KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:44:43 2014 Check: 00 .. Name: bmy_15237T0/1-532 Len: 591 Check: 3716 Weight: 1.00 Name: ENSTTRP00000004911/1-573 Len: 591 Check: 2881 Weight: 1.00 Name: BACU008441/1-569 Len: 591 Check: 7120 Weight: 1.00 Name: ENSP00000269095/1-552 Len: 591 Check: 8090 Weight: 1.00 Name: ENSBTAP00000034684/1-552 Len: 591 Check: 9078 Weight: 1.00 // 1 50 bmy_15237T0/1-532 ---MPGSWWG GRC------- ---------- --LVPQGSW- ---------- ENSTTRP00000004911/1-573 ---MPVAATN SES------- -------AMQ QVLDNLGSLP NATGAAELDL BACU008441/1-569 MAGSPGCGAS LEDISLGSSE EAELRREAMQ QVLDNLGSLP NATGAAELDL ENSP00000269095/1-552 ---MPVAATN SET------- -------AMQ QVLDNLGSLP SATGAAELDL ENSBTAP00000034684/1-552 ---MPVAATN SET------- -------AMQ QVLDNLGSLP NATGAAELDL 51 100 bmy_15237T0/1-532 ----GSIKFH LFRPHPQA-- ---------- ---------- HERLEETKLE ENSTTRP00000004911/1-573 IFLRGIMESP IVRSLAKVIM VLFIQISFVL RRFMPKYFEA HERLEETKLE BACU008441/1-569 IFLRGIMESP IVRSLAKA-- ---------- ---------- HERLEETKLE ENSP00000269095/1-552 IFLRGIMESP IVRSLAKA-- ---------- ---------- HERLEETKLE ENSBTAP00000034684/1-552 IFLRGIMESP IVRSLAKA-- ---------- ---------- HERLEETKLE 101 150 bmy_15237T0/1-532 AVRDNNLELV QEILRDLAQL AERSSTAAEL ARILQEPHFQ SLLETHDSVA ENSTTRP00000004911/1-573 AVRDNNLELV REILRDLARL AERSSAAAEL VRILQEPHFX XXXXXXXXXX BACU008441/1-569 AVRDNNLELV QEILRDLAQL AEQSSTAAEL ARILQEPHFQ SLLETHDSVA ENSP00000269095/1-552 AVRDNNLELV QEILRDLAHV AEQSSTAAEL AHILQEPHFQ SLLETHDSVA ENSBTAP00000034684/1-552 AVRDNNLELV QEILRDLAQL AEQSSTAAEL ARILQEPHFQ SLLETHDSVA 151 200 bmy_15237T0/1-532 SKTYETPPPS PGLDPTFSXQ PLPPDAVRMV GIRKTAGEHL GVTFRVEGGE ENSTTRP00000004911/1-573 SKTYETPPPS PGLDPTFSNQ PV-PDAVRMV GVRKTAGEHL GVTFRVEGGE BACU008441/1-569 SKTYETPPPS PGLDPTFSNQ PLPPDAVRMV GIRKTAGEHL GVTFRVEGGE ENSP00000269095/1-552 SKTYETPPPS PGLDPTFSNQ PVPPDAVRMV GIRKTAGEHL GVTFRVEGGE ENSBTAP00000034684/1-552 SKTYETPPPS PGLDPTFSNQ PVPPDAVRMV GIRKTAGEHL GVTFRVEGGE 201 250 bmy_15237T0/1-532 LVIARILHGG MVAQQGLLHV GDIIKEVNGQ PVGSDPRALQ ELLRNSSGSV ENSTTRP00000004911/1-573 LVIARILHGG MVAQQGLLHV GDIIKEVNGQ PVGSDPRALQ ELLRNASGSV BACU008441/1-569 LVIARILHGG MVAQQGLLHV GDIIKEVNGQ PVGSDPRALQ ELLRNSSGSV ENSP00000269095/1-552 LVIARILHGG MVAQQGLLHV GDIIKEVNGQ PVGSDPRALQ ELLRNASGSV ENSBTAP00000034684/1-552 LVIARILHGG MVAQQGLLHV GDIIKEVNGQ PVGSDPRALQ ELLRSASGSV 251 300 bmy_15237T0/1-532 ILKILPSYQE PHLPRQVFVK CHFDYDPTRD SLIPCKEAGL RFNAGDLLQI ENSTTRP00000004911/1-573 ILKILPSYQE PHLPRQVFVK CHFDYDPARD SLIPCKEAGL RFNAGDLLQI BACU008441/1-569 ILKILPSYQE PHLPRQVFVK CHFDYDPARD SLIPCKEAGL HFNAGDLLQI ENSP00000269095/1-552 ILKILPSYQE PHLPRQVFVK CHFDYDPARD SLIPCKEAGL RFNAGDLLQI ENSBTAP00000034684/1-552 ILKILPSYQE PHLPRQVFVK CHFDYDPTRD SLIPCKEAGL RFSAGDLLQI 301 350 bmy_15237T0/1-532 VNQDDANWWQ ACHVEGGSAG LIPSQLLEEK RKAFVKRDLE LTPTSGTLCG ENSTTRP00000004911/1-573 VNQDDANWWQ ACHVEGGSAG LIPSQLLEEK RKAFVKRDLE LTPTSGTLCG BACU008441/1-569 VNQDDANWWQ ACHVEGGSAG LIPSQLLEEK RKAFVKRDLE LTPTSGTLCG ENSP00000269095/1-552 VNQDDANWWQ ACHVEGGSAG LIPSQLLEEK RKAFVKRDLE LTPNSGTLCG ENSBTAP00000034684/1-552 VNQDDANWWQ ACHVEGGSAG LIPSQLLEEK RKAFVKRDLE LTPTSGTLCG 351 400 bmy_15237T0/1-532 SISGKKKKRM MYLTTKNAEF DRHELLIYEE VARMPPFRRK TLVLIGAQGV ENSTTRP00000004911/1-573 SISGKKKKRM MYLTTKNAEF DRHELLIYEE VARMPPFRRK TLVLIGAQGV BACU008441/1-569 SISGKKKKRM MYLTTKNAEF DRHELLIYEE VARMPPFRRK TLVLIGAQGV ENSP00000269095/1-552 SLSGKKKKRM MYLTTKNAEF DRHELLIYEE VARMPPFRRK TLVLIGAQGV ENSBTAP00000034684/1-552 SLSGKKKKRM MYLTTKNAEF DRHELLIYEE VARMPPFRRK TLVLIGAQGV 401 450 bmy_15237T0/1-532 GRRSLKNKLI MWDPDRYGTT VPYTSRRPKD SEREGQGYSF VSRAEMEADI ENSTTRP00000004911/1-573 GRRSLKNRLI MWDPDRYGTT VPYTSRRPKD SEREGQGYSF VSRAEMEADI BACU008441/1-569 GRRSLKNKLI MWDPDRYGTT VPYTSRRPKD SEREGQGYSF VSRAEMEADI ENSP00000269095/1-552 GRRSLKNKLI MWDPDRYGTT VPYTSRRPKD SEREGQGYSF VSRGEMEADV ENSBTAP00000034684/1-552 GRRSLKNKLI MWDPDRYGTT VPYTSRRPKD SEREGQGYSF VSRAEMEADI 451 500 bmy_15237T0/1-532 RAGRYLEHGE YEGNLYGTRI DSIRGVVAAG RVCVLDVNPQ AVKALRTAEF ENSTTRP00000004911/1-573 RAGRYLEHGE YEGNLYGTRI DSIRGVVAAG RVCVLDVNPQ AVKVLRTAEF BACU008441/1-569 RAGRYLEHGE YEGNLYGTRI DSIRGVVAAG RVCVLDVNPQ AVKVLRTAEF ENSP00000269095/1-552 RAGRYLEHGE YEGNLYGTRI DSIRGVVAAG KVCVLDVNPQ AVKVLRTAEF ENSBTAP00000034684/1-552 RAGRYLEHGE YEGNLYGTRI DSIRGVVAAG RVCVLDVNPQ AVKVLRTAEF 501 550 bmy_15237T0/1-532 VPYVVFIEAP DFETLRAMNR TALESGVSTK QLTEADLRRT VEESSRIQRG ENSTTRP00000004911/1-573 VPYVVFIEAP DFETLRAMNR TALESGVSTK QLTEADLRRT VEESSRIQRG BACU008441/1-569 VPYVVFIEAP DFETLRAMNR TALESGVSTK QLTEADLRRT VEESSRIQRG ENSP00000269095/1-552 VPYVVFIEAP DFETLRAMNR AALESGISTK QLTEADLRRT VEESSRIQRG ENSBTAP00000034684/1-552 VPYVVFIEAP DFETLRAMNR AALESGVSTK QLTEADLRRT VEESSRIQRG 551 600 bmy_15237T0/1-532 YGHYFDLSLV NSNLERTFRE LQAALEKLRT EPQWVPVSWV Y ENSTTRP00000004911/1-573 YGHYFDLSLV NRNLERTFRE LQAALEKLRT EPQWVPVSWV Y BACU008441/1-569 YGHYFDLSLV NSNLERTFHE LQAALEKLRT EPQWVPVSWV Y ENSP00000269095/1-552 YGHYFDLCLV NSNLERTFRE LQTAMEKLRT EPQWVPVSWV Y ENSBTAP00000034684/1-552 YGHYFDLCLV NSNLERTFRE LQAAMEKLRT EPQWVPVSWV Y