KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:44:40 2014 Check: 00 .. Name: ENSP00000329360/1-289 Len: 296 Check: 3293 Weight: 1.00 Name: ENSBTAP00000034619/1-292 Len: 296 Check: 2822 Weight: 1.00 Name: ENSTTRP00000007196/1-293 Len: 296 Check: 8362 Weight: 1.00 Name: bmy_02261T0/1-293 Len: 296 Check: 5402 Weight: 1.00 Name: BACU011617/1-269 Len: 296 Check: 3842 Weight: 1.00 // 1 50 ENSP00000329360/1-289 MAGAGRGAAV SRVQAGP--- GSPRRARGRQ QVQPLGKQRP APWPGLRSKE ENSBTAP00000034619/1-292 MAGLRRGAAA -VAPAGTAGF GRPGRPQGRR Q-QELGKQRA APRPGPRSKE ENSTTRP00000007196/1-293 MAGTRRRGAA PARTAGTAGL GSPGRPQGRR Q-QEPGKQRS APRPGPRSKE bmy_02261T0/1-293 MAGARRRAAA PAAPAGTAGL GSPGRPQGQR Q-QEPGKQRS APRPGPRSKE BACU011617/1-269 ---------- ---------- ---MRPTGPQ C-DPNSSPLS QGAPG-RGKE 51 100 ENSP00000329360/1-289 KKKVNCKPKN QDEQEIPFRL REIMRSRQEM KNPISNKKRK KAAQVTFRKT ENSBTAP00000034619/1-292 KKKVNCKPKN QDEQEIPFRL REIMRSRQEM KNPISNKKRK KEAQAAFSKT ENSTTRP00000007196/1-293 KKKVNCQPKN QDEQEIPFRL REIMRSRQEM KNPISNKKRK KEAQVAFSKT bmy_02261T0/1-293 KKKVNCKPKN QDEQEIPFRL REIMRSRQEM KNPISNKKRK KEAQVAFSKT BACU011617/1-269 KKKVNCKPKN QDEQEIPFRL REIMRSRQEM KNPISNKKRK KEAQVAFSKT 101 150 ENSP00000329360/1-289 LEKEAKGEEP DIAVPKFKQR KGESDGAYIH RMQQEAQHVL FLSKNQAIRQ ENSBTAP00000034619/1-292 LEKEAKGVEP DIAIPKFKQR KWESDRAYVR RMEQEAQHVL FLSKNQANRQ ENSTTRP00000007196/1-293 LEKEAKGVEP DIAVPKFEQK KWESDRAYVQ RMAQEAQHVL FLSKNQASRQ bmy_02261T0/1-293 LEKEAKGVEP DIAVPKFKQK KWECDRAYVQ RMEQEAQHVL FLSKNQANRQ BACU011617/1-269 LEKEAKGVEP DIAVPKFKQK KWECDRAYVQ RMGQEAQHVL FLSKNQANRQ 151 200 ENSP00000329360/1-289 PEVQAAPKEK SEQKKAKKAF QKRRLDKVRR KKEEKAADRL EQELLRDTVK ENSBTAP00000034619/1-292 PEVQAAPKKE KSER--KKAF QKRRLDKARQ RREEKAAERL EQELLQDTVK ENSTTRP00000007196/1-293 PEVHAAPKKG KSER--KKAF QKRRLVKVQQ RREEKAAERL EQELLRDTVK bmy_02261T0/1-293 PEVQAAPKKE KSER--KKAF QKRRLDKVQQ RREEKAAERL EQELLRDTVK BACU011617/1-269 PEVQAAPKKE KSER--KKAF QKRRLDKVQQ RREEKAAERL EQELLRDTVK 201 250 ENSP00000329360/1-289 FGEVVLQPPE LTARPQRSVS KDQPGRRSQM LRMLLSPGGV SQPLTASLAR ENSBTAP00000034619/1-292 FGEVVLQPPE LTAKPRMSVS RDQPGKKSLM LKKLLSPGSV SQPLTTSLAR ENSTTRP00000007196/1-293 FGEVALQPPE LTAKPRMSTS RDQPGKXXXX XXXXLSPGGV SQPLTPSLAR bmy_02261T0/1-293 FGEVALQPPE LTAKPRMSTS RDQPGKKSLM LKMLLSPGGV SQPLTTSLAR BACU011617/1-269 FGEVALQPPE LTAKPRMSTS RDQPGKKSLM LKMLLSPGGV SQPLTISLAR 251 300 ENSP00000329360/1-289 QRIVEEERER AVQAYRALKQ RQQQLHGER- ---PHLTSRK KPEPQL ENSBTAP00000034619/1-292 QRIVAEERER AVNAYRALKR LQQQRQETQS PQPPHLPPGK KPEMQL ENSTTRP00000007196/1-293 QRIVAEERER AVNAYRALKK LQQQRQGAQS PRPPHLRSGK KPKTQL bmy_02261T0/1-293 QRIVAEERER AVNAYRALKK LQQQRQGTQS PQPPHLPSGK KPKTQL BACU011617/1-269 QRIVAEERER AVNAYRALKK LQQQRQGTQS PQPPHLPSGK KPKIQL