KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:44:59 2014 Check: 00 .. Name: ENSTTRP00000003101/1-620 Len: 620 Check: 2859 Weight: 1.00 Name: ENSP00000398655/1-620 Len: 620 Check: 8123 Weight: 1.00 Name: bmy_14767T0/1-411 Len: 620 Check: 2784 Weight: 1.00 Name: ENSBTAP00000034966/1-620 Len: 620 Check: 82 Weight: 1.00 // 1 50 ENSTTRP00000003101/1-620 MNNFILLEEQ LIKKSQQKRR TSPSNFKVRF FVLTKTSLAY FEDRHGKKRT ENSP00000398655/1-620 MNNFILLEEQ LIKKSQQKRR TSPSNFKVRF FVLTKASLAY FEDRHGKKRT bmy_14767T0/1-411 MNNFILLEEQ LIKKSQQKRR TSPSNFKVRF FVLTKTSLAY FEDRHGKKRT ENSBTAP00000034966/1-620 MNNFILLEEQ LIKKSQQKRR TSPSNFKVRF FVLTKTSLAY FEDRHGKKRT 51 100 ENSTTRP00000003101/1-620 LKGSIELSRI KCVEIVKSDI IIPCHYKYPF QVVHDNYLLY VFAPDRESRQ ENSP00000398655/1-620 LKGSIELSRI KCVEIVKSDI SIPCHYKYPF QVVHDNYLLY VFAPDRESRQ bmy_14767T0/1-411 LKGSIELSRI KCVEIVKSDI IIPCHYKYPF QVVHDNYLLY VFAPDRESRQ ENSBTAP00000034966/1-620 LKGSIELSRI KCVEIVKSDI IIPCHYKYPF QVVHDNYLLY VFAPDRESRQ 101 150 ENSTTRP00000003101/1-620 RWVLALKEET RNNNSLVPKY HPNFWMDGRW RCCAQLEKLA VGCAQYDPTK ENSP00000398655/1-620 RWVLALKEET RNNNSLVPKY HPNFWMDGKW RCCSQLEKLA TGCAQYDPTK bmy_14767T0/1-411 RWVLALKEET RNNNSLVPKY HPNFWMDGRW RCCAQLEKLA VGCAQYDPTK ENSBTAP00000034966/1-620 RWVLALKEET RNNNSLVPKY HPNFWLDGRW RCCAQMEKLA VGCAQYDPTK 151 200 ENSTTRP00000003101/1-620 NASKKPLPPT PEDNRQLLRE PEETLVIALY DYQTNDPQEL TLQRNEEYYL ENSP00000398655/1-620 NASKKPLPPT PEDNRRPLWE PEETVVIALY DYQTNDPQEL ALRRNEEYCL bmy_14767T0/1-411 NASKKPLPPT PEDNRQLLRE PEETLVIALY DYQTNDPQEL TLQRNEEYYL ENSBTAP00000034966/1-620 NASKKPLPPT PEDNRRSLRE LEETVVIALY DYQTNDPQEL MLQRNEEYYL 201 250 ENSTTRP00000003101/1-620 LDSSEIHWWR VQDRNGHEGY VPSSYLVEKS PNNLETYEWY NKSISRDKAE ENSP00000398655/1-620 LDSSEIHWWR VQDRNGHEGY VPSSYLVEKS PNNLETYEWY NKSISRDKAE bmy_14767T0/1-411 LDSSEIHWWR VQDRNGHEGY VPSSYLVEKS PNNLETYEWY NKSISRDKAE ENSBTAP00000034966/1-620 LDSSEIHWWR VQDRNGHEGY VPSSYLVEKS PNNLETYEWY NKNISRDKAE 251 300 ENSTTRP00000003101/1-620 KLLLDTGKEG AFMVRDSRTP GTYTVSVFTK AIVSENNPXX XXXXXXXXXX ENSP00000398655/1-620 KLLLDTGKEG AFMVRDSRTA GTYTVSVFTK AVVSENNPCI KHYHIKETND bmy_14767T0/1-411 KLLLDTGKEG AFMVRDSRTP GTYTVSVFTK AIVSESNPCI KHYHIKETND ENSBTAP00000034966/1-620 KLLLDTGKEG AFMVRDSRTP GTYTVSVFTK AIVSENNPCI KHYHIKETND 301 350 ENSTTRP00000003101/1-620 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXL VTRLRYPVSS WRQKAPVTAG ENSP00000398655/1-620 NPKRYYVAEK YVFDSIPLLI NYHQHNGGGL VTRLRYPVCF GRQKAPVTAG bmy_14767T0/1-411 NPKRYYVAEK YVFDSIPLLV NYHQHNGGGL VTRLRYPVSS WRQKAPVTAG ENSBTAP00000034966/1-620 NPKRYYVAEK YVFDSIPLLI NYHQHNGGGL VTRLRYPVCS WRQKAPVTAG 351 400 ENSTTRP00000003101/1-620 LRYGKWVIDP SELTFVQEIG SGQFGLVHLG YWLNRDKVAI KTIQEGAMSE ENSP00000398655/1-620 LRYGKWVIDP SELTFVQEIG SGQFGLVHLG YWLNKDKVAI KTIREGAMSE bmy_14767T0/1-411 LRYGKWVIDP SELTFVQEIG SGQFGLVHLG YWLNRDKVAI KTIQEGAMSE ENSBTAP00000034966/1-620 LRYGKWVIDP SELTFVQEIG SGQFGLVHLG YWLNKDKVAI KTIQEGAMSE 401 450 ENSTTRP00000003101/1-620 EDFVEEAEVM MKLSHPKLVQ LYGVCLEQAP ICLVFEFMEH GCLSDYLRSQ ENSP00000398655/1-620 EDFIEEAEVM MKLSHPKLVQ LYGVCLEQAP ICLVFEFMEH GCLSDYLRTQ bmy_14767T0/1-411 EDFVEEAEVM M--------- ---------- ---------- ---------- ENSBTAP00000034966/1-620 EDFIEEAEVM MKLSHPKLVQ LYGVCLEQAP ICLVFEFMEH GCLSDYLRSQ 451 500 ENSTTRP00000003101/1-620 RGLFAAETLL GMCLDVCEGM AYLEEACVIH RDLAARNCLV GENQVIKVSD ENSP00000398655/1-620 RGLFAAETLL GMCLDVCEGM AYLEEACVIH RDLAARNCLV GENQVIKVSD bmy_14767T0/1-411 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000034966/1-620 RGLFAAETLL GMCLDVCEGM AYLEEACVIH RDLAARNCLV GENQVIKVSD 501 550 ENSTTRP00000003101/1-620 FGMTRFVLDD QYTSSSGTKF PVKWASPEVF SFSRYSSKSD VWSFGVLMWE ENSP00000398655/1-620 FGMTRFVLDD QYTSSTGTKF PVKWASPEVF SFSRYSSKSD VWSFGVLMWE bmy_14767T0/1-411 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000034966/1-620 FGMTRFVLDD QYTSSTGTKF PVKWASPEVF SFSRYSSKSD VWSFGVLMWE 551 600 ENSTTRP00000003101/1-620 VFSEGKIPYE NRSNSEVVED ITTGFRLYKP RLASSHIYQI MNHCWKEKPE ENSP00000398655/1-620 VFSEGKIPYE NRSNSEVVED ISTGFRLYKP RLASTHVYQI MNHCWKERPE bmy_14767T0/1-411 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000034966/1-620 VFSEGKIPYE NRSNSEVVED ITTGFRLYKP RLASQHIYQI MNHCWKEKPE 601 650 ENSTTRP00000003101/1-620 DRPPFSRLLS QLAEIAESGL ENSP00000398655/1-620 DRPAFSRLLR QLAEIAESGL bmy_14767T0/1-411 ---------- ---------- ENSBTAP00000034966/1-620 DRPPFSRLLS QLAEIAELGL