KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:45:25 2014 Check: 00 .. Name: bmy_02871T0/1-170 Len: 287 Check: 9512 Weight: 1.00 Name: ENSP00000300618/1-275 Len: 287 Check: 5079 Weight: 1.00 Name: ENSBTAP00000035278/1-286 Len: 287 Check: 1279 Weight: 1.00 Name: ENSTTRP00000008454/1-270 Len: 287 Check: 6320 Weight: 1.00 // 1 50 bmy_02871T0/1-170 ---------- ---------- ---------- ---------- ---------- ENSP00000300618/1-275 MDTILVFSLI IASYDANKKD LRDSSCRLEQ LPGIFPKDVR SIRELQMQET ENSBTAP00000035278/1-286 MDTILVFSLI ITSYNVTKKE LRDSSCQVEP LPDLFPKDVR SIRAELIREA ENSTTRP00000008454/1-270 TDAVLVFSLI ITSYDANKKE LRDSSCQVEL LPGLF----- -LSKGLMREA 51 100 bmy_02871T0/1-170 ---------- ---------- ---------- ---MSDLPKC KFYEKELHSS ENSP00000300618/1-275 HTETKRTTFI QNRTIATLQC LGSDSKVKVN LVYLERRPKV KHILKNLRII ENSBTAP00000035278/1-286 QAEAKRPMFI QNQTVAILQC LGSGSKVKVN LVHSEKRQKV KHILKNLRVM ENSTTRP00000008454/1-270 RTEAKSPTFI LNQAVATLQC LGSRSKVKVN LVYLEKRRKV KHTQKNLRV- 101 150 bmy_02871T0/1-170 VSP------- -----SPVPR IL-------K TFLPGISQCL --SSDGGFIR ENSP00000300618/1-275 AAPRRNSSAS SSCHLIPTSK FQTGSLLKGK AFLPGISQCK ---VLGASSE ENSBTAP00000035278/1-286 TVPCRNSTAP PSCHLTPASK VQAGFLVTGK AFLPGVSQCK VYPVMGASSE ENSTTRP00000008454/1-270 AVPRRNSTAP PGCHLTLTSK VQIGSLVTGK AFLPGISHCK VYPVMGASSE 151 200 bmy_02871T0/1-170 DFSHHYHLRN SWEK-GEKTT RIDDFSSPLK QDTDEDLEKR QKWSIVVKFL ENSP00000300618/1-275 TFPTTAPSIT PGNKEGEKTT ST-------- -DTDENLEKR QKWSIVVKIL ENSBTAP00000035278/1-286 TYPSTTTSVT PGKK-GEKTT KVDGFSSPLN QDTDENLEKR KKWSIVVKVL ENSTTRP00000008454/1-270 TFPTTTTFVT PGKK-GEKTT RI-------- -DTDEDLEKR QKWSIVVKFL 201 250 bmy_02871T0/1-170 IAVTLLFSGI AITVFVIFEV PCPSQCLGAR ELCQCQRLWR RQRKEGQQPG ENSP00000300618/1-275 IAVTLLLSGV AIIVFVIFEV PCPYQCLGAR KLCQCQWLWR WQKKGGQPPG ENSBTAP00000035278/1-286 IAVTLFVSGI AITVFVIFEV PCPSRCQQVR ELCQCQRLRR RPRKEDQQPG ENSTTRP00000008454/1-270 IAVTLLFRGI AIIVFIIFEV PCPSQCLGAR ELCQCQRLWR RQGKEGQQPG 251 300 bmy_02871T0/1-170 ---------- --VGQDAPKS SSPKKAAEIT VVHETYF ENSP00000300618/1-275 TAESKPDSQP QKVGQDAANS SNPKKAAEIT VIHQTYF ENSBTAP00000035278/1-286 TAESQSDTQP KKVGQEAPNS SSPKKAVEIT VVHQTYF ENSTTRP00000008454/1-270 VAESQTDSQP KKLGQDAPKS SSPKKAAEIT VVHETYF