KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:44:39 2014 Check: 00 .. Name: ENSBTAP00000034599/1-238 Len: 267 Check: 4488 Weight: 1.00 Name: ENSP00000301634/1-234 Len: 267 Check: 9255 Weight: 1.00 Name: ENSTTRP00000010285/1-204 Len: 267 Check: 9982 Weight: 1.00 Name: BACU011564/1-266 Len: 267 Check: 9043 Weight: 1.00 Name: bmy_13156T0/1-165 Len: 267 Check: 285 Weight: 1.00 // 1 50 ENSBTAP00000034599/1-238 ---------- ---------- ---------M SCINLPNVLP GSPSKTRGQI ENSP00000301634/1-234 ---------- ---------- ---------M SCINLPTVLP GSPSKTRGQI ENSTTRP00000010285/1-204 ---------- ---------- ---------- ---------- ---------- BACU011564/1-266 MKKHGAGTGA SLQGGGGGGS SICDLPEGTM SCINLPTVLP GSPSKTRGQI bmy_13156T0/1-165 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000034599/1-238 QVILGPMFSG KSTELMRRVR RFQVAQYKCL VIKYAKDTRY SSLFSTHDRN ENSP00000301634/1-234 QVILGPMFSG KSTELMRRVR RFQIAQYKCL VIKYAKDTRY SSSFCTHDRN ENSTTRP00000010285/1-204 ---------- --TELMRRVR RFQIAQYKCL VIKYAKDTRY SSNFSTHDRN BACU011564/1-266 QVILGPMFSG KSTELMRRVR RFQIAQYKCL VIKYAKDTRY SSNFSTHDRN bmy_13156T0/1-165 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000034599/1-238 TMEALPACLL RDVIQDAQRV AVIGIDEGQF FPDIVEFCEN MANSGKTVIV ENSP00000301634/1-234 TMEALPACLL RDVAQEALGV AVIGIDEGQF FPDIVEFCEA MANAGKTVIV ENSTTRP00000010285/1-204 TMEALPACVL RDVAQEALGV AVIGIDEGQF FPDIVEFSET MANAGKTVIV BACU011564/1-266 TMEALPACVL RDVAQEALGV AVIGIDEGQF FPDIVEFSET MANAGKTVIV bmy_13156T0/1-165 -MEALPACVL RDVAQEALGV AVIGIDEGQF FPDIVEFSET MANAGKTVIV 151 200 ENSBTAP00000034599/1-238 AALDGTFQRK AFGTILNLVP LAESVVKLTA VCMECFREAA YTKRLGVEKE ENSP00000301634/1-234 AALDGTFQRK PFGAILNLVP LAESVVKLTA VCMECFREAA YTKRLGTEKE ENSTTRP00000010285/1-204 AALDGTFQRK AFGTILNLVP LAESVVKLTA VCMECFREAA YTKRLGVEKE BACU011564/1-266 AALDGTFQRK AFGTILNLVP LAESVVKLTA VCMECFREAA YTKRLGVEKE bmy_13156T0/1-165 AALDGTFQRK AFGTILNLVP LAESVVKLTA VCMECFREAA YTKRLGVEKE 201 250 ENSBTAP00000034599/1-238 VEVIGGADKY HSVCRLCYFK KASGQPAVLD SEENKENCPM TLGKPAEAPG ENSP00000301634/1-234 VEVIGGADKY HSVCRLCYFK KASGQPAGPD ---NKENCPV -PGKPGEAVA ENSTTRP00000010285/1-204 VEVIGGADKY HSVCRLCYFK KASGQPVGLD SKENKENCPV -LGKPGEAMG BACU011564/1-266 VEVIGGADKY HSVCRLCYFK KASVQPAGLD SKENKENYPV -LGKPGEAPG bmy_13156T0/1-165 VEVIGGADKY HSVCRLCYFK KASGQPAGLD SKENKENCPV -LGKPGEAPG 251 300 ENSBTAP00000034599/1-238 VRKLFATHQI WQCSQAN ENSP00000301634/1-234 ARKLFAPQQI LQCSPAN ENSTTRP00000010285/1-204 ARKLFAPHQI LQCSPAN BACU011564/1-266 ARKLFAPHQI LQCSPAN bmy_13156T0/1-165 ARKLFAPHQI LQCSSAN