KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:45:06 2014 Check: 00 .. Name: ENSP00000354497/1-1017 Len: 1027 Check: 9640 Weight: 1.00 Name: ENSBTAP00000035073/1-1023 Len: 1027 Check: 7025 Weight: 1.00 Name: ENSTTRP00000005433/1-1023 Len: 1027 Check: 299 Weight: 1.00 Name: bmy_11615T0/1-1024 Len: 1027 Check: 9303 Weight: 1.00 Name: BACU001809/1-963 Len: 1027 Check: 7263 Weight: 1.00 // 1 50 ENSP00000354497/1-1017 MMSEGKPPDK KRPRRSLSIS KNKKKASNSI ISCFNNAPPA KLACPVCSKM ENSBTAP00000035073/1-1023 MMSVGKSS-K KRPRTSLSSS KTKKNESNSI ISFFNNAPPA KLACPVCSKM ENSTTRP00000005433/1-1023 MMSVGKSS-K KRPR-SLSSS KTKKNESNSI IAFFNNVPPV KLACPICSKM bmy_11615T0/1-1024 MMSVGKSS-K KRPRRSLSSS KTKKNESNSI IAFFNNVPPV KLACPICSKM BACU001809/1-963 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000354497/1-1017 VPRYDLNRHL DEMCANN-DF VQVDPGQVGL INSNVSMVDL TSVTLEDVTP ENSBTAP00000035073/1-1023 VPRYDLNRHL DEMCADHDDV TPGGPRHVSL -SSNVPTIDL TNIALEDITP ENSTTRP00000005433/1-1023 VPRYDLNRHL DEMCANNGDI TPADPGHADL -SSNVSTVDL TNIALEDVTP bmy_11615T0/1-1024 VPRYDLNRHL DEMCANNGDI TPADPGHVGL -SSNVSTVDL TNIALEDVTP BACU001809/1-963 ---------- --MCANNGDV TPADPGHVGL -SSNVSTVDL TNIALEDVTP 101 150 ENSP00000354497/1-1017 KKSPPPKTNL TPGQSDSAKR EVKQKISPYF KSN-DVVCKN QDELRNRSVK ENSBTAP00000035073/1-1023 ERSSPSTINL TPGQSDSAKM GKKQQTSPYF KSKGDSVCRN QDELRHHNVK ENSTTRP00000005433/1-1023 EKSSPSKINL TPGQSDSAKM GIKQQTSPYF KSNGDAVCRN QDGLRHHNVK bmy_11615T0/1-1024 EKSSPSKINL TPGQSDSAKM GIKQQTSPYF KSNDDAVCRN QDGLRHHNVK BACU001809/1-963 EKSSPSKINL TPGRSDSAKM GIKQQTSPYF KSNDDAVCRN QVGLRHHNVK 151 200 ENSP00000354497/1-1017 VICLGSLASK LSRKYVKAKK SIDKDEEFAG SSPQSSKSTV VKSLIDNSSE ENSBTAP00000035073/1-1023 VISLGSLSSK LSRRYIKAKR SLNQNEEFTN QSLQRSSCTR VKSLVDQHLE ENSTTRP00000005433/1-1023 VIPLGSLSSK LSRRYIKAKR SIDKNEGFAN QSPQSFSSTG VRSLVDQCSE bmy_11615T0/1-1024 VIPLGSLSSK LSRRYLKAKR SIDKNEGFTN QSPQSSSSTG VKSLVDQCSE BACU001809/1-963 VIPLGSLSSK LSRRYLKAKR SIDKNEGFAN QSPQSSLSTG VKSLVDQCSE 201 250 ENSP00000354497/1-1017 IEDEDQILEN SSQKENVFKC DSLKEECIPE HMVRGSKIME AESQKATREC ENSBTAP00000035073/1-1023 VEGQDALLEN SSQKENVFTG DSQEELSAPA HTVEGTKVEE AEGQTAAQEC ENSTTRP00000005433/1-1023 MEGQDQLLEN SSQKENMFAC NSLEEPSTPE HIVGGSTIME AEGLTAAQEC bmy_11615T0/1-1024 MEGQDQLLEN SSQKENMFAC DSLEEPSTPE HIVGGSKIME AEGQTAAQEC BACU001809/1-963 MEGQDQLLEN SSQKENVFAC DSLEEPSTPE HTVGGSKIME AEGQTAAQEC 251 300 ENSP00000354497/1-1017 EKSALTPGFS DNAIMLFSPD FTLRNTLKST SEDSLVKQEC IK----EVVE ENSBTAP00000035073/1-1023 EQSALTPTCT GDAPLLFSSD LILGHR-KPA SEDHLAKQES IKGVDGEVTE ENSTTRP00000005433/1-1023 GRSTLTPTFS DNAPVLLSPD LTLGHKLKSA SEDHLAKQES IKGTDDKGVE bmy_11615T0/1-1024 GRSTLTPTFS DNAPVLLSPD LTLGHKLKSA SEDHLAKQES IKGTDDKGVE BACU001809/1-963 GRSTLTPTFS DNAPVLLSPD LTLGHKLKSA SEDHLAKQES IKGTDDKGVE 301 350 ENSP00000354497/1-1017 KREACHCEEV KMTVASEAKI QLSDSEAKSH SSADDASAWS NIQEAPLQDD ENSBTAP00000035073/1-1023 KCETGHSEEV KMTIVSEVTN QGSHREAKPP SSTLGASIQT NSQTLPSEPD ENSTTRP00000005433/1-1023 NCEAGGCEEV KMTFVSQAPT QSSHWEAKSH NSTHDASIWS DSQALPPEGD bmy_11615T0/1-1024 NCEAGGCEEV KMTFVSQAPT QSSHWEAKSH NSTHDASIWS DSQALPPEGD BACU001809/1-963 NCEAGGCEEV KMTFVSQAPT QSSHWEAKSH NSTHDASIWN DSQALPPEGD 351 400 ENSP00000354497/1-1017 SCLNNDIPHS IPLEQGSSCN GPGQTT---- GHPYYLRSFL VVLKTVLENE ENSBTAP00000035073/1-1023 SGLEDEITHQ MPLEKRSSCD VSWVTSPELP DHPYYLRSFL VVLKAVFENE ENSTTRP00000005433/1-1023 SGLKNESTDR TPLEQGSSCD VSRVTSPAPL DHPYYLRSFL VVLKAVFENE bmy_11615T0/1-1024 SGLKNEITDR IPLEQGSSCD VSCVTSPAPL DHPYYLRSFL VVLKAVFENE BACU001809/1-963 SGLKNEITDR IPLEQGSGCD VSCVTSPAPP DHPYYLRSFL VVLKAVFENE 401 450 ENSP00000354497/1-1017 DDMLLFDEQE KGIVTKFYQL SATGQKLYVR LFQRKLSWIK MTKLEYEEIA ENSBTAP00000035073/1-1023 EDRMLFDEHE KGIVTKFHQL SANGQKLYVR LFQRKFSWIK VNKLDYEEIS ENSTTRP00000005433/1-1023 EDRMLFDEXX XXXXXXXXXX XXSGQKLYVR LFQRKFGWIK MNKLEYEEIS bmy_11615T0/1-1024 EDRRLFDEHE KGIITKFHQL SASGQKLYVR LFQRKFGWIK MNKLEYEEIS BACU001809/1-963 EDRRLFDEHE KGIITKFHQL SASGQKLYVR LFQRKFGWIK MNKLEYEEIS 451 500 ENSP00000354497/1-1017 LDLTPVIEEL TNAGFLQTES ELQELSEVLE LLSAPELKSL AKTFHLVNPN ENSBTAP00000035073/1-1023 ADLTPVVGEL THAGFLQTES ELQELPEVLE LLSAPELKAL AKTFHLASAH ENSTTRP00000005433/1-1023 ADLTPVVREL THAGFLQTES ELQELSEVLE LLSAPELKAL AKTFHLVNPN bmy_11615T0/1-1024 ADLTPVVREL THAGFLQTES ELQELSEVLE LLSAPELKAL AKTFHLVNPN BACU001809/1-963 ADLTPVVGEL THAGFLQTES ELQELSEVLE LLSAPELKAL AKTFHLVNPN 501 550 ENSP00000354497/1-1017 GQKQQLVDAF LKLAKQRSVC TWGKNKPGIG AVILKRAKAL AGQSVRICKG ENSBTAP00000035073/1-1023 GQKQQLVDAF LRLAKQPSVC TWGRNQPGIG AVILKRAKDV AGRSLRVSRG ENSTTRP00000005433/1-1023 GQKQQLVNAF LKLAKQPSVC TWRKNQPGIG AVILKRAKDW AGQSLRVCRD bmy_11615T0/1-1024 GQKQQLVDAF LKLAKQPSVC TWRKNQPGIG AVILKRAKDW AGQSVRVCRD BACU001809/1-963 GQKQQLMDAF LKLAKQPSVC TWRKNQPGIG AVILKRAKDW AGQSVRVCRD 551 600 ENSP00000354497/1-1017 PRAVFSRILL LFSLTDSMED EDAACGGQGQ LSTVLLVNLG RMEFPSYTIN ENSBTAP00000035073/1-1023 PRAVFSRALL LFSLSDMVED EEAACGGQGQ LSTVLLVNLG RLEFPRYTVN ENSTTRP00000005433/1-1023 PRAVFSRVLL LFSLTHEVEE EEAACGGQGQ LSTVLLVNLG RMEFPRYTVS bmy_11615T0/1-1024 PRAVFSRVLL LFSLSHAVEE EEAACGGQGQ LSTVLLVNLG RVEFPRYTVS BACU001809/1-963 PRAVFSRVLL LFSLTHAVEE EEAACGGQGQ LSTVLLVNLG RVEFPRYTVS 601 650 ENSP00000354497/1-1017 RKTHIFQDRD DLIRYAAATH MLSDISSAMA NGNWEEAKEL AQCAKRDWNR ENSBTAP00000035073/1-1023 RKTLIFQDRD DLIRYAVAAH TLNDISTAMA SGAWEEAREL ARCAKQDWDG ENSTTRP00000005433/1-1023 RKTQIFQDRE DLIRYAAAAH MLNDISTAMA SGAWEEAREL ARCAKQAWDG bmy_11615T0/1-1024 RKTQIFQDRE DLIRYAAAAH MLNDISTAMA SGAWEEAREL ARCAKQDWDG BACU001809/1-963 RKTQIFQDRE DLIRYAAAAH MLNDISTAMA SGAWEEAREL ARCAKQDWDG 651 700 ENSP00000354497/1-1017 LKNHPSLRCH EDLPLFLRCF TVGWIYTRIL SRFVEILQRL HMYEEAVREL ENSBTAP00000035073/1-1023 LKDHPSLRYH ENLPLFLRCF TVGWVYTRIL SRNVEILQRL HLYEEAVKEL ENSTTRP00000005433/1-1023 LKGHPSLXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXEAVKEL bmy_11615T0/1-1024 LKDHPSLRYH EKLPLFLRCF TVGWVYTRIL SRTVEILQRL HMYKEAVKEL BACU001809/1-963 LKDHPSLRYH EKLPLFLRCF TVGWVYTRIL SRTAEILQRL HMYKEAVKEL 701 750 ENSP00000354497/1-1017 ESLLSQRIYC PDSRGRWWDR LALNLHQHLK RLEPTIKCIT EGLADPEVRT ENSBTAP00000035073/1-1023 ENLLSQDVYC SDSRGRWWDR LALNLHQHLK RLEPAVQCIA AGLADPHVRT ENSTTRP00000005433/1-1023 ENLLSQKVYC PDSRGRWWDR LALNLHQHLK RLEPAIKCIT AGLADPDVRT bmy_11615T0/1-1024 ENLLSQKVYC PDSRGRWWDR LALNLHQHLK RLEPAIKCIT AGLADPDVRT BACU001809/1-963 ENLLSQKVYC PDSRGRWWDR LALNLHQHLK RLEPAIKCIT AGLADPDVRT 751 800 ENSP00000354497/1-1017 GHRLSLYQRA VRLRESPSCK KFKHLFQQLP EMAVQDVKHV TITGRLCPQR ENSBTAP00000035073/1-1023 GHRLALYQRA ARLRASPSGQ KYMHLLRQLP EVTVEDVRHV TVTGRLCPQR ENSTTRP00000005433/1-1023 GHRLSLYQRA VRLRASPSCQ KYAHLFRQLP EVTVGDVKHV TVTGRLCPQS bmy_11615T0/1-1024 GHRLSLYQRA VRLRASPSCQ KYAHLFRQLP EVTVDDVKHV TVTGRLCPQP BACU001809/1-963 GHRLSLYQRA VRLRASPSCQ KYAHLFRQLP EITVDDVKHV TVTGRLCPQH 801 850 ENSP00000354497/1-1017 GMCKSVFVME AGEAADPTTV LCSVEELALA HYRRSGFDQG IHGEGSTFST ENSBTAP00000035073/1-1023 GSGKSVFVLE AGGAS-PATV LCSVEELALA HYRHCGFDQG IHGEGSTFST ENSTTRP00000005433/1-1023 GPGKSVFVLE AGGTA-PATV LCSVEELALA HYRRCGFDQG IHGEGSTFST bmy_11615T0/1-1024 GPGKSVFVLE AGGTA-PATV LCSVEELALA HYRRCGFDQG IHGEGSTFST BACU001809/1-963 GPGKSVFVLE AGGTA-PATV LCSVEELALA HYRRCGFDQG IHGEGSTFST 851 900 ENSP00000354497/1-1017 LYGLLLWDII FMDGIPDVFR NACQAFPLDL CTDSFFTSRR PALEARLQLI ENSBTAP00000035073/1-1023 LFGLLLWDII FMDGVPDAFR NAYQAAPLDL CTDSFFESRA SAMEARLQQI ENSTTRP00000005433/1-1023 LYGLLLWDVI FMDGIPDAFR NAYQAAPLDL CTDSFFASRA PAIETRLRQI bmy_11615T0/1-1024 LYGLLLWDVI FMDGIPDAFR NAYQAAPLDL CTDSFFASRA PAIEARLRQI BACU001809/1-963 LYGLLLWDVI FMDGIPDAFR NAYQAAPLDL CTDSFFASRA PAIEARLQQI 901 950 ENSP00000354497/1-1017 HDAPEESLRA WVAATWHEQE GRVASLVSWD RFTSLQQAQD LVSCLGGPVL ENSBTAP00000035073/1-1023 HSAPEESLRA WVAAVWQAQE GRVSSLVSWD RFSSLQQAQD LVSCLGGSIL ENSTTRP00000005433/1-1023 HGASAESLRA WVAAAWQAQE GRVASLVSWD RFASLQQAQD LVSCLGGPIL bmy_11615T0/1-1024 HGAPAESLRA WVAAAWQAQE GRVASLVSWD RFASLQQAQD LVSCLGGPIL BACU001809/1-963 HGAPAESLRA WVAAAWQAQE GRVASLVSWD RFASLQQAQD LVSCLGGPIL 951 1000 ENSP00000354497/1-1017 SGVCRHLAAD FRHCRGGLPD LVVWNSQSRH FKLVEVKGPN DRLSHKQMIW ENSBTAP00000035073/1-1023 SGVCRRLAMD FRHCRGGLPD LVVWSSQSHH VKLVEVKGPH DRLSQKQMIW ENSTTRP00000005433/1-1023 SGVCRRLAMD FRHCRGGLPD LVVWSSQSHH VKLVEVKGPS DRLSQKQMIW bmy_11615T0/1-1024 SGVCRRLAVD FRHCRGGLPD LVVWSSQSHH VKLVEVKGPS DRLSQKQMIW BACU001809/1-963 SGVCRRLAVD FRHCRGGLPD LVVWSSQSHH VKLVEVKGPS DRLSQKQMIW 1001 1050 ENSP00000354497/1-1017 LAELQKLGAE VEVCHVVAVG AKSQSLS ENSBTAP00000035073/1-1023 LDELRRLGAD VEVCHVAAVG ARSRGPD ENSTTRP00000005433/1-1023 LDELHRLGAD VEVCHVAAVG AKSRGPN bmy_11615T0/1-1024 LDELHRLGAD VEVCHVAAVG AKSRGPN BACU001809/1-963 LDELHRLGAD VEVCHVAAVG AKSRGPN