KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:45:10 2014 Check: 00 .. Name: ENSTTRP00000005196/1-415 Len: 504 Check: 6688 Weight: 1.00 Name: bmy_12143T0/1-478 Len: 504 Check: 7682 Weight: 1.00 Name: ENSP00000353741/1-437 Len: 504 Check: 1490 Weight: 1.00 Name: BACU004109/1-437 Len: 504 Check: 1490 Weight: 1.00 Name: ENSBTAP00000035133/1-437 Len: 504 Check: 1490 Weight: 1.00 // 1 50 ENSTTRP00000005196/1-415 MADDPSAADR NVEIWKIKKL IKSLEAARG- ---------- ---------- bmy_12143T0/1-478 MADDPSAADR NVEIWKIKKL IKSLEAARGI LKELATSHCN GRYTYPSRKG ENSP00000353741/1-437 MADDPSAADR NVEIWKIKKL IKSLEAARG- ---------- ---------- BACU004109/1-437 MADDPSAADR NVEIWKIKKL IKSLEAARG- ---------- ---------- ENSBTAP00000035133/1-437 MADDPSAADR NVEIWKIKKL IKSLEAARG- ---------- ---------- 51 100 ENSTTRP00000005196/1-415 ---------- ---------- ---------- ---------- -----NGTSM bmy_12143T0/1-478 RLALDTFLGI FFFESKKLSK GSGALMQIGQ WTSLWCLGAM KPWISNGTSM ENSP00000353741/1-437 ---------- ---------- ---------- ---------- -----NGTSM BACU004109/1-437 ---------- ---------- ---------- ---------- -----NGTSM ENSBTAP00000035133/1-437 ---------- ---------- ---------- ---------- -----NGTSM 101 150 ENSTTRP00000005196/1-415 ISLIIPPKDQ ISRVAKMLAD EFGTASNIKS RVNRLSVLGA ITSVQQRLKL bmy_12143T0/1-478 ISLIIPPKDQ ISRVAKMLAD EFGTASNIKS RVNRLSVLGA ITSVQQRLKL ENSP00000353741/1-437 ISLIIPPKDQ ISRVAKMLAD EFGTASNIKS RVNRLSVLGA ITSVQQRLKL BACU004109/1-437 ISLIIPPKDQ ISRVAKMLAD EFGTASNIKS RVNRLSVLGA ITSVQQRLKL ENSBTAP00000035133/1-437 ISLIIPPKDQ ISRVAKMLAD EFGTASNIKS RVNRLSVLGA ITSVQQRLKL 151 200 ENSTTRP00000005196/1-415 YNKVPPNGL- VYCGTIVTE- -KEKKVNIDF E-FKPI-TSL YLCDKHT--- bmy_12143T0/1-478 YNKVPPNGLV VYCGTIVTEE GKEKK----- ---------- ---------- ENSP00000353741/1-437 YNKVPPNGLV VYCGTIVTEE GKEKKVNIDF EPFKPINTSL YLCDNKFHTE BACU004109/1-437 YNKVPPNGLV VYCGTIVTEE GKEKKVNIDF EPFKPINTSL YLCDNKFHTE ENSBTAP00000035133/1-437 YNKVPPNGLV VYCGTIVTEE GKEKKVNIDF EPFKPINTSL YLCDNKFHTE 201 250 ENSTTRP00000005196/1-415 ALTALLSDDS KFGFIVIDGS GALFGTLQGN TREVLHKFTV DLPKKHGRGG bmy_12143T0/1-478 ALTALLSDDS KFGFIVIDGS GALFGTLQGN TREVLHKFTV DLPKKHGRGG ENSP00000353741/1-437 ALTALLSDDS KFGFIVIDGS GALFGTLQGN TREVLHKFTV DLPKKHGRGG BACU004109/1-437 ALTALLSDDS KFGFIVIDGS GALFGTLQGN TREVLHKFTV DLPKKHGRGG ENSBTAP00000035133/1-437 ALTALLSDDS KFGFIVIDGS GALFGTLQGN TREVLHKFTV DLPKKHGRGG 251 300 ENSTTRP00000005196/1-415 QSALRFARLR MEKRHNYVRK VAETAVQLFI SGDKVNVAGL VLAGSADFKT bmy_12143T0/1-478 QSALRFARLR MEKRHNYVRK VAETAVQLFI SGDKVNVAGL VLAGSADFKT ENSP00000353741/1-437 QSALRFARLR MEKRHNYVRK VAETAVQLFI SGDKVNVAGL VLAGSADFKT BACU004109/1-437 QSALRFARLR MEKRHNYVRK VAETAVQLFI SGDKVNVAGL VLAGSADFKT ENSBTAP00000035133/1-437 QSALRFARLR MEKRHNYVRK VAETAVQLFI SGDKVNVAGL VLAGSADFKT 301 350 ENSTTRP00000005196/1-415 ELSQSDMFDQ SKLNS----- -DISYENNQA ------ESTE VLSNVKI--- bmy_12143T0/1-478 ELSQSDMFDQ -RLQSKVLKL VDISYGGENG FNQAIELSTE VLSNVKFIQE ENSP00000353741/1-437 ELSQSDMFDQ -RLQSKVLKL VDISYGGENG FNQAIELSTE VLSNVKFIQE BACU004109/1-437 ELSQSDMFDQ -RLQSKVLKL VDISYGGENG FNQAIELSTE VLSNVKFIQE ENSBTAP00000035133/1-437 ELSQSDMFDQ -RLQSKVLKL VDISYGGENG FNQAIELSTE VLSNVKFIQE 351 400 ENSTTRP00000005196/1-415 QEVIGRYFDE ISQDTGKYCF GVEDTLKALE MGAVEILIVY ENLDIMRYVL bmy_12143T0/1-478 KKLIGRYFDE ISQDTGKYCF GVEDTLKALE MGAVEILIVY ENLDIMRYVL ENSP00000353741/1-437 KKLIGRYFDE ISQDTGKYCF GVEDTLKALE MGAVEILIVY ENLDIMRYVL BACU004109/1-437 KKLIGRYFDE ISQDTGKYCF GVEDTLKALE MGAVEILIVY ENLDIMRYVL ENSBTAP00000035133/1-437 KKLIGRYFDE ISQDTGKYCF GVEDTLKALE MGAVEILIVY ENLDIMRYVL 401 450 ENSTTRP00000005196/1-415 HCQGTEEEKI LYLTPEQEKD KSHFTDKETG QEHELIESMP LLEWFANNYK bmy_12143T0/1-478 HCQGTEEEKI LYLTPEQEKD KSHFTDKETG QEHELIESMP LLEWFANNYK ENSP00000353741/1-437 HCQGTEEEKI LYLTPEQEKD KSHFTDKETG QEHELIESMP LLEWFANNYK BACU004109/1-437 HCQGTEEEKI LYLTPEQEKD KSHFTDKETG QEHELIESMP LLEWFANNYK ENSBTAP00000035133/1-437 HCQGTEEEKI LYLTPEQEKD KSHFTDKETG QEHELIESMP LLEWFANNYK 451 500 ENSTTRP00000005196/1-415 KFGATLEIVT DKSQEGSQFV KGFGGIGGIL RYRVDFQGME YQGGDDEFFD bmy_12143T0/1-478 KFGATLEIVT DKSQEGSQFV KGFGGIGGIL RYRVDFQGME YQGGDDEFFD ENSP00000353741/1-437 KFGATLEIVT DKSQEGSQFV KGFGGIGGIL RYRVDFQGME YQGGDDEFFD BACU004109/1-437 KFGATLEIVT DKSQEGSQFV KGFGGIGGIL RYRVDFQGME YQGGDDEFFD ENSBTAP00000035133/1-437 KFGATLEIVT DKSQEGSQFV KGFGGIGGIL RYRVDFQGME YQGGDDEFFD 501 550 ENSTTRP00000005196/1-415 LDDY bmy_12143T0/1-478 LDDY ENSP00000353741/1-437 LDDY BACU004109/1-437 LDDY ENSBTAP00000035133/1-437 LDDY