KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:45:11 2014 Check: 00 .. Name: ENSP00000395653/1-459 Len: 459 Check: 3111 Weight: 1.00 Name: ENSBTAP00000035161/1-459 Len: 459 Check: 8846 Weight: 1.00 Name: bmy_00106T0/1-423 Len: 459 Check: 3633 Weight: 1.00 Name: BACU019668/1-459 Len: 459 Check: 3209 Weight: 1.00 Name: ENSTTRP00000009654/1-459 Len: 459 Check: 5573 Weight: 1.00 // 1 50 ENSP00000395653/1-459 MEGSASPPEK PRARPAAAVL CRGPVEPLVF LANFALVLQG PLTTQYLWHR ENSBTAP00000035161/1-459 MEGRANSPGE PRAWPTRSVL CRGCVEPLVF LANFALVLQG PVTTQYLWHR bmy_00106T0/1-423 MEGRESSQGE PRAWPAGSVL CRGCVEPLIF LANFALVLQG PVTTQYLWHR BACU019668/1-459 MEGRANSRGE PRAWPAGSVL RRGCVEPLIF LANFALVLQG PVTTQYLWHR ENSTTRP00000009654/1-459 MEGRANSRCE PRAWPAGPVL CRGCVEPLIF LANFALVLQG PVTTQYLWHR 51 100 ENSP00000395653/1-459 FSADLGYNGT RQRGGCSNRS ADPTMQEVET LTSHWTLYMN VGGFLVGLFS ENSBTAP00000035161/1-459 FSADLGYNGT RHRDSCSNHS VDPIAQEVET LTSHWTLYMN VGGFLVGLFS bmy_00106T0/1-423 FSADLGYNGT RDRGSCSNHS VDPTAQEVET LTSHWTLYMN MGGFLVGLFS BACU019668/1-459 FSADLGYNGT RDRGSCSNHS VDPTAQEVET LTSHWTLYMN MGGFLVGLFS ENSTTRP00000009654/1-459 FSADLGYNGT RDRGSCTNHS VDPTAQKVET LTSHWTLYMN MGGFLVGLFS 101 150 ENSP00000395653/1-459 STLLGAWSDS VGRRPLLVLA SLGLLLQALV SVFVVQLQLH VGYFVLGRIL ENSBTAP00000035161/1-459 STLLGAWSDC VGRRPLLVLA SLGLLLQTVL SIFVVQLHLH IGYLVLGRIL bmy_00106T0/1-423 CTLLGAWSDC VGRRPLLVLA SLGLLLQTVL SILVVQLQLH VGYFVLGRIL BACU019668/1-459 CTLLGAWSDC VGRRPLLVLA SLGLLLQTVL SILVVQLQLH VGYFVLGRIL ENSTTRP00000009654/1-459 STLLGAWSDC VGRRPLLVLA SLGLLLQTVL SIFVVQLQLH VGYFVLGRIL 151 200 ENSP00000395653/1-459 CALLGDFGGL LAASFASVAD VSSSRSRTFR MALLEASIGV AGMLASLLGG ENSBTAP00000035161/1-459 CALLGDFSGL LAASFASVAD VSSSRTRTIR MALLEACIGV AGMLASFIGG bmy_00106T0/1-423 CALLGDFGGL LAAGFASVAD VSSSRTRTIR MALLEACIGV AGMLASLIGG BACU019668/1-459 CALLGDFGGL LAAGFASVAD VSSSRTRTIR MALLEACIGV AGMLASLIGG ENSTTRP00000009654/1-459 CALLGDFSGL LAAGFASVAD VSSSRTRTIR MALLEACIGV AGMLASLIGG 201 250 ENSP00000395653/1-459 HWLRAQGYAN PFWLALALLI AMTLYAAFCF GETLKEPKST RLFTFRHHRS ENSBTAP00000035161/1-459 FLLQEQVYVN PFWLALAVLT VMTLYAAFCF GETVKERTPT RLFTLRHHRS bmy_00106T0/1-423 NWLQKQGYAN PFWLALALLI AMTLYAAFCF GETVKEPTRA RLFTLRHHRS BACU019668/1-459 NWLHEQGYAN PFWLALALLI AMTLYAAFCF GETVKEPTRA RLFTLRHHRS ENSTTRP00000009654/1-459 NWLQEQGYAN PFWLALAVLI AMTLYAAFCF GETVKEATPA RLFTLRHHRS 251 300 ENSP00000395653/1-459 IVQLYVAPAP EKSRKHLALY SLAIFVVITV HFGAQDILTL YELSTPLCWD ENSBTAP00000035161/1-459 VIQLYVTQAP EKSRKHLALY SLAIFVMITV HLGAQDILTL YELSAPLCWD bmy_00106T0/1-423 IVQLYVTQAP EKSRKHLALY SLAIFVVITV HFGAQDILTL YELSTPLCWD BACU019668/1-459 IVQLYVTQAP EKSRKHLALY SLAIFVVITV HFGAQDILTL YELSTPLCWD ENSTTRP00000009654/1-459 IVQLYVTQAP EKSRKHLALY SLAIFVVITV HLGAQDILTL YELSTPLCWD 301 350 ENSP00000395653/1-459 SKLIGYGSAA QHLPYLTSLL ALKLLQYCLA DAWVAEIGLA FNILGMVVFA ENSBTAP00000035161/1-459 SRLISYGSAA QQLPYLTSLL GLRLLQYCLA DTWVAEIGLV FNILGMMVFA bmy_00106T0/1-423 SRLIXYGSAA QHLPYLTSLL GLRLLQYCLA DTWVAEIGLA FNIMGMVVFA BACU019668/1-459 SRLIGYGSAA QHLPYLTSLL GLRLLQYCLA DTWVAEIGLA FNIMGMVVFA ENSTTRP00000009654/1-459 SRLIGYGSAA QHLPYLTSLL GLRLLQYCLA DTWVAEIGLA FNIMGMVVFA 351 400 ENSP00000395653/1-459 FATITPLMFT GYGLLFLSLV ITPVIRAKLS KLVRETEQGA LFSAVACVNS ENSBTAP00000035161/1-459 FATITPLMFT GYGLLFLSLV VTPIIRAKLS RLVRQSEQGA LFSALACVNG bmy_00106T0/1-423 FATITPLMFT GYGLLFLSLV VTPIIRAKLS RLVRESEQGY WKGLIIALNS BACU019668/1-459 FATITPLMFT GYGLLFLSLV VTPIIRAKLS RLVRESEQGA LFSAVACVNG ENSTTRP00000009654/1-459 FATITPLMFT GYGLLFLSLV VTPVIRAKLS RLVRESEQGA LFSAVACVNG 401 450 ENSP00000395653/1-459 LAMLTASGIF NSLYPATLNF MKGFPFLLGA GLLLIPAVLI GMLEKADPHL ENSBTAP00000035161/1-459 LAMLMASGIF NSLYPATLNL MKGFPFLLAA GLLFIPAILM GILERDNHCP bmy_00106T0/1-423 SSFPRA---- ----PDVPGP EDG------- ---------- GQEEQREH-- BACU019668/1-459 LAMLTASGIF NSLYPATLNF MKGFPFLLGA GLLFIPAVLI GILERANHCP ENSTTRP00000009654/1-459 LAMLTASGIF NSLYPATLNF MKGFPFLLGA GLLFIPAVLI GILERANHCP 451 500 ENSP00000395653/1-459 EFQQFPQSP ENSBTAP00000035161/1-459 EFQEFSQSP bmy_00106T0/1-423 --------- BACU019668/1-459 EFQQFPQSP ENSTTRP00000009654/1-459 EFQQFSQSP