KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:44:31 2014 Check: 00 .. Name: ENSP00000355022/1-433 Len: 592 Check: 7634 Weight: 1.00 Name: ENSBTAP00000034529/1-443 Len: 592 Check: 4450 Weight: 1.00 Name: bmy_02724T0/1-282 Len: 592 Check: 6059 Weight: 1.00 Name: ENSTTRP00000007792/1-408 Len: 592 Check: 5513 Weight: 1.00 // 1 50 ENSP00000355022/1-433 MLPAGCSRRL VAELQGALDA CAQRQLQLEQ SLRVCRRLLH AW-------- ENSBTAP00000034529/1-443 MLPAECSRRL VAELRDALDS CAERQRQLEQ SLRVSRRLLR VW-------- bmy_02724T0/1-282 MLLAGSSRRL VAELRDALDS CAERQRQLER SLRVSRRLLR AWYADPGTTR ENSTTRP00000007792/1-408 TLLAGSSRRL VAELRDALDS CAERQRQLER SLRVSRRLLR AW-------- 51 100 ENSP00000355022/1-433 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000034529/1-443 ---------- ---------- ---------- ---------- ---------- bmy_02724T0/1-282 LGLRRAVRTP LRDPGPGGLA QRSLPSCGLS VLPAFPAGSE AAGLPLGQAA ENSTTRP00000007792/1-408 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000355022/1-433 ---------- ---------- --EPTGTRAL KPPPGPETNG EDPLPACTPS ENSBTAP00000034529/1-443 ---------- ---------- --EPAETPAP EPTPGSEINK EAPSSACPPS bmy_02724T0/1-282 LGAYWARAVP PGLATAALCL RREPAETLAP EPTPGPETNE EAPSAACTPS ENSTTRP00000007792/1-408 ---------- ---------- --EPAETLAP EPTPGPETNE EAPSAACIPS 151 200 ENSP00000355022/1-433 PQDLKELEFL TQALEKAVRV RRGITKAGER DKAPSLKSRS IVTSSGTTAS ENSBTAP00000034529/1-443 PQDLKELELL TQALEKAVRV RKGLSKAGEG VKARSLKSGS AST--ATKAS bmy_02724T0/1-282 PQDLKELELL TQALEKAVRV RKGISKAGEG DKAPSLKSGS IATSPATRAS ENSTTRP00000007792/1-408 PQDLKELELL TQALEKAVRV RKGISKAGEG NKAPSLKSGS IATSPATRAS 201 250 ENSP00000355022/1-433 APPHSPGQAG GHASDTRPTK GLRQTTVPAK GHPERRLLSV GDGTRVGMGA ENSBTAP00000034529/1-443 APPSTSRCTG SRAPETKPPR GVHHPWVPAK DLPGRRLLLV GDGAHMGQGA bmy_02724T0/1-282 APPSTSRRAG SRASETKPPR GIRQTRVPAK DLPERRLLSV GDQACMGQGA ENSTTRP00000007792/1-408 YPPSTSHRAG SRASETKPPR GILQTRVPTK DLPERRLLSV GDQACMGQGA 251 300 ENSP00000355022/1-433 RTPRPGAGLR DQQMAPSAAP QAPEAFTLKE KGHLLRLPAA FRKAASQNSS ENSBTAP00000034529/1-443 GANKPEAGLR DQQIVPQAAS QVPEAFTLKD KGALLRLPEA FRKAASRNAR bmy_02724T0/1-282 GATKPESGLR NEQIVLSAAS QAPEAFTLKD KG-------- ---------- ENSTTRP00000007792/1-408 GATKPKSGLR NEQIVLSAAS QAPEAFTLKD KGILLQLPEA FRKAASRNSR 301 350 ENSP00000355022/1-433 -------LWA QLSSTQTSDS TD--AAAAKT QFLQNMQTAS GGPQPRLSAV ENSBTAP00000034529/1-443 LPMCASSLWA QLSSMQTRDS VDAAAATAKT QFLQKMQTAA GLPSSMLSA- bmy_02724T0/1-282 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007792/1-408 -------LWA QLSSTQTSDS VD-AATTAKT QFLQKMQTTS GWPGPRLSAT 351 400 ENSP00000355022/1-433 EVEAEAGRLR KACSLLRLRM REELSAAPMD WMQEYRCLLT LEGLQAMVGQ ENSBTAP00000034529/1-443 ---AEVGRLQ KACSMLRLRM REELTADPKD WTQEYRSLLT LEGLQALAGQ bmy_02724T0/1-282 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007792/1-408 EVEAEVRHLQ KACLLLRLRM GEELTADPKD WMQEYRCLLT LEELQAIVGQ 401 450 ENSP00000355022/1-433 CLHRLQEL-- -RAAVAEQPP RPCPVGRPPG ASPSCGGRAE PAWSPQLLVY ENSBTAP00000034529/1-443 CLHRLQELQE LRSAVVEQPQ GPWPEG-PPR AALPCGGGAD PVWSPQLLLY bmy_02724T0/1-282 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007792/1-408 CLHRLREL-- ---------- ---------- ---------- ---------- 451 500 ENSP00000355022/1-433 SSTQELQTLA ALKLRVAVLD QQIHLEKVLM AELLPLVSAA QPQGPPWLAL ENSBTAP00000034529/1-443 SSTQELQTLA ALRLRVAMLD QQVHLEKVLM AELLPLLSEQ EPLGRPWLAL bmy_02724T0/1-282 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007792/1-408 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000355022/1-433 CR-------- ---------- ---------- ---------- ---------- ENSBTAP00000034529/1-443 CR-------- ---------- ---------- ---------- ---------- bmy_02724T0/1-282 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007792/1-408 CTXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 551 600 ENSP00000355022/1-433 ---------- ----AVHSLL CEGGARVLTI LRDEPAV--- -- ENSBTAP00000034529/1-443 ---------- ----AAHCLL CEGGQRFLTV LQDEPADRLS PP bmy_02724T0/1-282 ---------- ---------- ---------- ---------- -- ENSTTRP00000007792/1-408 XXXXXXXXXX XXXXXXHSLL CEGGQRFLTI LREDKPAD-- --