KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:44:55 2014 Check: 00 .. Name: bmy_16755T0/1-235 Len: 352 Check: 5361 Weight: 1.00 Name: BACU017275/1-311 Len: 352 Check: 6096 Weight: 1.00 Name: ENSP00000328563/1-314 Len: 352 Check: 171 Weight: 1.00 Name: ENSBTAP00000034903/1-311 Len: 352 Check: 6653 Weight: 1.00 // 1 50 bmy_16755T0/1-235 ---------- ---------- ---------- ---------- ---------- BACU017275/1-311 MELGNCTRVK EFIFLGLTQN QGLSLVLFLF LLLVYVTTLL GNLLIMVTVT ENSP00000328563/1-314 MDQRNYTRVK EFTFLGITQS RELSQVLFTF LFLVYMTTLM GNFLIMVTVT ENSBTAP00000034903/1-311 MDQGNYTRVK EFIFLGITQS RELSWVLFVF LFLVYMTTLL GNLLIMVTVT 51 100 bmy_16755T0/1-235 ---------- ---------- ---------- ---------- ---------- BACU017275/1-311 CESRLHTPMY LLLRNLSIAD ICFSSITAPK VLVDLLSQRK TISFNGCFTQ ENSP00000328563/1-314 CESHLHTPMY FLLRNLSILD ICFSSITAPK VLIDLLSETK TISFSGCVTQ ENSBTAP00000034903/1-311 WDSRLHTPMY FLLRNLSVLD ICFSSITAPK VLADLLSERK TISFRGCVSQ 101 150 bmy_16755T0/1-235 ---------- -------MAF DHYVAISRPL HYLTIMSKER CTSLVVASWV BACU017275/1-311 MFFFHLIGGV DVFSLSVMAL DRYVAISKPL RYVPIMSRGR CIGLIVASWV ENSP00000328563/1-314 MFFFHLLGGA DVFSLSVMAF DRYIAISKPL HYMTIMSRGR CTGLIVASWV ENSBTAP00000034903/1-311 MFFFHLLGGA DVFSLSVMAF DRYVAISRPL HYLTVMSRGR CTALIVASWA 151 200 bmy_16755T0/1-235 GGFVHSIMQI SLLLPLPFCG PNVLDTFYCN VSQVLKLACT DTFTLELLMI BACU017275/1-311 GGFVHSIVQI SLLLPVPFCG PNVLDTFYCD VPQVLKLACT DILMLELLMI ENSP00000328563/1-314 GGFVHSIAQI SLLLPLPFCG PNVLDTFYCD VPQVLKLACT DTFTLELLMI ENSBTAP00000034903/1-311 GGFVHSIVQI SLLLPLPFCG PNVLDTFYCD VPQVLTLACT DTSSLELLMI 201 250 bmy_16755T0/1-235 SNNGLLSWFT FFLLLISYTV ILVMLRSQAG EGRRKAVSPF PSHIMVVTLH BACU017275/1-311 SNNGLLTTLW FAFLLVSYMV ILLLLRSQAG EGRRKAIATC TSHITVVTLH ENSP00000328563/1-314 SNNGLVSWFV FFFLLISYTV ILMMLRSHTG EGRRKAISTC TSHITVVTLH ENSBTAP00000034903/1-311 SNNGLVSWFI FFFLLVSYTV ILTMLRSHSG EGRRKAISTC TAHITVVTLH 251 300 bmy_16755T0/1-235 FVPCIYVYAR PFTALLTDTT ISVTFTVISP LFNPMIYLLR NQEMKKTGKG BACU017275/1-311 FVPCIYVYAR PFTTLPTDKA ISFIFTVISP LLNPLIYTLR NQEMKSAMR- ENSP00000328563/1-314 FVPCIYVYAR PFTALPTDTA ISVTFTVISP LLNPIIYTLR NQEMKLAMR- ENSBTAP00000034903/1-311 FVPCIYVYAR PFTALPTDKA VSVTFTVISP LLNPLIYTLR NQEMKAAMQ- 301 350 bmy_16755T0/1-235 ELHLWPPEQR KSMLSTGERE SPNHSKAVVS SWEEGGWETG EKHQVIEEEE BACU017275/1-311 -------RLK GRL------- ---------- ---------M PSHRV----- ENSP00000328563/1-314 -------KLK RRL------- ---------- ---------G QSERILIQ-- ENSBTAP00000034903/1-311 -------RLK KQL------- ---------- ---------G HSERV----- 351 400 bmy_16755T0/1-235 ET BACU017275/1-311 -- ENSP00000328563/1-314 -- ENSBTAP00000034903/1-311 --