KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:44:40 2014 Check: 00 .. Name: ENSP00000269394/1-723 Len: 784 Check: 538 Weight: 1.00 Name: ENSBTAP00000034629/1-703 Len: 784 Check: 5961 Weight: 1.00 Name: ENSTTRP00000011073/1-691 Len: 784 Check: 1590 Weight: 1.00 Name: bmy_21501T0/1-762 Len: 784 Check: 4109 Weight: 1.00 Name: BACU019843/1-703 Len: 784 Check: 1556 Weight: 1.00 // 1 50 ENSP00000269394/1-723 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000034629/1-703 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011073/1-691 ---------- ---------- ---------- ---------- ---------- bmy_21501T0/1-762 MVALKFILHF KEPKVWEGVV VNHWKSSIGV KLTNLVLATP QWLNYAGAGR BACU019843/1-703 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000269394/1-723 ---------M SLLKERKPKK PHYIPRPPGK PFKYKCFQCP FTCNEKSHLF ENSBTAP00000034629/1-703 ---------M SLLKERKPKK PHYIPRPPGK PFKYKCFQCP FTCNEKSHLF ENSTTRP00000011073/1-691 ---------M SLLKERKPKK PHYIPRPPGK PFKYKCFQCP FTCNEKSHLF bmy_21501T0/1-762 AQTPNHRGKM SLLKERKPKK PHYIPRPPGK PFKYKCFQCP FTCNEKSHLF BACU019843/1-703 ---------M SLLKERKPKK PHYIPRPPGK PFKYKCFQCP FTCNEKSHLF 101 150 ENSP00000269394/1-723 NHMKYGLCKN SITLVSEQDR VPKCPKSNSL DPKQTNQPDA TAKPASSKSV ENSBTAP00000034629/1-703 NHMKYGLCKN SITLVSEQDR VPKCSKPNSS DPKQTNQPDP VVKPTSSKPV ENSTTRP00000011073/1-691 NHMKYGLCKN SITLVSEQDR IPKCSKPNSS DPKPTSQSDP MAKPTSSKPV bmy_21501T0/1-762 NHMKYGLCKN SITLVSEQDR IPKCSKPNSS DPKPTNQSDP MAKPTSSKHV BACU019843/1-703 NHMKYGLCKN SITLVSEQDR IPKCSKPNSS DPKPTNQSDP MAKPTSSKPV 151 200 ENSP00000269394/1-723 ANGLSAFDSK LQHSSAREDI KENLELQARG THRCLGQKPA LHRASPCKSP ENSBTAP00000034629/1-703 PSGLSHLDAK LQHSLAKDDI KENLDLHARG PHRCLGQKPT PHKEAAPPSP ENSTTRP00000011073/1-691 PSGLSHLDTK LQHGLAKDDI KENVDLHACG PHRCPGQKPT LHKETAPLSP bmy_21501T0/1-762 PSGLSHLDAK LQHGLAKDDI KENVDLHACG PHRCPGQKPT LHKEAAPLSP BACU019843/1-703 PSGLSHLDAK LQHGLAKDDI KENVDLHACG PHRCPGQKPT LHKEAAPLSP 201 250 ENSP00000269394/1-723 APEAALGAQP ALEGAARPSA FVPVGEHRLK GPDNAEAPET LALHNPTAKA ENSBTAP00000034629/1-703 APEAAVGTQP VLEGAVRPSA FVPVGEHRLK GQELTETPEA LALTHAPAKA ENSTTRP00000011073/1-691 APEATAGTQP VLEGTTRPSA FMPVGEHRLK GQELTEAPEA LTLTQPPAKA bmy_21501T0/1-762 APEATAGTQP VLEGATRPSA FIPVGEHRLK GQELTEAPEA LTLTQPPAKA BACU019843/1-703 APEATAGTQP VLEGATRPSA FIPVGEHRLK GQELTEAPEA LTLTQPPAKA 251 300 ENSP00000269394/1-723 VSFHTKSAFH TPGYPWKAGS PFLPPEFPHK ISSTKGLGAI SPYMHPTIPE ENSBTAP00000034629/1-703 SSFHTKSAFH APGYPWRAGS PFLTPEFPHK IPSTKGFGAT SPYVHPSITE ENSTTRP00000011073/1-691 ASFHTKSAFH APGYAWKAGS PFLTPEFPHK IPSTKGFGAT SPYVHPTIAE bmy_21501T0/1-762 ASFHTKSAFH APGYPWKAGS PFLTPEFPHK IPSTKGFGAT SPYVHPTIAE BACU019843/1-703 ASFHTKSAFH APGYPWKAGS PFLTPEFPHK IPSTKGFGAT SPYVHPTIAE 301 350 ENSP00000269394/1-723 YPPHFYTEHG LATIYSPYLL AGSSPECDAP LLSVYGTQDP RHFLPHPGPI ENSBTAP00000034629/1-703 YPPHFYTEHG LATIYSPYLL AGNSPECDSP LLSVYGAQDQ RHFLPHPGPI ENSTTRP00000011073/1-691 YPPHFYTEHG LATIYSPYLL AGNSPECDSP LLSIYGAQDQ RHFLPHPGPI bmy_21501T0/1-762 YPPHFYTEHG LATIYSPYLL AGNSPECDSP LLSVYGAQDQ RHFLPHPGPI BACU019843/1-703 YPPHFYTEHG LATIYSPYLL AGNSPECDSP LLSVYGAQDQ RHFLPHPGPI 351 400 ENSP00000269394/1-723 PKHLAPSPAT YDHYRFFQQY PSNLPIPYGF YRPESAFSSY GLRLPPVTGL ENSBTAP00000034629/1-703 PKHLNPAPST YDHYRFFQQY HSSLPIPYGF YRPESAFSSY GLRLPPVAGI ENSTTRP00000011073/1-691 PKHLNPAPST YDHYRFFQQY HSNLPIPYGF YRPESAFSSY GLRPPPVAGM bmy_21501T0/1-762 PKHLNPAPST YDHYRFFQQY HSNLPIPYGF YRPESAFSSY GLRPPPVAGI BACU019843/1-703 PKHLNPAPSA YDHYRFFQQY HSNLPIPYGF YRPESAFSSY GLRPPPVAGI 401 450 ENSP00000269394/1-723 TRDQSSHLLE EATLVYPASS PSRLNPSDPN RKHVEFE--S PIPEAKDSSK ENSBTAP00000034629/1-703 SRDQSSHLLE EAALGYQALS PSKLNSSNSH KKHTELEKQS PTPEAKEPSK ENSTTRP00000011073/1-691 SQDQSSHLLE EAALAYPAWS PSKLNSSNSH KKHTEFEKES PTPEAKDLSR bmy_21501T0/1-762 SQDQSSHLLE EAALAYPAWS PSKLTSSNSH KKHTEFEKES PTPEAKDLSK BACU019843/1-703 SQDQSSHLLE EAALAYPAWS PSKLTSSNSH KKHTEFEKES PTPEAKDLSK 451 500 ENSP00000269394/1-723 AGQRDTEGSK MSPRAGSAAT GSPGRPSPTD FMQTSQTCEG LYDLSNKAAS ENSBTAP00000034629/1-703 DGQRDTEGTK MSPRAGSAAT GSPGRPSPTN FTQTSQPCAG LCGLSDAPAS ENSTTRP00000011073/1-691 DGQRDTEGTK MSPRAGSAAT GSPGRPSPTN FTQTSQPCAG LCSLLDMPAS bmy_21501T0/1-762 DGQRDTEGTK MSPRAGSAAT GSPGRPSPTN FTQTSQPYDG LYSLLDMPAS BACU019843/1-703 DGQRDTEGTK MSPRAGSAAT GSPGRPSPTN FTQTSQPCAG LYSLLDMPAS 501 550 ENSP00000269394/1-723 SALGRLYPPE QSLTAFRPVK KSTECLPAQA AETTAESPVS LNVVNGDPPA ENSBTAP00000034629/1-703 SAPGRIPPPE QGLAAFKPIK KNTEHPHSQA PENRAVSPKS LEALSTDAPT ENSTTRP00000011073/1-691 GAPGSLHPPE QSLTAFKPVK KNTERPHSQA PENRAASPES LEAVNADALA bmy_21501T0/1-762 GAPGSLHPPE QSLTAFKPVK KNTERPHSQA PENRAASPES LEAMNEDALA BACU019843/1-703 GAPGSLHPPE QSLTAFKPVK KNTERPHSQA PENRAASPES LEAMNEDALA 551 600 ENSP00000269394/1-723 PTGSASLVSE AAPSSPDDSS GMGPLNLSKK SEINLAATHE PTYQGSPQAE ENSBTAP00000034629/1-703 QLGSL----E AAPSSPEDGS RAAPLNLSTK PEAEPAATCS PAHGG----- ENSTTRP00000011073/1-691 QMGSP----E AAPSSPEDDS RAAPLNLSTK PEAEPATTHH --YGE----- bmy_21501T0/1-762 QMGSL----E AAPSSPEDGS RAAPLNLSTK PEAEPATTRT TAYGE----- BACU019843/1-703 QMGSL----D AAPSSPEDGS RAAPLNLSTK PEAEPAATHT TAYGE----- 601 650 ENSP00000269394/1-723 TASFSELQDL PLNLSVKDPC NTQAPRPAFP GRPRAAEPAA AVPQKTGTEG ENSBTAP00000034629/1-703 ---FVEPQDA PLNLSVKDPC NALTSRPSVC SPPRGAEPAA A-PTPSPTQQ ENSTTRP00000011073/1-691 ----VEPQDA PLNLSV-DPC NALTSRPSVR SRPRGAEPAA A-------VQ bmy_21501T0/1-762 ---FVEPQDA PLNLSVKDPC NALTSRPSVR SRPRGAEPAA A-PTPTPAPQ BACU019843/1-703 ---FVEPQDA PLNLSVKDPC NALTSRPSVR SRPRGAEPAA A-PTPTPAPQ 651 700 ENSP00000269394/1-723 SEDGPSHPET KPGSLDGDGA PPTGPGEEAP DACAVDSSEE QKQTAAVALC ENSBTAP00000034629/1-703 REPASSGDGP DPSSVEAPVP SPTGKAQDIR AA----DSDE QKQTAAVALC ENSTTRP00000011073/1-691 SETASSGAGP DP--LCGDLR PPGGKAQDTR SA----DSDE QKQTAAVALC bmy_21501T0/1-762 SETASSGGGP DPSSAEAPVP SPAGKAQDAR SA----DSDE QKQTAAVALC BACU019843/1-703 SETASSGGGP DPSSAEAPVP SPAGKAQDAR SA----DSDE QKQTAAVALC 701 750 ENSP00000269394/1-723 QLAAYSPRNI RVGDGDAAAP EPACRQDTPT LSSMESQEAQ CDLRPKGQKR ENSBTAP00000034629/1-703 QLAAYSPGNV -----EPAAQ EPTCRPDAPT PRAPESQEAQ CDLRPKGQKR ENSTTRP00000011073/1-691 QLAAYSPGNV -----EPAAQ EPACQVDVPT PRAPESQEAQ CDLRPKGQKR bmy_21501T0/1-762 QLAAYSPGNV -----EPAAQ EPACQPDAPT PRAPESQEAQ CDPRPKGQKR BACU019843/1-703 QLAAYSPGNV -----EPAAQ EPACQPDAPT PRAPESQEAQ CDLRPKGQKR 751 800 ENSP00000269394/1-723 TSLRDAGKSQ QGAKKAKLQD TARVFTLRRR ARVS ENSBTAP00000034629/1-703 TSPREVGKGQ QGSKKAKPSD TARVFTLRKR TRVS ENSTTRP00000011073/1-691 TSPRDAGKAQ QGTKKPKPSD TARVFTLRKR TRVS bmy_21501T0/1-762 TSPRDAGKAQ QGTKKAKPSD TARVFTLRKR TRVS BACU019843/1-703 TSPRDAGKAQ QGTKKAKPSD TARVFTLRKR TRVS