KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:44:30 2014 Check: 00 .. Name: ENSBTAP00000034522/1-1220 Len: 1222 Check: 4595 Weight: 1.00 Name: ENSP00000289371/1-1220 Len: 1222 Check: 7573 Weight: 1.00 Name: ENSTTRP00000009847/1-1220 Len: 1222 Check: 5008 Weight: 1.00 Name: bmy_09408T0/1-1218 Len: 1222 Check: 3480 Weight: 1.00 Name: BACU017689/1-1218 Len: 1222 Check: 3053 Weight: 1.00 // 1 50 ENSBTAP00000034522/1-1220 LGDGTRNETR ISAKDDIDLD ALAAEIEGAG AAREQEPQKA KGKKKKEKKR ENSP00000289371/1-1220 MGKKQKNKSE DSTKDDIDLD ALAAEIEGAG AAKEQEPQKS KGKKKKEKKK ENSTTRP00000009847/1-1220 MGKKQKNKSE DSAKDDIDLD ALAAEIEGAG AAKEQEPQKA KGKKKKEKKK bmy_09408T0/1-1218 MGKKQKNKSE DSAKDDIDLD ALAAEIEGAG AAKEQEPQKV KGKKKKEKKK BACU017689/1-1218 MGKKQKNKSE DSAKDDIDLD ALAAEIEGAG AAKEQEPQKA KGKKKKEKKK 51 100 ENSBTAP00000034522/1-1220 QDFDEDDILK ELEELSWEAQ GIKADREPAA VKPTENNEDE PISKQDKKKK ENSP00000289371/1-1220 QDFDEDDILK ELEELSLEAQ GIKADRETVA VKPTENNEEE FTSK-DKKKK ENSTTRP00000009847/1-1220 QDFDEDDILK ELEELSWEAQ GIKADRETAT AKPTENNEDE FTSKQDKKKK bmy_09408T0/1-1218 QDFDEDDILK ELEELSWEAQ GIKADRETAT AKPTENNEDE STSKQDKKKK BACU017689/1-1218 QDFDEDDILK ELEELSWEAQ GIKADRETAT AKPTESNEDE STSKQDKKKK 101 150 ENSBTAP00000034522/1-1220 GQKGKKQSFE DNDSEELEEK DSKSKKTAKP KVEMYSGSDD DDDFNKLSKK ENSP00000289371/1-1220 GQKGKKQSFD DNDSEELEDK DSKSKKTAKP KVEMYSGSDD DDDFNKLPKK ENSTTRP00000009847/1-1220 GQKGKKQSFE DNDSEELEDK DSKSKKTAKP KMEMYSGSDD DDDFSKLSKK bmy_09408T0/1-1218 GQKGKKQSFE DNDSEELEDK DSKSKKTAKP KVEMDSGSDD DDDFSKLSKK BACU017689/1-1218 GQKGKKQSFE DNDSEELEDK DSKSKKTAKP KVEMDSGSDD DDDFSKLSKK 151 200 ENSBTAP00000034522/1-1220 AKGKAQKSNK KRDASEEDED NSKRIKERMR AHSSGESGDE SDEFLQSRKG ENSP00000289371/1-1220 AKGKAQKSNK KWDGSEEDED NSKKIKERSR INSSGESGDE SDEFLQSRKG ENSTTRP00000009847/1-1220 AKGKAQKSNK KQDGSEEDED NSKRIKDCMR VHSSGESGDE SDEVLQSRKG bmy_09408T0/1-1218 AKGKAQKSNK KRDGSEEDEX NSKRIKDCMR VPSSGESSDE SDEFLQSRKG BACU017689/1-1218 AKGKTQKSNK KRDGSEEDED NSKRIKDCMR VPSSGESSDE SDEFLQSRKG 201 250 ENSBTAP00000034522/1-1220 QKKNQKNKPG PTVESGNEDD DSSFKIKTVA QKKAEKKERE RKKRDEEKAK ENSP00000289371/1-1220 QKKNQKNKPG PNIESGNEDD DASFKIKTVA QKKAEKKERE RKKRDEEKAK ENSTTRP00000009847/1-1220 QKKNQKNKPG PNVESGNEDD DSSFKIKTMA QKKAEKKERE RKKRDEEKAK bmy_09408T0/1-1218 QKKNQKNKPG PNVESGNEDD DS-FKIKTMA QKKAEKKERE RKKRDEEKAK BACU017689/1-1218 QKKNQKNKPG PNAESGNEDD DS-FKIKTMA QKKAEKKERE RKKRDEEKAK 251 300 ENSBTAP00000034522/1-1220 LRKLKEKEEL ESGKKDLGKP KESQRKPEEE ALKSKVTLDS GAAPASEEKG ENSP00000289371/1-1220 LRKLKEKEEL ETGKKDQSKQ KESQRKFEEE TVKSKVTVDT GVIPASEEKA ENSTTRP00000009847/1-1220 LRKLKEKEEL ESGKKDQSKP KESQRKSEEE AVKSKVTLDS GAPPASEEKG bmy_09408T0/1-1218 LRKLKEKEEL ESGKKDQSKP KESQRKSEEE AVKSKVTLDS GAPPASEEKG BACU017689/1-1218 LRKLKEKEEL ESGKKDQSKP KESQRKSEEE AVKSKVTLDS GAPPASEEKG 301 350 ENSBTAP00000034522/1-1220 EGPIGAEVDD NEGDKKKKDK KKKKGEKEEK EKEKKKGPSK ATVKAMQEAL ENSP00000289371/1-1220 ETPTAAE-DD NEGDKKKKDK KKKKGEKEEK EKEKKKGPSK ATVKAMQEAL ENSTTRP00000009847/1-1220 EAPTAAE-DD NEGDKKKKDK KKKKGEKEEK EKEKKKGPSK ATVKAMQEAL bmy_09408T0/1-1218 EARTAAE-DD NEGDRKKKDK KKKKGEKEEK EKEKKKGPSK ATVKAMQEAL BACU017689/1-1218 EARTAAE-DD NEGDKKKKDK KKKKGEKEEK EKEKKKGPSK ATVKAMQEAL 351 400 ENSBTAP00000034522/1-1220 AKLKEEEERQ KREEEERIKR LEELEAKRKE EERLEQEKRE RKKQKEKERK ENSP00000289371/1-1220 AKLKEEEERQ KREEEERIKR LEELEAKRKE EERLEQEKRE RKKQKEKERK ENSTTRP00000009847/1-1220 AKLKEEEERQ KREEEERIKR LEELEAKRKE EERLEQEKRE RKKQKEKERK bmy_09408T0/1-1218 AKLKEEEERQ KREEEERIKR LEELEAKRKE EERLEQEKRE RKKQKEKERK BACU017689/1-1218 AKLKEEEERQ KREEEERIKR LEELEAKRKE EERLEQEKRE RKKQKEKERK 401 450 ENSBTAP00000034522/1-1220 ERLKKEGKLL TKSQREARAR AEATLKLLQA QGVEVPSKDS LPKKRPIYED ENSP00000289371/1-1220 ERLKKEGKLL TKSQREARAR AEATLKLLQA QGVEVPSKDS LPKKRPIYED ENSTTRP00000009847/1-1220 ERLKKEGKLL TKSQREARAR AEATLKLLQA QGVEVPSKDS LPKKRPIYED bmy_09408T0/1-1218 ERLKKEGKLL TKSQREARAR AEATLKLLQA QGVEVPSKDS LPKKRPIYED BACU017689/1-1218 ERLKKEGKLL TKSQREARAR AEATLKLLQA QGVEVPSKDS LPKKRPIYED 451 500 ENSBTAP00000034522/1-1220 KKKKN-PQQM ENKAVSEPVE LSAAAEVVEQ GLPEKEETPP PVEPEEEEET ENSP00000289371/1-1220 KKRKKIPQQL ESKEVSESME LCAAVEVMEQ GVPEKEETPP PVEPEEEEDT ENSTTRP00000009847/1-1220 KKKKKTPQQL ENK-VCEPME LSAAVEVVEQ GVPEKEETPP PVEPEEEEET bmy_09408T0/1-1218 KKKKKTPQQL ENK-VCEPME LSAAVEVVEQ GVPEKEETPP PVEPEEEEET BACU017689/1-1218 KKKKKTPQQL ENK-VCEPME LSAAVEVVEQ GVPEKEETPP PVEPEEEEET 501 550 ENSBTAP00000034522/1-1220 EDAGLDDWEA MASDEERET- EENTVHIEVK ENPEEEEEEE EEEEEEEESE ENSP00000289371/1-1220 EDAGLDDWEA MASDEETEKV EGNKVHIEVK ENPEEEEEEE EEEEEDEESE ENSTTRP00000009847/1-1220 EDAGLDDWEA MASDEERETE VGNTVHIEVK ENPEEEEEEE EEEEDDEESE bmy_09408T0/1-1218 EDAGLDDWEA MASDEEREA- VGNTVHIEVK ENPEEEEEEE EEEEDDEESE BACU017689/1-1218 EDAGLDDWEA MASDEERET- VGNTVHIEVK ENPEEEEEEE EEEEDDEESE 551 600 ENSBTAP00000034522/1-1220 DEEEEEGDSE GSEGEDDDEK VSDEKDAGKT LDKKPSKDVS SESEDDSDDD ENSP00000289371/1-1220 EEEEEEGESE GSEGDEEDEK VSDEKDSGKT LDKKPSKEMS SDSEYDSDDD ENSTTRP00000009847/1-1220 EEEEEEGDSE GSEGDEEDEK VSDEKDVGKT LVKKPSKEVS SESEYDSDDD bmy_09408T0/1-1218 EEEEEEGDSE GSEGDEEDEK VSDEKDAGKT LDKKPSKEVS SESEYDSDDD BACU017689/1-1218 EEEEEEGDSE GSEGDEEDEK VSDEKDVGKT LDKKPSKEVS SESEYDSDDD 601 650 ENSBTAP00000034522/1-1220 RTKEERAYDK AKRRIEKRRL EHSKNVNTEK LRAPVICVLG HVDTGKTKIL ENSP00000289371/1-1220 RTKEERAYDK AKRRIEKRRL EHSKNVNTEK LRAPIICVLG HVDTGKTKIL ENSTTRP00000009847/1-1220 RTKEERAYDK AKRRIEKRRL EHSKNVNTEK LRAPVICVLG HVDTGKTKIL bmy_09408T0/1-1218 RTKEERAYDK AKRRIEKRRL EHSKNINTEK LRAPVICVLG HVDTGKTKIL BACU017689/1-1218 RTKEERAYDK AKRRIEKRRL EHSKNINTEK LRAPVICVLG HVDTGKTKIL 651 700 ENSBTAP00000034522/1-1220 DKLRHTHVQD GEAGGITQQI GATNVPLEAI NEQTKMIKNF DRENVRIPGM ENSP00000289371/1-1220 DKLRHTHVQD GEAGGITQQI GATNVPLEAI NEQTKMIKNF DRENVRIPGM ENSTTRP00000009847/1-1220 DKLRHTHVQD GEAGGITQQI GATNVPLEAI NEQTKMIKNF NRENLRIPGM bmy_09408T0/1-1218 DKLRHTHVQD GEAGGITQQI GATNVPLEAI NEQTKMIKNF DRENVRIPGM BACU017689/1-1218 DKLRHTHVQD GEAGGITQQI GATNVPLEAI NEQTKMIKNF DRENVRIPGM 701 750 ENSBTAP00000034522/1-1220 LIIDTPGHES FSNLRNRGSS LCDIAILVVD IMHGLEPQTI ESINLLKSKK ENSP00000289371/1-1220 LIIDTPGHES FSNLRNRGSS LCDIAILVVD IMHGLEPQTI ESINLLKSKK ENSTTRP00000009847/1-1220 LIIDTPGHES FSNLRNRGSS LCDIAILVVD IMHGLEPQTI ESINLLKSKK bmy_09408T0/1-1218 LIIDTPGHES FSNLRNRGSS LCDIAILVVD IMHGLEPQTI ESINLLKSKK BACU017689/1-1218 LIIDTPGHES FSNLRNRGSS LCDIAILVVD IMHGLEPQTI ESINLLKSKK 751 800 ENSBTAP00000034522/1-1220 CPFIVALNKI DRLYDWKKSP DSDVAATLKK QKKNTRDEFE ERAKAIIVEF ENSP00000289371/1-1220 CPFIVALNKI DRLYDWKKSP DSDVAATLKK QKKNTKDEFE ERAKAIIVEF ENSTTRP00000009847/1-1220 CPFIVALNKI DRLYDWKKSP DCDVAATLKK QKKNTRDEFE ERAKAIIVEF bmy_09408T0/1-1218 CPFIVALNKI DRLYDWKKCP DSDVAVTLKK QKKNTKDEFE ERAKAIIVEF BACU017689/1-1218 CPFIVALNKI DRLYDWKKSP DSDVAATLKK QKKSTRDEFE ERAKAVVVEF 801 850 ENSBTAP00000034522/1-1220 AQQGLNAALF YENKDPRTFV SLVPTSAHTG DGMGSLICLL VELTQTMLSK ENSP00000289371/1-1220 AQQGLNAALF YENKDPRTFV SLVPTSAHTG DGMGSLIYLL VELTQTMLSK ENSTTRP00000009847/1-1220 AQQGLNAALF YENKDPRTFV SLVPTSAHTG DGMGSLIYLL VELTQTMLNK bmy_09408T0/1-1218 AQQGLNAALF YENKDPRTFV SLVPTSAHTG DGMGSLIYLL VELTQTMLSK BACU017689/1-1218 AQQGLNAALF YENKDPRTFV SLVPTSAHTG DGMGSLIYLL VELTQTMLSK 851 900 ENSBTAP00000034522/1-1220 RLAQCEELRA QVMEVKALPG MGTTIDVILI NGRLKEGDTI IVPGVEGPIV ENSP00000289371/1-1220 RLAHCEELRA QVMEVKALPG MGTTIDVILI NGRLKEGDTI IVPGVEGPIV ENSTTRP00000009847/1-1220 RLAHCEELRA QVMEVKALPG MGTTIDVILI NGRLKEGDTI IVPGVEGPIV bmy_09408T0/1-1218 RLAHCEELRA QVMEVKALPG MGTTIDVILI NGRLKEGDTI IVPGVEGPIV BACU017689/1-1218 RLAHCEELRA QVMEVKALPG MGTTIDVILI NGRLKEGDTI IVPGVEGPIV 901 950 ENSBTAP00000034522/1-1220 TQIRGLLLPP PMKELRVKNQ YEKHKEVEAA QGVKILGKDL EKTLAGLPLL ENSP00000289371/1-1220 TQIRGLLLPP PMKELRVKNQ YEKHKEVEAA QGVKILGKDL EKTLAGLPLL ENSTTRP00000009847/1-1220 TQIRGLLLPP PMKELRVKNQ YEKHKEVEAA QGVKILGKDL EKTLAGLPLL bmy_09408T0/1-1218 TQIRGLLLPP PMKELRVKNQ YEKHKEVEAA QGVKILGKDL EKTLAGLPLL BACU017689/1-1218 TQIRGLLLPP PMKELRVKNQ YEKHKEVEAA QGVKILGKDL EKTLAGLPLL 951 1000 ENSBTAP00000034522/1-1220 VAYKEDEVPV LKDELIHELK QTLNAIKLEE KGVYVQASTL GSLEALLEFL ENSP00000289371/1-1220 VAYKEDEIPV LKDELIHELK QTLNAIKLEE KGVYVQASTL GSLEALLEFL ENSTTRP00000009847/1-1220 VAYKEDEIPV LKDELIHELK QTLNAIKLEE KGVYVQASTL GSLEALLEFL bmy_09408T0/1-1218 VAYKEDEIPI LKDELIHELK QTLNAIKLEE KGVYVQASTL GSLEALLEFL BACU017689/1-1218 VAYKEDEIPI LKDELIHELK QTLNAIKLEE KGVYVQASTL GSLEALLEFL 1001 1050 ENSBTAP00000034522/1-1220 KTSEVPYAGI NIGPVHKKDV MKASVMLEHD PQYAVILAFD VRIERDAQEM ENSP00000289371/1-1220 KTSEVPYAGI NIGPVHKKDV MKASVMLEHD PQYAVILAFD VRIERDAQEM ENSTTRP00000009847/1-1220 KTSEVPYAGI NIGPVHKKDV MKASVMLEHD PQYAVILAFD VRIERDAQEM bmy_09408T0/1-1218 KTSEVPYAGI NIGPVHKKDV MKASVMLEHD PQYAVILAFD VRIERDAQEM BACU017689/1-1218 KTSEVPYAGI NIGPVHKKDV MKASVMLEHD PQYAVILAFD VRIERDAQEM 1051 1100 ENSBTAP00000034522/1-1220 ADSLGVRIFS AEIIYHLFDA FTKYRQDYKK QKQEEFKHIA VFPCKIKILP ENSP00000289371/1-1220 ADSLGVRIFS AEIIYHLFDA FTKYRQDYKK QKQEEFKHIA VFPCKIKILP ENSTTRP00000009847/1-1220 ADGLGVRIFS AEIIYHFFDX XXXXXXXXXX XXXXXXXHIA VFPCKIKILP bmy_09408T0/1-1218 ADSLGVRIFS AEIIYHLFDA FTKYRQDYKK QKQEEFKHIA VFPCKIKILP BACU017689/1-1218 ADSLGVRIFS AEIIYHLFDA FTKYRQDYKK QKQEEFKHIA VFPCKIKILP 1101 1150 ENSBTAP00000034522/1-1220 QFIFNSRDPI VMGVTVEAGQ VKQGTPMCVP SKNFVDIGIV TSIEVNHKQV ENSP00000289371/1-1220 QYIFNSRDPI VMGVTVEAGQ VKQGTPMCVP SKNFVDIGIV TSIEINHKQV ENSTTRP00000009847/1-1220 QFIFNSRDPI VMGVTVEAGQ VKQGTPMCVP SKNFVDIGIV TSIEVNHKQV bmy_09408T0/1-1218 QFIFNSRDPI VMGVTVEAGQ VKQGTPMCVP SKNFVDIGIV TSIEINHKQV BACU017689/1-1218 QFIFNSRDPI VMGVTVEAGQ VKQGTPMCVP SKNFVDIGIV TSIEVNHKQV 1151 1200 ENSBTAP00000034522/1-1220 DVAKKGQEVC VKIEPIPGES PKMYGRHFEA TDILVSKISR QSIDALKDWF ENSP00000289371/1-1220 DVAKKGQEVC VKIEPIPGES PKMFGRHFEA TDILVSKISR QSIDALKDWF ENSTTRP00000009847/1-1220 DVAKKGQEVC VKIEPIPGES PKMYGRHFEA TDIIVSKISR QSIDALKDWF bmy_09408T0/1-1218 DVAKKGQEVC VKIEPIPGES PKMYGRHFEA TDIIVSKISR QSIDALKDWF BACU017689/1-1218 DVAKKGQEVC VKIEPIPGES PKMYGRHFEA TDIIVSKISR QSIDALKDWF 1201 1250 ENSBTAP00000034522/1-1220 RDEMQKSDWQ LIVELKKVFE II ENSP00000289371/1-1220 RDEMQKSDWQ LIVELKKVFE II ENSTTRP00000009847/1-1220 RDEMQKSDWQ LIVELKKVFE II bmy_09408T0/1-1218 RDEMQKSDWQ LIVELKKVFE II BACU017689/1-1218 RDEMQKSDWQ LIVELKKVFE II