KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 17:44:58 2014  Check: 00 ..

 Name: ENSTTRP00000016290/1-209  Len:    265  Check:  1543  Weight:  1.00
 Name: bmy_10726T0/1-199         Len:    265  Check:  4139  Weight:  1.00
 Name: ENSP00000305654/1-205     Len:    265  Check:  6674  Weight:  1.00
 Name: ENSBTAP00000034933/1-208  Len:    265  Check:  5769  Weight:  1.00

//


                          1                                                   50
ENSTTRP00000016290/1-209  MLQQXXXXXX XXXXXXXXXX XXXXXXXXXX XXHPVASFFH LFFRVSAIIV 
bmy_10726T0/1-199         ---------- ---------- ---------- ---------- ---------- 
ENSP00000305654/1-205     MLQQDSNDDT EDVSLFDAEE ETTNRPRKAK IRHPVASFFH LFFRVSAIIV 
ENSBTAP00000034933/1-208  MLQQDSNDDT EDVSLFDAEE ETTNRPKKSR IRHPVASFFH LFFRVSAIIV 


                          51                                                 100
ENSTTRP00000016290/1-209  YLLCELFSSS FIACMVTIIL LLSCDFWAVK NVTGRLMVGL RWWNHIDEDG 
bmy_10726T0/1-199         ---------- ----MVTIIL LLSCDFWAVK NVTGRLMVGL RWWNHIDEDG 
ENSP00000305654/1-205     YLLCGLLSSS FITCMVTIIL LLSCDFWAVK NVTGRLMVGL RWWNHIDEDG 
ENSBTAP00000034933/1-208  YLLCELFSSS FIACMVTIIL LLSCDFWAVK NVTGRLMVGL RWWNHIDEDG 


                          101                                                150
ENSTTRP00000016290/1-209  KSHWVFESRK ASPQDSKTVS EAESRIFWLG LIACPVLWVI FAFSALFSFR 
bmy_10726T0/1-199         KSHWVFESRK ASSQDSKTVS EAESRIFWLG LVACPVLWVI FAFSALFSFR 
ENSP00000305654/1-205     KSHWVFESRK ESSQENKTVS EAESRIFWLG LIACPVLWVI FAFSALFSFR 
ENSBTAP00000034933/1-208  KSHWVFESRK ASPQEGKTVS EAESRIFWLG LVACPVLWVV FAFSALFSFR 


                          151                                                200
ENSTTRP00000016290/1-209  VKWLSSPQIL NAGRRKPPPH PKPPPSRASG RGH--RVATC LLARGGVGQT 
bmy_10726T0/1-199         VKWLAV-VIM GVVLQGANLY GY-IRCKVGS RKNLTSMATS YLGKQFLRQV 
ENSP00000305654/1-205     VKWLAV-VIM GVVLQGANLY GY-IRCKVRS RKHLTSMATS YFGKQFLRQN 
ENSBTAP00000034933/1-208  VKWLAV-VIM GVVLQGANLY GY-IRCKVGS RKNLTSMATT YLGRQFLRQT 


                          201                                                250
ENSTTRP00000016290/1-209  APGFLQAP-- ---------- -------GTH ---------- ---------- 
bmy_10726T0/1-199         SVFWMSGPLE TIRPPEESEG ACVFFPLGTT EGGLDSEPLE LSTYCKEECW 
ENSP00000305654/1-205     T--------- ---------- -------GDD QTS------- ---------- 
ENSBTAP00000034933/1-208  T--------- ---------- -------GDT QTSSGE---- ---------- 


                          251                                                300
ENSTTRP00000016290/1-209  ---------- ----- 
bmy_10726T0/1-199         VCFSILKFTL KKKEK 
ENSP00000305654/1-205     ---------- ----- 
ENSBTAP00000034933/1-208  ---------- -----