KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:44:46 2014 Check: 00 .. Name: ENSP00000302276/1-286 Len: 332 Check: 2229 Weight: 1.00 Name: ENSBTAP00000034708/1-288 Len: 332 Check: 4253 Weight: 1.00 Name: ENSTTRP00000005944/1-283 Len: 332 Check: 9061 Weight: 1.00 Name: bmy_11366T0/1-330 Len: 332 Check: 3562 Weight: 1.00 Name: BACU008405/1-330 Len: 332 Check: 3880 Weight: 1.00 // 1 50 ENSP00000302276/1-286 ---------- ---------- ---------- ---------- ------MMAT ENSBTAP00000034708/1-288 ---------- ---------- ---------- ---------M KDWEQKKVAS ENSTTRP00000005944/1-283 ---------- ---------- ---------- ---------- ------KVAT bmy_11366T0/1-330 MAAAALVKIC WVARVFLKIL PRDLGFYYLK QVSLVKRHLL KDLEQKKVAT BACU008405/1-330 MAAAALVKIC WVARVFLKIL PRDLGFYYLK QVSLVKRHLL KDLEQKKVAT 51 100 ENSP00000302276/1-286 PNQTACNAES PVALEEAKTS GAPGSPQTPP ERHDSGGSLP LTPRMESHSE ENSBTAP00000034708/1-288 PNQPP----- PAALEEAKIS GTCGSPRTSP EPHDPGGSQP LTPRMESHSE ENSTTRP00000005944/1-283 PNQTNC-TES PAALEEAKTS RVPGSPKTSP EPHDPGGSLP LTPRVESHSE bmy_11366T0/1-330 PNQTNCNTES PAALEEAKIS CVPGSPKTSP EPHDPGGSLP LTPRMESHSE BACU008405/1-330 PNQTNCNTES PAALEEAKIS RVPGSPKTSP EPHDPGGSLP LTPRMESHSE 101 150 ENSP00000302276/1-286 DEDLAGAVGG LGWNSRSPRT QSPGGCSAEA VLARKKHRRR PSKRKRHWRP ENSBTAP00000034708/1-288 EEDRPGAGGG LGWNGRSPRT QSLGACSAEA MLARKKHRRR PSKRKRHWRP ENSTTRP00000005944/1-283 EEDPPGS--G LGWNGRGPRA QSPGRCSVEA VLARKKHRRR PSKRKRHWRP bmy_11366T0/1-330 EEDPPGS--G LGWNGRGPRA QSPGGCSVEA VLARKKHRRR PSKRKRHWRP BACU008405/1-330 EEDPPGS--G LGWNGRGPRA QSPGSCSVEA VLARKKHRRR PSKRKRHWRP 151 200 ENSP00000302276/1-286 YLELSWAEKQ QRDERQSQRA SRVREEMFAK GQPVAPYNTT QFLMNDRDPE ENSBTAP00000034708/1-288 YLELSWAEKQ QRDERQSQRA SRVREEMFAK GQPVAPYNTT QFLMNDRDPE ENSTTRP00000005944/1-283 YLELSWAEKQ QRDERQSQRA SRVREEMFAK GQPVAPYNTT QFLMNDRDPE bmy_11366T0/1-330 YLELSWAEKQ QRDERQSQRA SRVREEMFAK GQPVAPYNTT QFLMNDRDPE BACU008405/1-330 YLELSWAEKQ QRDERQSQRA SRVREEMFAK GQPVAPYNTT QFLMNDRDPE 201 250 ENSP00000302276/1-286 EPNLDVPHGI SHPGSSGESE AGDSDGRGRA HGEFQRKDFS ETYERFHTES ENSBTAP00000034708/1-288 EPNLDVPQGA SHPGSSGESE AGDSDGQGRA RGEFQQKDFS EAYERYHTES ENSTTRP00000005944/1-283 EPNLDVPQGA SHPGSSGESE AGDSDSRGRA HGEFQQRDFS EAYERYHTES bmy_11366T0/1-330 EPNLDVPQGA SHPGSSGESE AGDSDSRGRA HGEFQQRDFS EAYERYHTES BACU008405/1-330 EPNLDVPQGA SHPGSSGESE AGDSDSRGRA HGEFQQRDFS EAYERYHTES 251 300 ENSP00000302276/1-286 LQGRSKQELV RDYLELEKRL SQAEEETRRL QQLQACTGQQ SCRQVEELAA ENSBTAP00000034708/1-288 LQGRSKEELV RDYLDLERRL SQAEEEMRRL RQLRGCTNWR PCYQVEELAA ENSTTRP00000005944/1-283 LQGRSKQELV RDYLDLERRL SQAEEETRRL QQLRGCTSQQ PCRQVEELAA bmy_11366T0/1-330 LQGRSKQELV RDYLDLERRL SQAEEETRRL QQLQGCTSQR PCRQVEELAA BACU008405/1-330 LQGRSKQELV RDYLDLERRL SQAEEETRRL QQLQGCTSQR PCRQVEELAA 301 350 ENSP00000302276/1-286 EVQRLRTENQ RLRQENQMWN REGCRCDEEP GT ENSBTAP00000034708/1-288 EVERLRTENQ RLRQENEMWN REGGRRGGQP GS ENSTTRP00000005944/1-283 EVERLRTENQ RLRQENEMWN REGGRRGGER GT bmy_11366T0/1-330 EVERLRTENQ RLRQENEMWN REGGRRGGEP GT BACU008405/1-330 EVERLRTENQ RLRQENEMWN REGGRRGGEP GT