-580 QLTCVLKGDW LGLYRRFFKS PHFDGWYRQR HREMTQKLEA LHLEAICEAN 801 850 ENSTTRP00000000963/1-528 LEIWMQDKSE VEVVDLVLKL RERLVRAQGH QLPVKEATLK RARLYIETVV ENSP00000391524/1-585 IETWMKDKSE VEVVDLVLKL REKLVRAQGH QLPVKEATLQ RAQLYIETVI bmy_14621T0/1-847 IEIWMKDKSE VEVVDLVLKL RERLVRAQGH QLPVKEATLK RARLYIETVI ENSBTAP00000034366/1-580 IEIWMKDKSE VEVVDLILKL RERLVRAQGH QLPVKEATLK RARLYIDTAI 851 900 ENSTTRP00000000963/1-528 GSLPKDLQVV LCPP ENSP00000391524/1-585 GSLPKDLQAV LCPP bmy_14621T0/1-847 GSLPKDLQVV LCPP ENSBTAP00000034366/1-580 GSLPKDLQAV LCPP