KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:44:38 2014 Check: 00 .. Name: ENSP00000383923/1-398 Len: 399 Check: 7541 Weight: 1.00 Name: ENSBTAP00000034590/1-371 Len: 399 Check: 6470 Weight: 1.00 Name: bmy_08488T0/1-374 Len: 399 Check: 707 Weight: 1.00 Name: ENSTTRP00000003812/1-398 Len: 399 Check: 405 Weight: 1.00 // 1 50 ENSP00000383923/1-398 MMWLLLTTTC LICGTLNAGG FLDLENEVNP EVWMNTSEII IYNGYPSEEY ENSBTAP00000034590/1-371 ---------- ---------- --------NP EVWMSTSEII TYNGYPSEEY bmy_08488T0/1-374 MMWLFLTTTY LICGTLNAGR FFNLEKEANP EVWMNISELI TYNGYPSEEY ENSTTRP00000003812/1-398 VMWLFLTTTY LICGTLNAGG FFNLEKEANP EVWMNISEII TYNGYPSEEY 51 100 ENSP00000383923/1-398 EVTTEDGYIL LVNRIPYGRT HARSTGPRPV VYMQHALFAD NAYWLENYAN ENSBTAP00000034590/1-371 EVTTQDGYIL SVNRIPHGRK DTKITGARPV VYLQHALFSD NTSWLENFAN bmy_08488T0/1-374 EVSTQDGYIL SVNRIPHGRR DTRSTGAQPV VYLQHALFAD SACWLQNYAN ENSTTRP00000003812/1-398 EVTTQDGYIL SVNRIPHGRR DNRSTGAQPV VYLQHALFAD GASWLENYAN 101 150 ENSP00000383923/1-398 GSLGFLLADA GYDVWMGNSR GNTWSRRHKT LSETDEKFWA FSFDEMAKYD ENSBTAP00000034590/1-371 GSLGFLLADA GYDVWMGNSR GNTWSRRHKT LSVNEEKFWA FSFHEMAKYD bmy_08488T0/1-374 GSLGFLLADA GYDVWMGNSR GNTWSRRHKT LSVNEEEFWA FSFDEMAKYD ENSTTRP00000003812/1-398 GSLGFLLADA GYDVWMGNSR GNTWSRRHKT LSVNEEEFWA FSFDEMAKYD 151 200 ENSP00000383923/1-398 LPGVIDFIVN KTGQEKLYFI GHSLGTTIGF VAFSTMPELA QRIKMNFALG ENSBTAP00000034590/1-371 LPGIIDFIVN KTGQQKLYFV GYSLGTTIGF VAFATMPELA QRIKMNFALG bmy_08488T0/1-374 LPGMIDFIVN KTGQEKLYFI GHSLGTTIGF AAFATMPELA QRIKMNFALS ENSTTRP00000003812/1-398 LPGIIDFIVN KTGQEKLYFI GHSLGTTIGF AAFATMPELA QRIKMNFALS 201 250 ENSP00000383923/1-398 PTISFKYPTG IFTRFFLLPN SIIKAVFGTK GFFLEDKKTK IASTKICNNK ENSBTAP00000034590/1-371 PVVSFKYPTG IFTRFFQLPS SAIKKLFGTK GFFLEESIGK SPSVKICNNK bmy_08488T0/1-374 PVISLKYPTG IFTSFFLLPS SSVKRIFGTK GFFLENKIRK SSSTKICNNK ENSTTRP00000003812/1-398 PVISFKYPTG IFTSFFLLPS SSVKRIFGTK GFFLGDKTGK SPSTKICNNK 251 300 ENSP00000383923/1-398 ILWLICSEFM SLWAGSNKKN MNQSRMDVYM SHAPTGSSVH NILHIKQLYH ENSBTAP00000034590/1-371 ILWVICREFM SLWAGSNKKN MNMSRMDVYM SHAPTGSSIQ NILHLKQLYH bmy_08488T0/1-374 ILQAICIEFM SLWAGSNMKN VNM------- ---------- -------LYR ENSTTRP00000003812/1-398 ILWVICIEFM SLWAGFNMKN VNVSRMDVYM SHAPTGSSIQ NILHIKQLYG 301 350 ENSP00000383923/1-398 SDEFRAYDWG NDADNMKHYN QSHPPIYDLT AMKVPTAIWA GGHDVLVTPQ ENSBTAP00000034590/1-371 SDEFRAYDWG SEAENRRHYN QSHPPLYDLT AMKVPTAIWA GGNDILITPR bmy_08488T0/1-374 SDEFRAYDWG SEAENMHHYN QSRPPLYDLT AMKVPTAIWV GGNDVLVTPQ ENSTTRP00000003812/1-398 SDEFRAYDWG SEAENMHHYN QSRPPLYDLT AMKVPTAIWV GGSDVLITPQ 351 400 ENSP00000383923/1-398 DVARILPQIK SLHYFKLLPD WNHFDFVWGL DAPQRMYSEI IALMK-AYS ENSBTAP00000034590/1-371 DVARILPQIR NLRYFKLLPD WNHFDFIWGL DAAKRVYSKI IDLMKEELK bmy_08488T0/1-374 DVTRILPQIR NLRYFNLLPD WNHFDFIWGL DAAQRVYSKI IDLMK-SFP ENSTTRP00000003812/1-398 DVTRVLPQIR NLHYFNLLPD WNHFDFIWGL DAAQRVYSKI IDLMK-SFP