KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:44:58 2014 Check: 00 .. Name: ENSTTRP00000001897/1-315 Len: 381 Check: 7812 Weight: 1.00 Name: ENSP00000261647/1-380 Len: 381 Check: 1742 Weight: 1.00 Name: ENSBTAP00000034918/1-365 Len: 381 Check: 2465 Weight: 1.00 Name: bmy_09644T0/1-248 Len: 381 Check: 8534 Weight: 1.00 Name: BACU006571/1-255 Len: 381 Check: 1367 Weight: 1.00 // 1 50 ENSTTRP00000001897/1-315 ---------- ---------- ---------- ---------- ---------- ENSP00000261647/1-380 MFRLLSWSLG RGFLRAAGRR CRGCSARLLP GLAGGPGPEV QVPPSRVAPH ENSBTAP00000034918/1-365 MYRLLAVGLA RGLLRVAGRR GRCHPVCLLP G-----PPGA RAPPCRGAPR bmy_09644T0/1-248 ---------- ---------- ---------- ---------- ---------- BACU006571/1-255 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000001897/1-315 ---------- --LARSSRPA AEEERERQGA GW----DGAG DTEAEIIQLM ENSP00000261647/1-380 GRGPGLLPLL AALAWFSRPA AAEEEEQQGA DGAAAEDGAD EAEAEIIQLL ENSBTAP00000034918/1-365 GRGSGLVPLL AALAWSSRPA AAEQERRG-A GG----AAAG DAEAEIIQLL bmy_09644T0/1-248 ---------- ---------- ---------- ---------- ---------- BACU006571/1-255 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000001897/1-315 KRAKLCIMKD EPAEAELILH DALRLAYKSD NKKAITYTYD LMANLAFIRG ENSP00000261647/1-380 KRAKLSIMKD EPEEAELILH DALRLAYQTD NKKAITYTYD LMANLAFIRG ENSBTAP00000034918/1-365 KRAKFCIMKD EPEEAELILH DALHLAHKSH NTKAIAYTYD LMANLAFIRG bmy_09644T0/1-248 -------MKD EPAEAELILR DALLLAYKSD NKKAITYTYD W--------- BACU006571/1-255 -------MKD EPAEAELILR DALLLAYKSD NKKAISYTYD W--------- 151 200 ENSTTRP00000001897/1-315 QLENXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXQDLALA ENSP00000261647/1-380 QLENAEQLFK ATMSYLLGGG MKQEDNAIIE ISLKLASIYA AQNRQEFAVA ENSBTAP00000034918/1-365 QLENAEKLFK ATMSYLLGGG MQQEDNAIIE ISLKLATIYA AQSRQELALA bmy_09644T0/1-248 ----AEKLFK QTMSYLLRRA VEQEDNAVIE ISLKLPTIYA AQNRQELTLA BACU006571/1-255 ----AEKLFK PTMSYLLRRA MEQEGNAIIV ISLKPATIYA AQNRQELTLA 201 250 ENSTTRP00000001897/1-315 GYEFCISTLE EKIERQKELS EDTLSXXXXX XXXXXLGMCL DTYARYLLFS ENSP00000261647/1-380 GYEFCISTLE EKIEREKELA EDIMSVEEKA NTHLLLGMCL DACARYLLFS ENSBTAP00000034918/1-365 GYEFCISTLE EKIERERELS EDVLSADDKA NTQLLLGMCL DTYARYLLFS bmy_09644T0/1-248 GYEFCISTLE EKIEREKELS EDTLSVEEKA NTHLLLGMCL DTYARYLLFS BACU006571/1-255 GYEFCISTLE EKIEREKELS EDTLSVEEKA NTHLLLGMCL DTYARYLLFS 251 300 ENSTTRP00000001897/1-315 KQPSQAQRMY EKALQIAEEI LGERHPQTIV LLSDLATTLD AQGRSDEACV ENSP00000261647/1-380 KQPSQAQRMY EKALQISEEI QGERHPQTIV LMSDLATTLD AQGRFDEAYI ENSBTAP00000034918/1-365 QQPSQAQRMY EKALRISEEI LGERHPQTIV LLNDLATTLD TQGRTDEACV bmy_09644T0/1-248 KQPSQAQRMN EKALQISEEI LRERHPQTMV LLSDLATTLD AQGRSDEARV BACU006571/1-255 KQPSRAQRMN EKALQISEEI LRERHPQTMV LLSDLATTLD AQGRSDEARV 301 350 ENSTTRP00000001897/1-315 HAQRASDLAR QVEHPELHVL LSNLAAVLMH RERYAQAEEI YQEALKRAKL ENSP00000261647/1-380 YMQRASDLAR QINHPELHMV LSNLAAVLMH RERYTQAKEI YQEALKQAKL ENSBTAP00000034918/1-365 HAQRASDLAR QVEHPELHVL LSNLAAVLTH RELYAQAEET YREALRQAEL bmy_09644T0/1-248 RAQRASDLAR QVEHPELHVL LSNLAAALTH RERYAQAEEI YQEALKRAKL BACU006571/1-255 RTQRASDLAR QVEHPELHVL LSDLAAALTH REQYAQAEEI YQEALKGAKL 351 400 ENSTTRP00000001897/1-315 KRDEVSVQRI REELAGLSRK RRPLSSLAEL W ENSP00000261647/1-380 KKDEISVQHI REELAELSKK SRPLTNSVKL - ENSBTAP00000034918/1-365 KRDEASVQHI REELAELARK SRPLS----- - bmy_09644T0/1-248 KRDEVSLQHI REELAELS-- ---------- - BACU006571/1-255 KRDEVSLQHI REELAELSRK SRPLS----- -