KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:44:22 2014 Check: 00 .. Name: ENSP00000357036/1-332 Len: 358 Check: 1404 Weight: 1.00 Name: ENSBTAP00000034373/1-334 Len: 358 Check: 7821 Weight: 1.00 Name: bmy_06319T0/1-301 Len: 358 Check: 7200 Weight: 1.00 Name: BACU003872/1-301 Len: 358 Check: 7949 Weight: 1.00 Name: ENSTTRP00000002475/1-330 Len: 358 Check: 2529 Weight: 1.00 // 1 50 ENSP00000357036/1-332 ---------- ---------M LWLFQSLLFV -FCFGPGNVV SQSSLTPLMV ENSBTAP00000034373/1-334 MARALTILKS PTPFSTAKSM IWLFQALLLV FFCRGPGNSF SEASSTPLVV bmy_06319T0/1-301 ------MEKG CGEQGEGREN ---YSSFLSV -FT---GNTV SQTSSTPLIV BACU003872/1-301 MPRTLTALRS PAPFSTAKSM IWLFQFLTLV -FCLGPGNTV SQTSSTPLIV ENSTTRP00000002475/1-330 ---------- ---------M IWLFQSLTLV -SCLGPGNTV SQTSSTPLIV 51 100 ENSP00000357036/1-332 NGILGESVTL PLEFPAGEKV NFITWLFNET SLAFIVPHET KSPEIHVTNP ENSBTAP00000034373/1-334 NGVLRESVTL PSKFPVKENI TFITWLHEGS SVIFIWPKEA KI---QVTDP bmy_06319T0/1-301 NGVVGESVTL TLKFPVEEKI MSITWLHDGK SIIFIEPNEA LN---RVTDP BACU003872/1-301 NGVVGESVTL TLKSPMEEKI MSITWLHDGK SIIFIEPNEA LN---RVTDP ENSTTRP00000002475/1-330 NGVLGESVTL TLKFPVEEKI TSITWLHEGK SAIFIEPNEA LN---RVTDP 101 150 ENSP00000357036/1-332 KQGKRLNFTQ SYSLQLSNLK MEDTGSYRAQ ISTKTSAKLS SYTLRILRQL ENSBTAP00000034373/1-334 KRKDQLNVTE SYSLHLNNLS MADVGHYRAQ ITTSTSSLNT DYNLQIFRRL bmy_06319T0/1-301 KRKNRLKVTE SYSLQLSNLT MADTGPYSAQ ITTLTSSLFT SYDLRIFRRL BACU003872/1-301 KRKNRLKVTK SYSLQLSNLT MADTGPYSAQ ITTLTSSLFT NYDLRIFRRL ENSTTRP00000002475/1-330 KRKNRLNVTE SYSLQLSNLT MADSGLYRAQ ITTLTSSLFT DYDLRIFRRL 151 200 ENSP00000357036/1-332 RNIQVTNHSQ LFQNMTCELH LTCSVEDADD NVSFRWEALG NTLSSQPNLT ENSBTAP00000034373/1-334 SNLQVAHHTT WSENNTCEIQ LMCSVENPND NVSFRWQVAG NPYHSEANLS bmy_06319T0/1-301 RNLQVVPHTK WSKNRTCEIH LTCSVENPND NILFRWQVSG NTLQSEANLT BACU003872/1-301 RNLQVVPHTK WSKNRTCEIH LTCSVENPND NILFRWQVSG NTLQSEANLT ENSTTRP00000002475/1-330 RNLQVVPHTK WSNNRTCEIL LTCSVENPND NILFRWQVSG NTLQSEANLT 201 250 ENSP00000357036/1-332 VSWDPRISSE QDYTCIAENA VSNLSFSVSA QKLCEDV--- KIQYTDTKMI ENSBTAP00000034373/1-334 ISWDPKSLSE ETYTCIAENP VSYLSFSVSD KSVCEGVING KNEYLDIRWI bmy_06319T0/1-301 ISWDPKSFNE ETYTCVAENP VSNSSFSVSV QRLCKS---- ---------- BACU003872/1-301 ISWDPKSFDE ETYTCVAENP VSNSSFSVSV QSLCKSVTNE KNEHLDTMWI ENSTTRP00000002475/1-330 ISWDPKSFNE ETYTCVAENA VSNSSFSVSV QSLCKSVTNE KNEHLDTMWI 251 300 ENSP00000357036/1-332 LFMVSGICIV FGFIILLLLV LRKRRDSLSL STQRTQGPAE SARNLEYVSV ENSBTAP00000034373/1-334 IIVVVLTC-- ---------- ------FFQL STQQTQCHAE TVSNLEYASF bmy_06319T0/1-301 ---------- ---------- ------FFQF STQQTQCPAE TVRNLEYASF BACU003872/1-301 VVAVPSICIV V-VIIVSLFV CRKKIGFL-- ---------- ---------- ENSTTRP00000002475/1-330 VVAVSSICIV --VVIIVLLF VWRKKSFFQF STQQTQCPAE TVRNVEYASF 301 350 ENSP00000357036/1-332 SPTNNTVYAS VTHSNRETEI WTP-RENDTI TIYSTINHSK ESKPTFSRAT ENSBTAP00000034373/1-334 SS-GNTVYAQ VTHSNKETKI PKLVKNYDST TIYSEVNHPQ ERKPIYTRTA bmy_06319T0/1-301 SP-GNTVYAQ VTHSNREMEI PKPVKNNDST TIYSEVQQSR EKAHLFQDNC BACU003872/1-301 ----SSYLLS LLQGSRDLAF GTS------- ---------- ------TRLC ENSTTRP00000002475/1-330 SP-GSTVYAQ VTHSKREMEI PKPVKNNDST TIYSEVQQSQ ERKPTYSRTT 351 400 ENSP00000357036/1-332 ALDNVV-- ENSBTAP00000034373/1-334 AHHNVV-- bmy_06319T0/1-301 PSQCHVSC BACU003872/1-301 LVEDR--- ENSTTRP00000002475/1-330 ALHSVM--