KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:45:01 2014 Check: 00 .. Name: ENSP00000265728/1-674 Len: 694 Check: 288 Weight: 1.00 Name: ENSBTAP00000035016/1-673 Len: 694 Check: 516 Weight: 1.00 Name: ENSTTRP00000006034/1-675 Len: 694 Check: 6411 Weight: 1.00 Name: bmy_19658T0/1-689 Len: 694 Check: 6356 Weight: 1.00 Name: BACU019162/1-677 Len: 694 Check: 5619 Weight: 1.00 // 1 50 ENSP00000265728/1-674 MNSGAMRIHS KGHFQGGIQV KNEKNRPSLK SLKTDNRPEK SKCKPLWGKV ENSBTAP00000035016/1-673 MNSGVMRIHS KGHFQGGIQV KNEKNRPSLK SLKTDNKPEK SKYKPLWGKV ENSTTRP00000006034/1-675 MNSRAMRTLS RGHFQGGIQV KNEKNRPSLK SLKTDNKQEK SKYEPLWGKV bmy_19658T0/1-689 MNSRAMRIHS RGHFQGGIQV KNEKNRPSLK SLKTDNKPEK SKYKPLWGKV BACU019162/1-677 MNSRAMRIHS RGHFQGGIQV KNEK-RPSLK SLKTDNKPEK SKYKPLSGKV 51 100 ENSP00000265728/1-674 FYLDLPSVTI SEKLQKDIKD LGGRVEEFLS KDISYLISNK KEAKFAQTLG ENSBTAP00000035016/1-673 FYIDLPSVTT SEKLQKDIKD LGGRVEEFLS KDISYLISNK KEAKFAQTLG ENSTTRP00000006034/1-675 FYIDLPSVTI SEKLQKDIKD LGGRVEEFLS KDISYLISNK KEAKFAQTLG bmy_19658T0/1-689 FYIDLPSVTI SEKLQKDIKD LGGRVEEFLS KDISYLISNK XEAKFAQTLG BACU019162/1-677 FYIDLPSVTI SEKLQKDIKD LGGRVEEFLS KGISYLISNK KEAKFAQTLG 101 150 ENSP00000265728/1-674 RISPVPSPES AYTAETTSPH PSHDGSSFKS PDTVCLSRGK LLVEKAIKDH ENSBTAP00000035016/1-673 RISPIPSPES ANTAETTSPH PSHDGSSFKS PDTVCLSRGK LLVEKAIKDH ENSTTRP00000006034/1-675 RISPVPSPES AYTAETTSPH PSHDGSSFKS PDTVCLSRGK LLVEKAIKDH bmy_19658T0/1-689 RISPVPSPES AYTAETTSPH PSHDGSSFKA PDTVCLSRGK LLVEKAIKDH BACU019162/1-677 RISPVPSPES AYTAETTSPH SSHDGSSFKA PDTVCLSRGK LLVEKAIKDH 151 200 ENSP00000265728/1-674 DFIPSNSILS NALSWGVKIL HIDDIRYYIE QKKKELYLLK KSSTSVRDGG ENSBTAP00000035016/1-673 DFIPSNSILS NALSWGVKIL HIDDIRYYIE QRKKELYLLK KSSTSARDVG ENSTTRP00000006034/1-675 DFIPSNSILS NALSWGVKIL HIDDIRYYIE QKKKELYLLK KSSTSVRDGG bmy_19658T0/1-689 DFIPSNSILS NALSWGVKIL HIDDIRNYIE QKKKELYLLK KSSTSVRDGG BACU019162/1-677 DFIPSNSILS NALSWGVKIL HIDDIRYYIE QKKRELYLLK ASSTSVRDGG 201 250 ENSP00000265728/1-674 KRVGSGAQKT RTGRLKKPFV KVEDMSQLYR PFYLQLTNMP FINYSIQKPC ENSBTAP00000035016/1-673 KRVGVGTQKT KS-RLKKPFV KVEDMSQLYR PFYLQLTNMP FINYSIQKPS ENSTTRP00000006034/1-675 KRVSIGTQKA RTGRLKKPFV KVEDISQLYR PFYLQLTNMP FINYSVQKPS bmy_19658T0/1-689 KRVSIGTQKA RS-RLKKPFV KVEDISQLYR PFYLQLTSMP FINYSVQKPS BACU019162/1-677 KRVSIGTQKA RTGRLKKPFV KVEDISQLYR PFYLQLTSMP FINYSVQKPS 251 300 ENSP00000265728/1-674 SPFDVDKPSS MQKQTQVKLR IQTDGDKYGG TSIQLQLKEK KKKGYCECCL ENSBTAP00000035016/1-673 SPFDAEKPSS TQKQTQVKLR IQTDGDKCGG IPVQFQLKEK KKKGYCECCL ENSTTRP00000006034/1-675 SPFDVDKPST TQKETQVKLX XXXDGDKCGG IP-QLQLKEK KKKGY-ECCL bmy_19658T0/1-689 SPFDVDKPST TQKQTQVKLR IQTDGDKCGG IPVQLQLKEK KKKGYCECCL BACU019162/1-677 GPFDVDKPST TQKQTQVKLR IQTDGDKCGG IPVQLQLKE- KKKGYCECCL 301 350 ENSP00000265728/1-674 QKYEDLET-- --------HL LSEQHRNFAQ SNQYQVVDDI VSKLVFDFVE ENSBTAP00000035016/1-673 QKYEDLDI-- --------HL LSEQHRNFAQ SNHYQVVDDI ISKLVFDFVE ENSTTRP00000006034/1-675 QKYEDLDT-- --------HL LSEQHRNFAQ SNHYQLVDDI VSKLVFDFVE bmy_19658T0/1-689 QKYEDLDTLI LLIVVYNLHL LSEQHRNFAQ SDHYQVVDDI VSKLVFDFVD BACU019162/1-677 QKYEDLDT-- --------HL LSEQHRNFAQ SNHYQVVDDT VSKLVFDFVD 351 400 ENSP00000265728/1-674 YEKDTPKKKR IKYSVGSLSP VSASVLKKTE QKEKVELQHI SQKDCQEDDT ENSBTAP00000035016/1-673 YERDMPKKKR IKYSVGSLSP IIANVVKRSG TKE-LKLLHN SQKDSRE-NV ENSTTRP00000006034/1-675 YERDMPKNKR IKYSVGSLSP ITANVLKKFE RKEKMELQHT SQKNSRE-NT bmy_19658T0/1-689 YERDMPKNKR IKYSVGSLSP ITANVLRKSE PKEKMELQHT SQKNSRE-NV BACU019162/1-677 YERDMSKNKR IKYSVGSLSP LTANVLKKSE PKEKMELQHT SQKNSRE-NV 401 450 ENSP00000265728/1-674 TVKEQNFLYK E-TQETEKKL LFISEPIPHP SNELRGLNEK MSNKCSMLST ENSBTAP00000035016/1-673 HMMEQGFLYK EPVREPEQKF VSSSEHTLRR SSELRELDDK TSHKCSMLNP ENSTTRP00000006034/1-675 -VMEHGFLDK E-TQEPEQKF MSTSEHIPHP SSELRGHDDK TSNKCSMLNP bmy_19658T0/1-689 QVMEHGFLYK E-TQEPEQKF MSTSEHIPHP SSELRGHBDK TSNKCSMLNP BACU019162/1-677 QVMEHGLLYK E-TQEPEQKF MSTSEHIPHP SSELRGHDDK TSNKCSMLNP 451 500 ENSP00000265728/1-674 AEDDIRQ--- --NFTQLPLH KNKQECILDI SEHTL--SEN DLEELRVDHY ENSBTAP00000035016/1-673 AENNVKQ--- --NFTPLPPC KSKQEYILDV SEHKLILNES DL-EVKVDHC ENSTTRP00000006034/1-675 AENDIKENFI SLNFISLSPH KNKQECILNV PKHKLIINEN DL-EVRVDHC bmy_19658T0/1-689 AENDIKENFI SLNFISLSPH KNKQECILDV PEHKLIINEN DL-EVRVDHC BACU019162/1-677 AENDIKENFI SLNFISLSPH KNKQECILDV PEHKLIINEN DL-EVRVDHC 501 550 ENSP00000265728/1-674 KCNIQASVHV SDFSTDNSGS QPKQKSDTVL FPAKDLKEKD LHSIFTHDSG ENSBTAP00000035016/1-673 PCRPQTSIQV SNFNTDDSAS QWKQKLDTVL FPAKHLKEKN LYSVFHRDCD ENSTTRP00000006034/1-675 PHRQQASVQV SHFSMDNSAS QP-QKSDTVL FPAKDMKEKD -HSVFHCDSD bmy_19658T0/1-689 PRRQQASVQV SHFSTDNSAS QPKQKSDTVL FPAKDMKEKD LHSVFHHDSD BACU019162/1-677 PHRQQASVQV SHFSTDNSAS QPKQKSDTVL FPAKDMKEKD LHSVFHHDSD 551 600 ENSP00000265728/1-674 LITINSSQEH LTVQAKAPFH TPPEEPNECD FKNMDSLPSG KIHRKVKIIL ENSBTAP00000035016/1-673 LLAINSSQEH LTIWAEIPSE SPPEEPNTCD IKSTDSLPSG KICRKVKIPL ENSTTRP00000006034/1-675 LLAINSSQKH LTIQAKAPSQ SPTEEHNPCD IKNMDSLPSG KIHRKVKILL bmy_19658T0/1-689 LLAINSSQEH LTIQAKAPSQ SPPEEPNPCD IKNMDSLPSG KIHRKVKILL BACU019162/1-677 LLAINSSQEH LTIQVKAPSQ KP-EEPNPCD IKNMDSLPSG KIHRKVKILL 601 650 ENSP00000265728/1-674 GRNRKENLEP NAEFD-KRTE FIT-QEENRI CSSPVQSLLD LFQTSEEKSE ENSBTAP00000035016/1-673 GRNKKENLEP NVELDKKRTE FLT-TQENRV CSSPVKSLLD LFQTSEEKSE ENSTTRP00000006034/1-675 RRNKKENLEP NVELDKKRTE FLTTREENRI CSSSVQSLLD LFQTSEEKSE bmy_19658T0/1-689 GRNKKENLEP NVELYKKRTE FLTIQEENRI CNSSVQSLLD LFQTSEEKSE BACU019162/1-677 GRNKKENLEP NVELDKKRTE FLTTQEENRI CSSSVQSLLD LFQTSEEKSE 651 700 ENSP00000265728/1-674 FLGFTSYTEK SGICNVLDIW EEENSDNLLT AFFSSPSTST FTGF ENSBTAP00000035016/1-673 FLGFTSYTEK NNICDVLDIL EEENS-NLLT MFFSSPSTST FTGF ENSTTRP00000006034/1-675 FLGFTSYTEN SGICDVLDIW EEENS-NLLS VFFSSPSTST FSGF bmy_19658T0/1-689 FLGFTSYTEN SGICDVLDTW EEENS-NLLS VFYSSPSTST FSGF BACU019162/1-677 FLGFTSYTEN SGVCDVLDIW EEENS-NLLS VFYSSPSTST FSGF