KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:45:07 2014 Check: 00 .. Name: ENSP00000385814/1-231 Len: 231 Check: 8931 Weight: 1.00 Name: ENSBTAP00000035090/1-219 Len: 231 Check: 7263 Weight: 1.00 Name: ENSTTRP00000013978/1-219 Len: 231 Check: 6505 Weight: 1.00 Name: bmy_08628T0/1-142 Len: 231 Check: 2953 Weight: 1.00 Name: BACU020237/1-219 Len: 231 Check: 7369 Weight: 1.00 // 1 50 ENSP00000385814/1-231 MAESLRSPRR SLYKLVGSPP WKEAFRQRCL ERMRNSRDRL LNRYRQAGSS ENSBTAP00000035090/1-219 MAERPGSRHH SLYKLTGSPP WKEAFRQGCL ERMRNSRDRL LSKYRQAGGS ENSTTRP00000013978/1-219 MAEGSGSRHR SLYKLVGSPP WKEAFRQGCL ERMRNSRDRL LNKYRQAGGN bmy_08628T0/1-142 MAEGSGSRRR SLYKLVGSPP WKEAFRQGCL ERMRKSRDRL LNRYRQAGGN BACU020237/1-219 MAEGSGSRRR SLYKLVGSPP WKEAFRQGCL ERMRKSRDRL LNKYRQAGGN 51 100 ENSP00000385814/1-231 GPGNSQNSFL VQEVMEEEWN ALQSVENCPE DLAQLEELID MAVLEEIQQE ENSBTAP00000035090/1-219 MSGGAQNTLL VQEVMEEEWN ALQSVESWPQ AWAQLEEPMD LAVLEEIQQE ENSTTRP00000013978/1-219 MSGGAQNTFL VQEVMEEEWN ALQSAESRPE ALAQLEEPLD LAVLEEIQQE bmy_08628T0/1-142 MSGGPQNTFL VQEVMEEEWN ALQSVESWPE ALAQLEEPLD LAVLEEIQQE BACU020237/1-219 MSGGPQNTFL VQEVMEEEWN ALQSVESWPE ALAQLEEPLD LAMLEEIQQE 101 150 ENSP00000385814/1-231 LINQEQSIIS EYEKSLQFDE KCLSIMLAEW EANPLICPVC TKYNLRITSG ENSBTAP00000035090/1-219 LIDQEQSIIS EYEKSLQFDE QCLSVMLAEW EANPLICPVC TKYNLRIAGG ENSTTRP00000013978/1-219 LIDQEQSIIS EYEKSLQFDE KCLSVMLAEW EANSLICPVC TKYNLRIASG bmy_08628T0/1-142 LIDQEQSIIS EYEKSLQFDE ECLSVMLAEW ZANSLICPVC TK-------- BACU020237/1-219 LIDQEQSIIS EYERSLQFDE ECLSVMLAEW EANSLICPVC TKYNLRIASG 151 200 ENSP00000385814/1-231 VVVCQCGLSI PSHSSELTEQ KLRACLEGSI NEHSAHCPHT PEFSVTGGTE ENSBTAP00000035090/1-219 LVVCQCGLYI QSHSPEVTEQ KLRACLEDSV NEHSAHCPHT PEFSVTEGTE ENSTTRP00000013978/1-219 VVMCQCGLYI PSHSPEVTEQ KFRACLEDSV NEHSACCPHT PAFSVTEGTE bmy_08628T0/1-142 ---------- ---------- ---------- ---------- ---------- BACU020237/1-219 VVMCQCGLYI PSHSPEMTEQ KFRACLEDSV NEHGAHCPHT PAFSVTEGTE 201 250 ENSP00000385814/1-231 EKSSLLMSCL VSVSWDPLCG KRDLWLVLFP P ENSBTAP00000035090/1-219 EKSCLLMSCL AC-------- --DTWAVIL- - ENSTTRP00000013978/1-219 EKPSLLMSCL AC-------- --DTWAVIL- - bmy_08628T0/1-142 ---------- ---------- ---------- - BACU020237/1-219 EKSSLLMSCL AC-------- --DTWAVIL- -