KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:45:02 2014 Check: 00 .. Name: ENSP00000174618/1-582 Len: 589 Check: 6615 Weight: 1.00 Name: ENSBTAP00000035032/1-585 Len: 589 Check: 1537 Weight: 1.00 Name: ENSTTRP00000001108/1-569 Len: 589 Check: 4068 Weight: 1.00 Name: bmy_00188T0/1-575 Len: 589 Check: 9831 Weight: 1.00 // 1 50 ENSP00000174618/1-582 MSIETLLEAA RFLEWQAQQQ QRAREEQERL RLEQEREQEQ KKANSLARLA ENSBTAP00000035032/1-585 MSIETLLEAA RFLEWQAQQQ QRAREEQERL RLEREREQEQ KKANSLARLA ENSTTRP00000001108/1-569 MSIETLLEAA RFLEWQAQQQ QRAREEQERL RLEREREREQ QQASSLARLA bmy_00188T0/1-575 MSIETLLEAA RFLEWQAQQQ QRAREEQERL RLEREREQEQ QKASSLARLA 51 100 ENSP00000174618/1-582 HTLPVEEPRM EAPPLPLSPP APPPAPPPPL ATPAPLTVIP IPVVTNSPQP ENSBTAP00000035032/1-585 HTMPVEEPRT EAPPLPLSPP APPPAPPPPL ATPTPLTVIP IPVVTNSPQP ENSTTRP00000001108/1-569 HALPVEEPRI EAPPLPLSPP APPPAPPPPL ATPTPLTVIP IPVVTSSPQP bmy_00188T0/1-575 HALPVEEPRT EAPPLPLSPP APPPAPPPPL ATPTPLTVIP IPVVTSSPQP 101 150 ENSP00000174618/1-582 LPPPPPLPAA AQPLPLAPRQ PALVGAPGLS IKEPAPLPSR PQVPTPAPLL ENSBTAP00000035032/1-585 LPPPPPLPPT AQPLPLAPRQ PALVSTPGLS IKEPAPLPTR PQVPTPAPLL ENSTTRP00000001108/1-569 LPPPP----- --PLPLAPRQ PALVSAPGLS IKESAPLPTR PQGPTPSPLL bmy_00188T0/1-575 LPLPP----- --PLPLAPRQ PALVSAPGLS IKESAPLPTR PQGPTPAPLL 151 200 ENSP00000174618/1-582 PDSKATIPPN GSPKPLQPLP TPVLTIAPHP GVQPQLAPQQ PPPPTLGTLK ENSBTAP00000035032/1-585 PDSKATVPPT GSPKPLQPLP TPILTIAPHP GVQPQLAPPQ PPPSTLGTLK ENSTTRP00000001108/1-569 PDSKATVPPT GSPKPLQPLP TPILTIAPHP GVQPQLAPQQ PPPSTLGTLK bmy_00188T0/1-575 PDSKATVPPT GSPKPLQPLP TPILTIAPHP GVQPQLAPQQ PPPSTLGTLK 201 250 ENSP00000174618/1-582 LAPAEEVKSS EQKKRPGGIG TREVHNKLEK NRRAHLKECF ETLKRNIPNV ENSBTAP00000035032/1-585 LAPAEEVKSS EQKKRPGGIG TREVHNKLEK NRRAHLKECF ETLKRNIPNV ENSTTRP00000001108/1-569 LAPAEEVKSS EQKKRPGGIG TREVHNKLEK NRRAHLKECF ETLNRTIPNV bmy_00188T0/1-575 LAPAEEVKSG EQKKRPGGIG TREVHNKLEK NRRAHLKECF ETLKRNIPNV 251 300 ENSP00000174618/1-582 DDKKTSNLSV LRTALRYIQS LKRKEKEYEH EMERLAREKI ATQQRLAELK ENSBTAP00000035032/1-585 DDKKTSNLSV LRTALRYIQS LKRKEKEYEH EMERLAREKI ATQQRLAELK ENSTTRP00000001108/1-569 YDKKTSNLSG LPTALRXXXS LKRKEKEYEH EMERLAREKI ATQQRLAELK bmy_00188T0/1-575 DDKKTSNLSV LRTALRYIQS LKRKEKEYEH EMERLAREKI ATQQRLAELK 301 350 ENSP00000174618/1-582 HELSQWMDVL EIDRVLRQTG QPEDDQASTS TASEGEDNID EDMEEDRAGL ENSBTAP00000035032/1-585 HELSQWMDVL EIDRVLRQTG QPEDDQASTS TASEGEDNID EDMEEDQAGL ENSTTRP00000001108/1-569 HELSQWMDVL EIDRVLRQTG QPDDDQASTS TASEGEDNID EDMEEDQAGL bmy_00188T0/1-575 HELSQWMDVL EIDRVLRQTG QPDDDQASTS TASEGEDNID EDMEEDQAGL 351 400 ENSP00000174618/1-582 GPPKLSHRPQ PELLKSTLPP PSTTPAPLPP HPHPHPHSVA LPPAHLPVQQ ENSBTAP00000035032/1-585 GPHKLSHRPH PELPK---PP PSTAPAPLPP HPHPHAQPVA LSPAHLPGQQ ENSTTRP00000001108/1-569 GPPKLSHRPR PELPK---PP PSTAATPLPP HPQP----VA LSPAHLPGQQ bmy_00188T0/1-575 GPPKLSHRPR PELPK---PP PSTAPAPLPP HPQP----VA LSPAHLPGQQ 401 450 ENSP00000174618/1-582 -QQPQQKTPL PAPPPPPAAP AQTLVPAPAH LVATAGGGST VIAHTATTHA ENSBTAP00000035032/1-585 -PPPQQKTPL PVPPPPPAAP AQTLVPAPAH LVAAAGGGST VIAHTATTHA ENSTTRP00000001108/1-569 PPPPQQKTPL PAPPPPPAAP AQTLVPAPAH LVAAAGGGST VIAHTATTHA bmy_00188T0/1-575 PPPPQQKTPL PAPPPPPAAP AQTLVPAPAH LVAAAGGGST VIAHTATTHA 451 500 ENSP00000174618/1-582 SVIQTVNHVL QGPGGKHIAH IAPSAPSPAV QLAPATPPIG HITVHPATLN ENSBTAP00000035032/1-585 SVIQTVNHVL QGPGGKHIAH IAPSAPSPAV QLAPATPPIS HITVHPATLN ENSTTRP00000001108/1-569 SVIQTVNHVL QGPGGKHIAH IAPSAPSPAV QLAPATPPIG HITVHPAALN bmy_00188T0/1-575 SVIQTVNHVL QGPGGKHIAH IAPSAPSPAV QLAPATPPIG HITVHPAALN 501 550 ENSP00000174618/1-582 HVAHLGSQLP LYP------Q PVAVSHIAHT LSHQQVNGTA GLGPPATVMA ENSBTAP00000035032/1-585 HVAHLGSQLP LYPQPVAVSQ PVAVSHIAHT LSHQQVNGTA GLGPPATVMA ENSTTRP00000001108/1-569 HVAHLGSQLP LYP------Q PVAVSHIAHT LSHQQVNGTA GLGPPATVMA bmy_00188T0/1-575 HVAHLGSQLP LYPQPVAVSQ PVAVSHIAHT LSHQQVNGTA GLGPPATVMA 551 600 ENSP00000174618/1-582 KPAVGAQVVH HPQLVGQTVL NPVTMVTMPS FPVSTLKLA ENSBTAP00000035032/1-585 KPAVGAQVVH HPQLVGQTVL NPVTMVTMPS FPVSTLKLA ENSTTRP00000001108/1-569 KPAVGAQVVH HPQLVGQTVL NPVTMVTMPS FPVSTLKLA bmy_00188T0/1-575 KPAVGAQVVH HPQLVGQTVL NPVTMVTMPS FPVSTLKLA