KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:44:55 2014 Check: 00 .. Name: BACU020369/1-458 Len: 512 Check: 4783 Weight: 1.00 Name: bmy_08755T0/1-288 Len: 512 Check: 6747 Weight: 1.00 Name: ENSP00000340874/1-483 Len: 512 Check: 8771 Weight: 1.00 Name: ENSTTRP00000003719/1-472 Len: 512 Check: 3544 Weight: 1.00 Name: ENSBTAP00000034894/1-367 Len: 512 Check: 244 Weight: 1.00 // 1 50 BACU020369/1-458 ---------- -------QVT FTKRKFGLMK KAYELSVLCD CEIALIIFNS bmy_08755T0/1-288 ---------- -------MSK HPNKR----- ---------- ---------- ENSP00000340874/1-483 MGRKKIQITR IMDERNRQVT FTKRKFGLMK KAYELSVLCD CEIALIIFNS ENSTTRP00000003719/1-472 MGRKKIQITR IMDERNRQVT FTKRKFGLMK KAYELSVLCD CEIALIIFNS ENSBTAP00000034894/1-367 MGRKKIQITR IMDERNRQVT FTKRKFGLMK KAYELSVLCD CEIALIIFNS 51 100 BACU020369/1-458 TNKLFQYAST DMDKVLLKYT EYNEPHESRT NSDIVEALNK KENKGCESPD bmy_08755T0/1-288 ---------- -------KFQ NFG-LKESYI LNELLEK--- ---------- ENSP00000340874/1-483 TNKLFQYAST DMDKVLLKYT EYNEPHESRT NSDIVETLRK KGLNGCDSPD ENSTTRP00000003719/1-472 TNKLFQYAST DMDKVLLKYT EYNEPHESRT NSDIVETLRK KGLNGCDSPD ENSBTAP00000034894/1-367 TNKLFQYAST DMDKVLLKYT EYNEPHESRT NSDIVETLRK KGLNGCDSPD 101 150 BACU020369/1-458 PDSS------ ---------- ----YALTPR TEEKYKKINE EFDNMIKSHK bmy_08755T0/1-288 ---------- ---------- ---------- ---------- ---------- ENSP00000340874/1-483 PDADDSALNK KENKGCESPD PDSSYALTPR TEEKYKKINE EFDNMIKSHK ENSTTRP00000003719/1-472 PDADDS---- ---------- ----VGHSPE SEDKYRKINE DIDLMISRQR ENSBTAP00000034894/1-367 PDADDS---- ---------- ----VGHSPE SEDKYRKINE DIDLMISRQR 151 200 BACU020369/1-458 IPVSTKDQTI HNMMYCIEYV SISPLNLQ-- ---NLQGKNV LLICQTHRLL bmy_08755T0/1-288 ---------- ---------- ---------- ---------- ---------- ENSP00000340874/1-483 IP-------- ---------- AVPPPNFEMP VSIPVSSHNS LVYSNPVSSL ENSTTRP00000003719/1-472 LC-------- ---------- AVPPPNFEMP VSIPVSSHNS LVYSNPVSSL ENSBTAP00000034894/1-367 LC-------- ---------- AVPPPNFEMP VSIPVSSHNS LVYSNPVSSL 201 250 BACU020369/1-458 GEDRILRL-- --LKVKCVAL WAFSLSPSDL PLSSVGGLMG GDLTSGAGTS bmy_08755T0/1-288 ---------- ---------- ---------- ---------- ---------- ENSP00000340874/1-483 GNPNLLPLAH PSLQRNSMSP GVTHRPPSA- --GNTGGLMG GDLTSGAGTS ENSTTRP00000003719/1-472 GNPNLLPLAH PSLQRNSMSP GVTHRPPSA- --GNTGGLMG GDLTSGAGTS ENSBTAP00000034894/1-367 GNPNLLPLAH PSLQRNSMSP GVTHRPPSA- --GNTGGLMG GDLTSGAGTS 251 300 BACU020369/1-458 AGNGYGNPRN SPGLLVSPGN LNKNMQAKSP PPMNLGMNNR KPDLRVLIPP bmy_08755T0/1-288 -GNGYGNPRN SPGLLVSPGN LNKNMQAKSP PPMNLGMNNR KPDLRVLIPP ENSP00000340874/1-483 AGNGYGNPRN SPGLLVSPGN LNKNMQAKSP PPMNLGMNNR KPDLRVLIPP ENSTTRP00000003719/1-472 AGNGYGNPRN SPGLLVSPGN LNKNMQAKSP PPMNLGMNNR KPDLRVLIPP ENSBTAP00000034894/1-367 AGNGYGNPRN SPGLLVSPGN LNKNMQAKSP PPMNLGMNNR KPDLRVLIPP 301 350 BACU020369/1-458 GSKNTMPSV- -------NQR INNSQSAQSL ATPVVSVATP TLPGQGMGGY bmy_08755T0/1-288 GSKNTMPSVS EDVDLLLNQR INNSQSAQSL ATPVVSVATP TLPGQGMGGY ENSP00000340874/1-483 GSKNTMPSV- -------NQR INNSQSAQSL ATPVVSVATP TLPGQGMGGY ENSTTRP00000003719/1-472 GSKNTMPSVV MNY-ILKNQR INNSQSAQSL ATPVVSVATP TLPGQGMGGY ENSBTAP00000034894/1-367 GSKNTMPSVS EDVDLLLNQR INNSQSAQSL ATPVVSVATP TLPGQGMGGY 351 400 BACU020369/1-458 PSAISTTYGN EYSLSSADLS SLSGFNTASA LHLGSVTGWQ QQHLHNMPPS bmy_08755T0/1-288 PSAISTTYGN EYSLSSADLS SLSGFNTASA LHLGSVTGWQ QQHLHNMPPS ENSP00000340874/1-483 PSAISTTYGT EYSLSSADLS SLSGFNTASA LHLGSVTGWQ QQHLHNMPPS ENSTTRP00000003719/1-472 PSAISTTYGN EYSLSSADLS SLSGFNTASA LHLGSVTGWQ QQHLHNMPPS ENSBTAP00000034894/1-367 PSAISTTYGT EYSLSSADLS SLSGFNTASA LHLGSVTGWQ QQHLHSMPPS 401 450 BACU020369/1-458 ALSQLGACTS THLSQSSNLS LPSTQSLNIK SEPVSPPRDR TTTPSRYPQH bmy_08755T0/1-288 ALSQLGACTS THLSQSSNLS LPSTQSLNIK SEPVSPPRDR TTTPSRYPQH ENSP00000340874/1-483 ALSQLGACTS THLSQSSNLS LPSTQSLNIK SEPVSPPRDR TTTPSRYPQH ENSTTRP00000003719/1-472 ALSQLGACTS THLSQSSNLS LPSTQSLNIK SEPVSPPRDR TTTPSRYPQH ENSBTAP00000034894/1-367 ALSQLG---- ---------- ---------- ---------- ---------- 451 500 BACU020369/1-458 TRHEAGRSPV DSLSSCSSSY DGSDREDHRN EFHSPIGLTR PSPDERESPS bmy_08755T0/1-288 TRHEAGRSPV DSLSSCSSSY DGSDREDHRN EFHSPIGLTR PSPDERESPS ENSP00000340874/1-483 TRHEAGRSPV DSLSSCSSSY DGSDREDHRN EFHSPIGLTR PSPDERESPS ENSTTRP00000003719/1-472 TRHEAGRSPV DSLSSCSSSY DGSDREDHRN EFHSPIGLTR PSPDERESPS ENSBTAP00000034894/1-367 ---------- ---------- ---------- ---------- ---------- 501 550 BACU020369/1-458 VKRMRLSEGW AT bmy_08755T0/1-288 VKRMRLSEGW AT ENSP00000340874/1-483 VKRMRLSEGW AT ENSTTRP00000003719/1-472 VKRMRLSEGW AT ENSBTAP00000034894/1-367 ---------- --