KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:44:40 2014 Check: 00 .. Name: ENSP00000334665/1-516 Len: 516 Check: 778 Weight: 1.00 Name: ENSTTRP00000006091/1-481 Len: 516 Check: 9209 Weight: 1.00 Name: ENSBTAP00000034620/1-492 Len: 516 Check: 4683 Weight: 1.00 Name: bmy_02267T0/1-282 Len: 516 Check: 5347 Weight: 1.00 Name: BACU011612/1-447 Len: 516 Check: 1127 Weight: 1.00 // 1 50 ENSP00000334665/1-516 MPTNGLHQVL KIQFGLVNDT DRYLTAESFG FKVNASAPSL KRKQTWVLEP ENSTTRP00000006091/1-481 MPTNGLHQVL KIQFGLVNDT DRYLTAESFG FKVNASAPSL KRKQMWLLEP ENSBTAP00000034620/1-492 MPTNGLHQVL KIQFGLVNDT DRYLTAESFG FKVNASAPSL KRKQMWVLEP bmy_02267T0/1-282 MPTNGLHQVL KIQFGLVNDT DRYLTAESFG FKVNASAPSL KRKQMWVLEP BACU011612/1-447 MPTNGLHQVL KIQFGLVNDT DRYLTAESFG FKVNASAPSL KRKQMWVLEP 51 100 ENSP00000334665/1-516 DPGQGTAVLL RSSHLGRYLS AEEDGRVACE AEQPGRDCRF LVLPQPDGRW ENSTTRP00000006091/1-481 DPGQGTAVLF RSSHLGRYLS AEEDGRVACE AERPGPDCRF LVLPQPDGRW ENSBTAP00000034620/1-492 DPGEGTAVLF RSSHLGRYLS AEEDGRVACE AERPGRDCRF LVLPQPDGRW bmy_02267T0/1-282 DPGQGTAVLF RSSHLGRYLS AEEDGRVACE AERPGRDCRF LVLPQPDGRW BACU011612/1-447 DPGQGTAVLF RSSHLGRYLS AEEDGRVACE AERPGRDCRF LVLPQPDGRW 101 150 ENSP00000334665/1-516 VLRSEPHGRF FGGTEDQLSC FATAVSPAEL WTVHLAIHPQ AHLLSVSRRR ENSTTRP00000006091/1-481 ALQSEPHGRF FGGTEDQLSC FATAITPAEL WTVHLAIHPQ AHLLSVSRRR ENSBTAP00000034620/1-492 VLQSEPHGRF FGGTEDQLSC FATAITPAEL WTVHLAIHPQ AHLLSVSRRR bmy_02267T0/1-282 VLQSEPHGRF FGGTEDQLSC FATAITPAEL WTVHLAIHPQ AHLLSVSRRR BACU011612/1-447 VLQSEPHGRF FGGTEDQLSC FATAITPAEL WTVHLAIHPQ AHLLSVSRRR 151 200 ENSP00000334665/1-516 YVHLCPREDE MAADGDKPWG VDALLTLIFR SRRYCLKSCD SRYLRSDGRL ENSTTRP00000006091/1-481 YAHLCPQEDE IAADSNTPWG VDALVTLIFQ NRQYCLKSCD SRYLRSDGRL ENSBTAP00000034620/1-492 YAHLCPQEDE IAADSNTPWG VDALVTLIFQ NRQYCLKSCD SRYLRSDGRL bmy_02267T0/1-282 YAHLCPQEDE IAADSNTPWG VDALVTLIFQ NRQYCLKSCD SRYLRSDGRL BACU011612/1-447 YAHLCPQEDE IAADSNTPWG VDALVTLIFQ NRQYCLKSCD SRYLRSDGRL 201 250 ENSP00000334665/1-516 VWEPEPRACY TLEFKAGKLA FKDCDGHYLA PVGPAGTLKA GRNTRPGKDE ENSTTRP00000006091/1-481 VWEPEAHTRY TLEFKAGKLA FKDCDGRYLA PVGPTGTLRA GRNTRPGKDE ENSBTAP00000034620/1-492 VWEPEARARY TLEFKAGKLA FKDCDGHYLA PVGPAGTLRA GRNTRPGKDE bmy_02267T0/1-282 VWEPEARARY TLEFKAGKLA FKDCDGRYLA PVGPAGTLRA GRNTRPGKDE BACU011612/1-447 VWEPEARARY TLEFKAGKLA FKDCDGHYLA PVGPAGTLRA GRNTRPGKDE 251 300 ENSP00000334665/1-516 LFDLEESHPQ VVLVAANHRY VSVRQGVNVS ANQDDELDHE TFLMQIDQET ENSTTRP00000006091/1-481 LFDLEESHPQ VVLVAANHRY VSVRQGVPAE PW-------- ---------- ENSBTAP00000034620/1-492 LFDLEESHPQ VVLVAANHRY VSVRQGVNVS ANQDEELDHE TFLMQIDQET bmy_02267T0/1-282 LFDLEESHPQ VVLVAANHRY VSVRQGNE-- ---------- ---------- BACU011612/1-447 LFDLEESHPQ VVLVAANHRY VSVRQGVNVS ANQDEELDHE TFLMQIDRET 301 350 ENSP00000334665/1-516 KKCTFYSSTG GYWTLVTHGG IHATATQVSA NTMFEMEWRG RRVALKASNG ENSTTRP00000006091/1-481 ---------A GQFTLKAPGS VHPG---VSE NTMFEMEWRG RRVALKASNG ENSBTAP00000034620/1-492 KKCTFYSSTG GYWTLVTHGG IQATATQVSE NTMFEMEWRG RRVALKASNG bmy_02267T0/1-282 ---------- ---------- ---------- ---------- ---------- BACU011612/1-447 KKCTFYSSTG GYWTLVTHGG IQATATQVSA NTMFEMEWRG RRVALKASNG 351 400 ENSP00000334665/1-516 RYVCMKKNGQ LAAISDFVGP PPRPAWTGKV AGGAAQQTLS PPGKDEEFTL ENSTTRP00000006091/1-481 RYVCMKKNGQ LAAISDFVGQ V--RAWIGEV ---KAPQPFS PSGEDEEFIL ENSBTAP00000034620/1-492 RYVCMKKNGQ LAAISDFV-- ---------- ---------- --GEDEEFTL bmy_02267T0/1-282 ---------- ---------- ---------- ---------- ---------- BACU011612/1-447 RYVCMKKNGQ LAAISDFV-- ---------- ---------- --GEDEEFIL 401 450 ENSP00000334665/1-516 KLINRPILVL RGLDGFVCHH RGSNQLDTNR SVYDVFHLSF SDGAYRIRGR ENSTTRP00000006091/1-481 KLINRPILVL RGLDGFVCHR RGSNQLDTNR SVYDVFHLSF SDGAYQIRGR ENSBTAP00000034620/1-492 KLINRPILVL RGLDGFVCHR RGSNQLDTNR SVYDVFHLSF SDGAYQIRGR bmy_02267T0/1-282 ---------- ---------- ---------- ---------- ---------- BACU011612/1-447 KLINRPILVL RGLDGFVCHR RGSNQLDTNR SVYDVFHLSF SDGAYQIRGA 451 500 ENSP00000334665/1-516 DGGFWYTGSH GSVCSDGERA EDFVFEFRER GRLAIRARSG KYLRGGASGL ENSTTRP00000006091/1-481 GGGFWHTGSH GSVCSDGERA EDFLFEFRER GRLAIRARSG KYLRGGASGL ENSBTAP00000034620/1-492 GGGFWHTGSH GSVCSDGERA EDFLFEFRER GRLAIRARSG KYLRGGASGL bmy_02267T0/1-282 ---------- ---------- ---------- ---------- --------GA BACU011612/1-447 G--------- ---------- ---------- ---------- --VRDGSGGS 501 550 ENSP00000334665/1-516 LRADADAPAG TALWEY ENSTTRP00000006091/1-481 LRADADAPAG FALWEY ENSBTAP00000034620/1-492 LRADADAPAG VALWEY bmy_02267T0/1-282 AR-------- ------ BACU011612/1-447 ARSWGPERVG GA----