KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:45:01 2014 Check: 00 .. Name: BACU000762/1-530 Len: 653 Check: 7393 Weight: 1.00 Name: ENSP00000341597/1-505 Len: 653 Check: 1754 Weight: 1.00 Name: ENSBTAP00000035006/1-500 Len: 653 Check: 1787 Weight: 1.00 Name: bmy_06203T0/1-451 Len: 653 Check: 444 Weight: 1.00 Name: ENSTTRP00000004787/1-505 Len: 653 Check: 5130 Weight: 1.00 // 1 50 BACU000762/1-530 MLRIVEPYIA WGYPNLKSVN ELIYKRVYGK INKKRIALTD NVLIARSLGE ENSP00000341597/1-505 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000035006/1-500 ---------- ---------- ---------- ---------- ---------- bmy_06203T0/1-451 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004787/1-505 ---------- ---------- ---------- ---------- ---------- 51 100 BACU000762/1-530 YGIICMEGLI HEIYTVGKRF KEANNFLWPF KLSSPRGGMK KKTTHFVEGN ENSP00000341597/1-505 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000035006/1-500 ---------- ---------- ---------- ---------- ---------- bmy_06203T0/1-451 ---------- ---------- --RVGKAFSV LKEDFRGSRE RLLCGCGGGN ENSTTRP00000004787/1-505 ---------- ---------- ---------- ---------- ---------- 101 150 BACU000762/1-530 DLIMSDKDDI ETEVITEATS ILEDENCEPT KNFESVDQSA KSER------ ENSP00000341597/1-505 ---MSDKDDI ETPLLTEAAP ILEDGNCEPA KNSESVDQGA KPESKSEPVV ENSBTAP00000035006/1-500 ---MSNKDDL ETAVITEATP IREDENCEPV KNFESVDQSA KSESKSEPVA bmy_06203T0/1-451 DLIMSDKDDI ETEVITEATS ILEDENCEPT KNFESVDQSA KSESKSEPVA ENSTTRP00000004787/1-505 ---MSDKDDI ETEVITEATS ILENENCEPT KNFESVDQSA KSESKSEPVA 151 200 BACU000762/1-530 ---------- ---------- ---------- ---------- ---------- ENSP00000341597/1-505 STRKRPETKP SSDLETSKVL PIQ------- DNVSKDVPQT RWGYWGSWGK ENSBTAP00000035006/1-500 STRKRPESKP SSDLET-EVL PVQASQAAGK ETVSKDVPQS GWGYWGSWGK bmy_06203T0/1-451 STRKRPESKP SSDLETSDXL PVQTSQAAGK ETVSKDVPQT GWGYWGSWGK ENSTTRP00000004787/1-505 STRKRPESKP SSDLETSDVL PVQ------- ETVSKDVPQT GWGYWGSWGK 201 250 BACU000762/1-530 ---------- ----QGISNV IEKAETSLGI PSPSEISSEV QYATGETNAK ENSP00000341597/1-505 SILSSASATV ATVGQGISNV IEKAETSLGI PGPSEISTEV KYVAGETNAK ENSBTAP00000035006/1-500 SLLSSASATV ATVGQGISNV IEKAETSLGI PSPSEISTEV QYATGETSAK bmy_06203T0/1-451 SLLSSASATV ATVGQGISNV IEKAETSLGI PSPGEISSEV QXATGETNAK ENSTTRP00000004787/1-505 SLLSSASATV ATVGQGISNV IEKAETSLGI PSPSEISSEV QYATGETNAK 251 300 BACU000762/1-530 ENENSSPMSG PFGVFSTIST AVQST----- ---------- ---------- ENSP00000341597/1-505 ENENSSPVAG AFGVFSTIST AVQSTGKSVI SGGLDALEFI GKKTMDVIAE ENSBTAP00000035006/1-500 ENGNSSPMSG PFGVFSTIST AVQSTGKSVI SGGLDALEFI GKKTMDVIAE bmy_06203T0/1-451 ENENSSPMSG PFGVFSTIST AVQSTGKSVI SGGLDALEFI GKKTMDVIAE ENSTTRP00000004787/1-505 ENENSSPMSG PFGVFSTIST AVQSTGKSVI SGGLDALEFI GKKTMDVIAE 301 350 BACU000762/1-530 ---------- ---------- VLREAKEKEE LWTANEVTME TDKKTHYGLL ENSP00000341597/1-505 GDPGFKRTKG LMNRNATLSQ VLREAKEKEE IRTSNEVTVE TDKKTHYGLL ENSBTAP00000035006/1-500 GDPGFKRTKG LMNRTSTLSQ VLREAKEKEE LWTSNEVTME TDKKTHYGLL bmy_06203T0/1-451 GDPGFKRTKG LMNRTSTLSQ VLREAKEKEE LWTANEVTME TDKKTHYGLL ENSTTRP00000004787/1-505 GDPGFKRTKG LMNRTSTLSQ VLREAKEKEE LWTTNEVTME TDKKTHYGLL 351 400 BACU000762/1-530 FDEFQGLSHL EALEMLSRES EIKVKSILNS LSGEELETLK FELEQLKEAF ENSP00000341597/1-505 FDEFQGLSHL EALEMLSQES EIKVKSILNS LSGEELETLK VELEQLKETF ENSBTAP00000035006/1-500 FDEFQGLSHL EALEMLSRES EIKVKSILNS LSGEELETLK LELEQLKEAF bmy_06203T0/1-451 FDEFQGLSHL EALEMLSRES EIKVKSILNS LSGEELETLK FELEQLKEAF ENSTTRP00000004787/1-505 FDEFQGLSHL EALEMLSRES EIKVKSILNS LSGEELETLK CELEQLKEAF 401 450 BACU000762/1-530 SLAEFCEEEE EEKKGDEDFT REITELFSQL HVSSKPEKLT RARNTACEWI ENSP00000341597/1-505 SLAEFCEEEE EEKKGDEDFT KDITELFSQL HVSSKPEKLA RARNTAHEWI ENSBTAP00000035006/1-500 SLAELCEEEE EEKKGDEDFT KEITELFSQL HVSSKPEKLA RARNTAYEWI bmy_06203T0/1-451 SLAEFCEEEE EEKKGDEDFT REITELFSQL HVSSKPEKLT R--------- ENSTTRP00000004787/1-505 SLAEFCEEEE EEKKGDEDFT KEITEVFSQL HVSSKPEKLT RARNTACEWI 451 500 BACU000762/1-530 RTSLAKPLEE KEEGKKQLEA EKIEQINNNS IEDIHAFAIR SLAELTACSI ENSP00000341597/1-505 RKSLTKPLAE NEEGEKQSEA ENTEQVNKNS IEDIHAFAIR SLAELTACSI ENSBTAP00000035006/1-500 RTSLAKPLKE KEEGEKQLEA ENTEQINNKS IEDIHAFAIR SLAELTACSI bmy_06203T0/1-451 ---------- ---------- ---------- --DIHAFAIR SLAELTACSI ENSTTRP00000004787/1-505 RTSLAKPLEE KEEGKKQLEA EEIEQINNNS IEDIHAFAIR SLAELTACSI 501 550 BACU000762/1-530 ELFHKTAALV LHGRKQEVTA IERSRALSQM TVVLCKELSS LSKEFTTCLT ENSP00000341597/1-505 ELFHKTAALV LHGRKQEVTA IERSQTLSQM TIVLCKELSS LSKEFTTCLT ENSBTAP00000035006/1-500 ELFHKTAALV LHGRKQEVTT IERSRALCQM TVLLCKELSC LSKEFTTCLT bmy_06203T0/1-451 ELFHKTAALV LHGRKQEVTA IERSRALSQM T--------- ---------- ENSTTRP00000004787/1-505 ELFHKTAALV LHGRKQEVTA IERSRALSQM TVVLCKELSS LSKEFTTCLT 551 600 BACU000762/1-530 TAGIAALS-- ----FTCFGL DLTKGQWFGR DDDKEEEQQE EKGKLKRTPC ENSP00000341597/1-505 TAGVKEMADV LNPLITAVFL EASNSASYIQ D--------- ---------- ENSBTAP00000035006/1-500 TAGVKEKADV LNPLITAVFL EASNSASYIQ D--------- ---------- bmy_06203T0/1-451 ---------- ---------- -ASNSASYIQ D--------- ---------- ENSTTRP00000004787/1-505 TAGVKEKADV LNPLITAVFL EASNSASYIQ D--------- ---------- 601 650 BACU000762/1-530 EEQQRKAEQV IAPVTLEFRT KTRKGGCLAS SISPEASEQH SLGLCGDNEH ENSP00000341597/1-505 ------AFQL LLPV------ -------LEI SLIENKIESH RHELQGQKPL ENSBTAP00000035006/1-500 ------AFQL LLPV------ -------LEI SFIENKTELP EA-------- bmy_06203T0/1-451 ------AFQL LLPV------ -------LEI SLIENKTELP EA-------- ENSTTRP00000004787/1-505 ------AFQL LLPV------ -------LEI SLIENKSELQ RHELQVQRPL 651 700 BACU000762/1-530 Q-- ENSP00000341597/1-505 LEH ENSBTAP00000035006/1-500 --- bmy_06203T0/1-451 --- ENSTTRP00000004787/1-505 SGH