KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:44:51 2014 Check: 00 .. Name: bmy_20771T0/1-463 Len: 661 Check: 5781 Weight: 1.00 Name: BACU006447/1-423 Len: 661 Check: 9789 Weight: 1.00 Name: ENSBTAP00000034827/1-651 Len: 661 Check: 4254 Weight: 1.00 Name: ENSP00000468304/1-628 Len: 661 Check: 5659 Weight: 1.00 Name: ENSTTRP00000007034/1-631 Len: 661 Check: 6989 Weight: 1.00 // 1 50 bmy_20771T0/1-463 ---------- ---------- MTAYLAGKES RSQIALTSGP GAGSGE--AD BACU006447/1-423 ---------- ---------- ---MFDGYDS CSEDTSSSSS SEESEEEVAP ENSBTAP00000034827/1-651 LVSSALKTEH SSPSERQRRD SFGMFDGYDS CSEDTSSSSS SEESEEEAAP ENSP00000468304/1-628 ---------- ---------- ---MFDGYDS CSEDTSSSSS SEESEEEVAP ENSTTRP00000007034/1-631 ---------- ---------- ---MFDGYDS CSEDTSSSSS SEESEEEVAP 51 100 bmy_20771T0/1-463 LPEGL----- ---------- ---------- ---------- ---------- BACU006447/1-423 LPSNLPIIKN NGQVYTYPDG KSGMGEYEV- ---------- ---------- ENSBTAP00000034827/1-651 LPSSLPIIKN NGQVYTYPDG KSGMATCEMC GMVGVRDAFY SKTKRFCSVS ENSP00000468304/1-628 LPSNLPIIKN NGQVYTYPDG KSGMATCEMC GMVGVRDAFY SKTKRFCSVS ENSTTRP00000007034/1-631 LPSNLPIIKN NGQVYTYPDG KSGMATCEMC GMVGVRDAFY SKTKRFCSVS 101 150 bmy_20771T0/1-463 ---------- ---------A EPQPYR---- QEQMSLSATF SYTNPDCREQ BACU006447/1-423 ----YTSA-- --------QG KPPTKKAKVL QKQPLVAKLA AYAQYQATLQ ENSBTAP00000034827/1-651 CSRSYSSNSK KASILARLQG KPPTKKAKVL QKQPLVAKLA AYAQYQATLQ ENSP00000468304/1-628 CSRSYSSNSK KASILARLQG KPPTKKAKVL QKQPLVAKLA AYAQYQATLQ ENSTTRP00000007034/1-631 CSRSYSSNSK KASILARLQG KPPTKKAKVL QKQPLVAKLA AYAQYQATLQ 151 200 bmy_20771T0/1-463 NITSPTK--- ---------- ---------- --------AP MGTCWGDISE BACU006447/1-423 NQAKTKS--- ---------- ---------- ---------- ---------- ENSBTAP00000034827/1-651 NQAKTKS--- AVSTEGFNWG NYINSNSFIA APVTCFKHAP MGTCWGDISE ENSP00000468304/1-628 NQAKTKA--- AVSMEGFSWG NYINSNSFIA APVTCFKHAP MGTCWGDISE ENSTTRP00000007034/1-631 NQAKTKSGNM AVSMEGFSWG NYISSNSFIA APVTCFKHAP MGTCWGDISE 201 250 bmy_20771T0/1-463 NVRVEVPNTD CSLPTKVFWI AGIVKLAGYN ALLRYEGFEN DSGLDFWCNI BACU006447/1-423 ---------- ---------- -------GYN ALLRYEGFEN DSGLDFWCNI ENSBTAP00000034827/1-651 NVRVEVPNTD CSLPTKVFWI AGIVKLAGYN ALLRYEGFEN DSGLDFWYSI ENSP00000468304/1-628 NVRVEVPNTD CSLPTKVFWI AGIVKLAGYN ALLRYEGFEN DSGLDFWCNI ENSTTRP00000007034/1-631 NVRVEVPNTD CSLPTKVFWI AGIVKLAGYN ALLRYEGFEN DSGLDFWCNI 251 300 bmy_20771T0/1-463 CGSDIHPVGW CAASGKPLVP PRTIQHKYTN WKAFLVKRLT GAKTLPPDFS BACU006447/1-423 CGSDIHPVGW CAASGKPLVP PRTIQHKYTN WKAFLVKRLT GAKTLPPDFS ENSBTAP00000034827/1-651 CGSDIHPVGW CAASGKPLVP PRTIQHKYTN WKAFLVKRLT GAKTLPPDFS ENSP00000468304/1-628 CGSDIHPVGW CAASGKPLVP PRTIQHKYTN WKAFLVKRLT GAKTLPPDFS ENSTTRP00000007034/1-631 CGSDIHPVGW CAASGKPLVP PRTIQHKYTN WKAFLVKRLT GAKTLPPDFS 301 350 bmy_20771T0/1-463 QKVSESMQYP FKPCMRVEVV DKRHLCRTRV AVVESVIGGR LRLVYEESED BACU006447/1-423 QKVSESMQYP FKPCMRVEVV DKRHLCRTRV AVVESVIGGR LRLVYEESED ENSBTAP00000034827/1-651 QKVSESMQYP FKPCMRVEVV DKRHLCRTRV AVVESVIGGR LRLVYEESED ENSP00000468304/1-628 QKVSESMQYP FKPCMRVEVV DKRHLCRTRV AVVESVIGGR LRLVYEESED ENSTTRP00000007034/1-631 QKVSESMQYP FKPCMRVEVV DKRHLCRTRV AVVESVIGGR LRLVYEESED 351 400 bmy_20771T0/1-463 RTDDFWCHMH SPLIHHIGWS RSIGHRFKRS DITKKQDGHF DTPPHLFAKV BACU006447/1-423 RTDDFWCHMH SPLIHHIGWS RSIGHRFKRS DITKKQDGHF DTPPHLFAKV ENSBTAP00000034827/1-651 RTDDFWCHMH SPLIHHIGWS RSIGHRFKRS DITKKQDGHF DTPPHLFAKV ENSP00000468304/1-628 RTDDFWCHMH SPLIHHIGWS RSIGHRFKRS DITKKQDGHF DTPPHLFAKV ENSTTRP00000007034/1-631 RTDDFWCHMH SPLIHHIGWS RSIGHRFKRS DITKKQDGHF DTPPHLFAKV 401 450 bmy_20771T0/1-463 KEVDQSGEWF KEGMKLEAID PLNLSTICVA TIR------- ---------- BACU006447/1-423 KEVDQSGEWF KEGMKLEAID PLNLSTICVA TIR------- ---------- ENSBTAP00000034827/1-651 KEVDQSGEWF KEGMKLEAID PLNLSTICVA TIRKVLADGF LMIGIDGSEA ENSP00000468304/1-628 KEVDQSGEWF KEGMKLEAID PLNLSTICVA TIRKVLADGF LMIGIDGSEA ENSTTRP00000007034/1-631 KEVDQSGEWF KEGMKLEAID PLNLSTICVA TIRKVLADGF LMIGIDGSEA 451 500 bmy_20771T0/1-463 ---------- ---------- ---------- ---------- ---------- BACU006447/1-423 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000034827/1-651 ADGSDWFCYH ATSPSIFPVG FCEINMIELT PPRGYTKLPF KWFDYLRETG ENSP00000468304/1-628 ADGSDWFCYH ATSPSIFPVG FCEINMIELT PPRGYTKLPF KWFDYLRETG ENSTTRP00000007034/1-631 ADGSDWFCYH ATSPSIFPVG FCEINMIELT PPRGYTKLPF KWFDYLRETG 501 550 bmy_20771T0/1-463 ---------- KDVPNHGFRV GMKLEAVDLM EPRLICVATV TRIIHRLLRI BACU006447/1-423 ---------- KDVPNHGFRV GMKLEAVDLM EPRLICVATV TRIIHRLLRI ENSBTAP00000034827/1-651 SIAAPVKLFN KDVPNHGFRV GMKLEAVDLM EPRLICVATV TRIIHRLLRI ENSP00000468304/1-628 SIAAPVKLFN KDVPNHGFRV GMKLEAVDLM EPRLICVATV TRIIHRLLRI ENSTTRP00000007034/1-631 SIAAPVKLFN KDVPNHGFRV GMKLEAVDLM EPRLICVATV TRIIHRLLRI 551 600 bmy_20771T0/1-463 HFDGWEEEYD QWVDCESPDL YPVGWCQLTG YQLQPPASQC KLVYRKASRE BACU006447/1-423 HFDGWEEEYD QWVDCESPDL YPVGWCQLTG YQLQPPASQ- ---------- ENSBTAP00000034827/1-651 HFDGWEEEYD QWVDCESPDL YPVGWCQLTG YQLQPPASQ- ------SSRE ENSP00000468304/1-628 HFDGWEEEYD QWVDCESPDL YPVGWCQLTG YQLQPPASQ- ------SSRE ENSTTRP00000007034/1-631 HFDGWEEEYD QWVDCESPDL YPVGWCQLTG YQLQPPASQ- ------SSRE 601 650 bmy_20771T0/1-463 SQSGSSKQKK KAKSQQYKGH KKMTTLQLKE ELIDGEDYNF LQGASDQESN BACU006447/1-423 ---------- ---------- --LTTLQLKE ELIDGEDYNF LQGASDQESN ENSBTAP00000034827/1-651 SQSGSSKQKK KTKSQQYKGH KKMTTLQLKE ELIDGEDYSF LQGASDQESN ENSP00000468304/1-628 NQSASSKQKK KAKSQQYKGH KKMTTLQLKE ELLDGEDYNF LQGASDQESN ENSTTRP00000007034/1-631 SQSGSSKQKK KAKSQQYKGH KKMTTLQLKE ELIDGEDYNF LQGASDQESN 651 700 bmy_20771T0/1-463 GSANFYIKQE P BACU006447/1-423 GSANFYIKQE P ENSBTAP00000034827/1-651 GSANFYIKQE P ENSP00000468304/1-628 GSANFYIKQE P ENSTTRP00000007034/1-631 GSANFYIKQE P