KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:45:08 2014 Check: 00 .. Name: ENSP00000360761/1-278 Len: 284 Check: 2442 Weight: 1.00 Name: ENSBTAP00000035108/1-277 Len: 284 Check: 3993 Weight: 1.00 Name: bmy_14813T0/1-175 Len: 284 Check: 1096 Weight: 1.00 Name: ENSTTRP00000007175/1-217 Len: 284 Check: 8088 Weight: 1.00 Name: BACU016129/1-251 Len: 284 Check: 6349 Weight: 1.00 // 1 50 ENSP00000360761/1-278 ------MELW PCLAAALLLL LLLVQLSRAA EFYAKVALYC ALCFTVSAVA ENSBTAP00000035108/1-277 ------MELW PWLIAA-LLP LLLAQLSRSA RFYAKIGLYC AFCFTASAMA bmy_14813T0/1-175 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007175/1-217 ---------- ---------- ---------- ---------- ---------- BACU016129/1-251 MGPGLDPIRW FWLNLP-LPP DTPAVLAYAT GLLSG----- ---------- 51 100 ENSP00000360761/1-278 SLVCLLRHGG RTVENMSIIG WFVRSFKYFY GLRFEVRDPR RLQEARPCVI ENSBTAP00000035108/1-277 AVVCLLRHGG RTVENMRIIS WFVRSFKYAY GLRFEVKGRE TLDEDRPCVI bmy_14813T0/1-175 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007175/1-217 ---------- -------IIS WFIRSFKYLY GLRFEVKGRQ KLEVDRPCVI BACU016129/1-251 ---------- -------IIS WFIRSFKYLY GLRFEVKGRQ KLEEDRPCVI 101 150 ENSP00000360761/1-278 VSNHQSILDM MGLMEVLPER CVQIAKRELL FLGPVGLIMY LGGVFFINRQ ENSBTAP00000035108/1-277 ISNHQSILDM MGLMEVLPDR CVQIAKRELL FLGPVGLIMY LGGVLFINRQ bmy_14813T0/1-175 ---------M MGLMEVLPDR CVQIAKRQLL FLGPVGLIMY LGGVLFIDRQ ENSTTRP00000007175/1-217 ISNHQSILDM MGLMEVLPDR CVQIAKRELL FLGPVGLIMY LGGVLFIDRQ BACU016129/1-251 ISNHQSILDM MGLMEVLPDR CVQIAKRELL FLGPVGLIMY LGGVLFINRQ 151 200 ENSP00000360761/1-278 RSSTAMTVMA DLGERMVREN LKVWIYPEGT RNDNGDLLPF KKGAFYLAVQ ENSBTAP00000035108/1-277 HSQTAMSVMT DVGERMVREK LKVWIYPEGT RNDNGDLLPF KKGAFYLAIQ bmy_14813T0/1-175 RSRMAMTVIS DVGKCMVREK LKVWIYPEGT RNDNGDLLPF KKGAFHLAIQ ENSTTRP00000007175/1-217 RSRTAMTVIS DVGKRMVREK LKVWIYPEGT RNDSGDLLPF KKGAFHLAIQ BACU016129/1-251 RSRMAMTVIS DVGERMVREK LKVWIYPEGT RNDNGDLLPF KKGAFYLAIQ 201 250 ENSP00000360761/1-278 AQVPIVPVVY SSFSSFYNTK KKFFTSGTVT VQVLEAIPTS GLTAADVPAL ENSBTAP00000035108/1-277 AQVPIIPVIY SSFSSFYSCK TKLFTSGTIQ VEVLDAIPTR GLTVADVPKL bmy_14813T0/1-175 AQVPIIPVVY SSFSSFYNYK TKLFTPGTVK VEVLDAIPTT GLTIADVPEL ENSTTRP00000007175/1-217 AQVPIIPVVY SSFSSFYNYK TKLFTSGTIK VEVLDAIPTA GLTIADVPEL BACU016129/1-251 AQVPIIPVVY SSFSSFYNYK TKLFTPGTVK VEVLDAIPTA GLTIADVPEL 251 300 ENSP00000360761/1-278 VDTCHRAMRT TFLHISKTPQ ENGATAGSGV QPAQ ENSBTAP00000035108/1-277 LDTCHQAMRT HFFHISKIPQ ENGAPLGPDT QEAQ bmy_14813T0/1-175 LDTCQQAMRT TFFHISQLPQ ENGASAGPDA QASQ ENSTTRP00000007175/1-217 LDTCQQAMRA TFLHVSQLPR ENGAPAGPDA QASQ BACU016129/1-251 LDTCQQAMRT TFFHVSQLPQ ENGAPAGPDA QASQ