KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:45:11 2014 Check: 00 .. Name: ENSP00000364567/1-354 Len: 1488 Check: 6369 Weight: 1.00 Name: ENSBTAP00000035177/1-354 Len: 1488 Check: 5921 Weight: 1.00 Name: ENSTTRP00000004317/1-353 Len: 1488 Check: 9944 Weight: 1.00 Name: bmy_15905T0/1-312 Len: 1488 Check: 3747 Weight: 1.00 Name: BACU017392/1-1488 Len: 1488 Check: 615 Weight: 1.00 // 1 50 ENSP00000364567/1-354 MEKFKAAMLL GSVGDALGYR NVCKENSTVG MKIQEELQRS GGLDHLVLSP ENSBTAP00000035177/1-354 MEKFQAAMLL GAVGDALGFG HAARESSSLG ARVQEEMGKG GGLDHLVLSP ENSTTRP00000004317/1-353 MEKFQAAMLL GAVGDALGHG HAFGEDSASG PKVQKEPGKV GGLDHLVLSP bmy_15905T0/1-312 MEKFQAAMLL GAVGDALGHG HAFGEDSASG PKVQKELGEV GGLDHLVLSP BACU017392/1-1488 MEKFQAAMLL GAVGDALGHG HAFGEDSASG PKVQKELGEV GGLDHLVLSP 51 100 ENSP00000364567/1-354 GEWPVSDNTI MHIATAEALT TDYWCLDDLY REMVRCYVEI VEKLPERRPD ENSBTAP00000035177/1-354 ETWPVSDNTI MHMSTAGALI TDFWCLDDLY REMVRRYVDV LEKLPEQRAD ENSTTRP00000004317/1-353 ERWPVSDNTI MHMATAGALV TDFWCLDDLY REMVRRYVDV LEKLPGQRVD bmy_15905T0/1-312 EKWPVSDNTI MHMTTAGALV TDFWCLDDLY REMVRRYVDA LEKLPGQRVD BACU017392/1-1488 EKWPVSDNTI MHMTTAGALV TDFWCLDDLY REMVRRYVDV LEKLPGQRVD 101 150 ENSP00000364567/1-354 PATIEGCAQL KPNNYLLAWH TPFNEKGSGF GAATKAMCIG LRYWKPERLE ENSBTAP00000035177/1-354 PATLEGCSQL KPDNYLLAWH TPFNEKGSGF GAATKAMCVG MRYWQPERLE ENSTTRP00000004317/1-353 PATVEGCSQL KPDNYLLAWH TPFNEKGSGF GAATKAMCVG MRYWQPGRLE bmy_15905T0/1-312 PATVEGCSQL KPDNYLLAWH TPFNEK---- ---------- ---------- BACU017392/1-1488 PATVEGCSQL KPDNYLLAWH TPFNEKGSGF GAATKAMCVG MRYWQPERLE 151 200 ENSP00000364567/1-354 TLIEVSVECG RMTHNHPTGF LGSLCTALFV SFAAQGKPLV QWGRDMLRAV ENSBTAP00000035177/1-354 TLVEVSVECG RMTHNHPTGF LGSLCTALFA SYAVQGKRLE QWGRDMLRTV ENSTTRP00000004317/1-353 TLLEVSVECG RMTHNHPTXX XGSLCTALFA SYAIQGKRLE QWGRDMLRTV bmy_15905T0/1-312 ---------- --------GF LGSLCTALFA SYAVQGKRLE QWGRDMLRTV BACU017392/1-1488 TLLEVSLECG RMTHNHPTGF LGSLCTALFA SYAVQGKRLE QWGRDMLRTV 201 250 ENSP00000364567/1-354 PLAEEYCRKT IRHTAEYQEH WFYFEAKWQF YLEERKISKD SENKAIFPDN ENSBTAP00000035177/1-354 PLAEEYCKKT IRHLAEYQEH WFYFEAKWQF YLEERKIIED TENEASFPDR ENSTTRP00000004317/1-353 PLAEEYCKRT IRHLAEYQEH WFYFEAKWQF YLEERKISED TENEASFPDR bmy_15905T0/1-312 PLAEEYCKRT IRHLAEYQEH WFYFEAKWQF YLEERKISED TENEASFPDR BACU017392/1-1488 PLAEEYCKRT IRHLAEYQEH WFYFEAKWQF YLEERKISED TENEASFPDR 251 300 ENSP00000364567/1-354 YDAEEREKTY RKWSSEGRGG RRGHDAPMIA YDALLAAGNS WTELCHRAMF ENSBTAP00000035177/1-354 YDAEEREKTY RKWSSEGRGG RRGHDAPMIA YDALLGAKGS WTELCRRAMF ENSTTRP00000004317/1-353 YSAEERDKDY RKSSSERSRC RRGHDAPMI- YDAILGAKDS WTELCHRAMF bmy_15905T0/1-312 YNAEERDKTY RKWSSEGRGG RRGHDAPMIA YDALLGAKGS WTELCHRAMF BACU017392/1-1488 YNAEERDKTY RKWSSEGRGG RRGHDAPMIA YDALLGAKGS WTELCHRAMF 301 350 ENSP00000364567/1-354 HGGESAATGT IAGCLFGLLY GLDLVPKGLY QDLEDKEKLE DLGAALYRLS ENSBTAP00000035177/1-354 HGGESGATGA IAGCLFGLLH GLDAVPAGLY RELEHQDELR RLGEALHRLS ENSTTRP00000004317/1-353 HGGESGATGA IAGCLFGLLH GLDAVPAGLY RELELKEQLR RLGEELYRLS bmy_15905T0/1-312 HGGESGATGA IAGCLFGLLH GLDTVPAGLY RELEHRETLR HLGEALYRLS BACU017392/1-1488 HGGESGATGA IAGCLFGLLH GLDAVPAGLY RELEHGETLR HLGEALYRLS 351 400 ENSP00000364567/1-354 TEEK------ ---------- ---------- ---------- ---------- ENSBTAP00000035177/1-354 SQEK------ ---------- ---------- ---------- ---------- ENSTTRP00000004317/1-353 AEEK------ ---------- ---------- ---------- ---------- bmy_15905T0/1-312 TEEK------ ---------- ---------- ---------- ---------- BACU017392/1-1488 TEENPKSSRI CSNKTPIDVQ ALKKKVSRVT CDPAARAILS SLLVYITDRE 401 450 ENSP00000364567/1-354 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000035177/1-354 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004317/1-353 ---------- ---------- ---------- ---------- ---------- bmy_15905T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU017392/1-1488 DGPRELPPAR RAEGGVSKTS RAPEPQDAQR RPTRFQLLKA KFMGTGREPC 451 500 ENSP00000364567/1-354 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000035177/1-354 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004317/1-353 ---------- ---------- ---------- ---------- ---------- bmy_15905T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU017392/1-1488 LKRTREVGRL IFKDRQGPGR SLVTATVHKL LEKAREGAGR PAWGREPLGR 501 550 ENSP00000364567/1-354 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000035177/1-354 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004317/1-353 ---------- ---------- ---------- ---------- ---------- bmy_15905T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU017392/1-1488 EKPRGLPAGR SSVKSILKVF LAAEEKEAEE KPPAEPPRAA GGPLPKVGGR 551 600 ENSP00000364567/1-354 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000035177/1-354 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004317/1-353 ---------- ---------- ---------- ---------- ---------- bmy_15905T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU017392/1-1488 RSAALXXXXX XXXXXXXXXX XXXXXXXXXX XRSGCRCAEA GLLPLRADER 601 650 ENSP00000364567/1-354 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000035177/1-354 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004317/1-353 ---------- ---------- ---------- ---------- ---------- bmy_15905T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU017392/1-1488 KKRLPRSPLH RPERRVLRTA TLASTCIRAP PARFLAVSAE PLLPFSIATV 651 700 ENSP00000364567/1-354 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000035177/1-354 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004317/1-353 ---------- ---------- ---------- ---------- ---------- bmy_15905T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU017392/1-1488 VCGPHSWMSH GARVTRADLR RAPRGETGTA PRARETPGGI LAPGWGQPRQ 701 750 ENSP00000364567/1-354 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000035177/1-354 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004317/1-353 ---------- ---------- ---------- ---------- ---------- bmy_15905T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU017392/1-1488 PSAPRATTPR DGPQTVVPGA GPQCVPRAAP SPASPRGEVL PGREPVMSPP 751 800 ENSP00000364567/1-354 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000035177/1-354 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004317/1-353 ---------- ---------- ---------- ---------- ---------- bmy_15905T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU017392/1-1488 GPDSQGGTGA AQGARGARLG PRPGLVGGGP GAAPEVTLTV CSSEDETEGM 801 850 ENSP00000364567/1-354 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000035177/1-354 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004317/1-353 ---------- ---------- ---------- ---------- ---------- bmy_15905T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU017392/1-1488 TADSEPEPLF AVQENCPEER APGQIPPLAA HAAQAARRTQ PAVEPPRLAA 851 900 ENSP00000364567/1-354 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000035177/1-354 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004317/1-353 ---------- ---------- ---------- ---------- ---------- bmy_15905T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU017392/1-1488 RFPAAHTVPP PPATLQRASG PEDQGWRLLG GEGVTGNTGA PPPTTAQGGS 901 950 ENSP00000364567/1-354 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000035177/1-354 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004317/1-353 ---------- ---------- ---------- ---------- ---------- bmy_15905T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU017392/1-1488 RGAPSSAGLS PAGLSPPALP QQGPGAQPTL APPQRAACHG PDVPEAVPTT 951 1000 ENSP00000364567/1-354 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000035177/1-354 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004317/1-353 ---------- ---------- ---------- ---------- ---------- bmy_15905T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU017392/1-1488 KPQKSSPGGK ETRRSPGTSH RLPKHQDMWG EDASQLSSKT PLLRGREERP 1001 1050 ENSP00000364567/1-354 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000035177/1-354 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004317/1-353 ---------- ---------- ---------- ---------- ---------- bmy_15905T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU017392/1-1488 AGDTGTSSHR STASENRWEG LTGCAPGGRQ ALVPRVPRRS GVSVSMRPEA 1051 1100 ENSP00000364567/1-354 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000035177/1-354 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004317/1-353 ---------- ---------- ---------- ---------- ---------- bmy_15905T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU017392/1-1488 PAQDGRRPEN LPSVDKSPPR EQEGHRGPPS SPEPARPPLT AEGSASRDPG 1101 1150 ENSP00000364567/1-354 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000035177/1-354 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004317/1-353 ---------- ---------- ---------- ---------- ---------- bmy_15905T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU017392/1-1488 ENRVSSLNEQ TQPRSVKAPG RVTAAGASRS PPARAPGDAL SPGNRAAEEQ 1151 1200 ENSP00000364567/1-354 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000035177/1-354 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004317/1-353 ---------- ---------- ---------- ---------- ---------- bmy_15905T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU017392/1-1488 EERGAARPTG PGLAAEKPDR QPGGHSVCRA SGSLPAPPRE AAGAQTLPVE 1201 1250 ENSP00000364567/1-354 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000035177/1-354 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004317/1-353 ---------- ---------- ---------- ---------- ---------- bmy_15905T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU017392/1-1488 PHVAAPVKRY IRKGVPLEHR ARVWMGVSGA QAQMDRNPGY YRHLLQGERD 1251 1300 ENSP00000364567/1-354 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000035177/1-354 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004317/1-353 ---------- ---------- ---------- ---------- ---------- bmy_15905T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU017392/1-1488 DSLEEAIRTD MNRTFPDNVR FRKGSEPCLQ RTLYNVLLAY GHHNRGVGYC 1301 1350 ENSP00000364567/1-354 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000035177/1-354 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004317/1-353 ---------- ---------- ---------- ---------- ---------- bmy_15905T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU017392/1-1488 QGMNFIAGYL ILVTKSEEES FWLLDALVGR ILPGTLNPRD YYSPSMLGLK 1351 1400 ENSP00000364567/1-354 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000035177/1-354 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004317/1-353 ---------- ---------- ---------- ---------- ---------- bmy_15905T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU017392/1-1488 TDQEVLGELV RTKLPAVAAL MDSHGLLWTL VVSRWFICLF VDVLPMETVL 1401 1450 ENSP00000364567/1-354 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000035177/1-354 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004317/1-353 ---------- ---------- ---------- ---------- ---------- bmy_15905T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU017392/1-1488 RIWDCLFNEG SKIIFRVALT LIKQHQALIL EATSVPDICE KFKEITRGSF 1451 1500 ENSP00000364567/1-354 ---------- ---------- ---------- -------- ENSBTAP00000035177/1-354 ---------- ---------- ---------- -------- ENSTTRP00000004317/1-353 ---------- ---------- ---------- -------- bmy_15905T0/1-312 ---------- ---------- ---------- -------- BACU017392/1-1488 VTECHTFMQK IFSEPGSLSR AGIARLRERC RARLLAQG