KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:45:32 2014 Check: 00 .. Name: BACU006581/1-172 Len: 315 Check: 9384 Weight: 1.00 Name: ENSBTAP00000035379/1-226 Len: 315 Check: 9008 Weight: 1.00 Name: ENSP00000321026/1-228 Len: 315 Check: 6111 Weight: 1.00 Name: bmy_05508T0/1-314 Len: 315 Check: 3592 Weight: 1.00 Name: ENSTTRP00000002768/1-226 Len: 315 Check: 9404 Weight: 1.00 // 1 50 BACU006581/1-172 MDDGPLPDLR DIELKLGRKV PESLVRSLRG EEPVPQERDR DPAGGSSGGG ENSBTAP00000035379/1-226 MEDGPLPDLR DIELKLGRKV PESLVRSLRG EEPVPPERDR DPGGGS---G ENSP00000321026/1-228 MEDSPLPDLR DIELKLGRKV PESLVRSLRG EEPVPRERDR DPCGGSGGGG bmy_05508T0/1-314 MDDGPLPDLR DIELKLGRKV PESLVRSLRG EEPVPQERDR DPAGGSSG-G ENSTTRP00000002768/1-226 MDDGPLPDLR DIELKLGRKV PDSLVRSLRG EEPVPQERDR DPAGGS---S 51 100 BACU006581/1-172 GGGGGCSSSS SSCSFPLSLS SSSSSSPTSG SPPPSHSSSA LERLETKLHL ENSBTAP00000035379/1-226 GSGSGCSSSS SCCSFPLSLS SSSSSSPTSG SPRPTHSSST LERLETKIHL ENSP00000321026/1-228 GGGGGCSSSS SYCSFPPSLS SSSSSSPTSG SPRGSH-SSA LERLETKLHL bmy_05508T0/1-314 GGGGVCSSSS SSCSFPLSLS SSSSSSPTSG SPPPSHSSSA LERLETKLHL ENSTTRP00000002768/1-226 GGGGVCSSSS SSCSFPLSLS SSSSPSPTSG SPQPSHSSSA LERLETKLHL 101 150 BACU006581/1-172 LSQEMTWQFS YKHGTDAVVQ FFVSPGIPMS RSWAMP---- ---------- ENSBTAP00000035379/1-226 LRQ------- ---------- ---------- ---------- ---------- ENSP00000321026/1-228 LRQ------- ---------- ---------- ---------- ---------- bmy_05508T0/1-314 LRQEMTWQFS YKHGTDAVVQ FFLSPGIPMS RSWAMPLKRE GEKKKKKRGR ENSTTRP00000002768/1-226 LRQ------- ---------- ---------- ---------- ---------- 151 200 BACU006581/1-172 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000035379/1-226 ---------- ---------- ---------- ---------E MVNLRATDGK ENSP00000321026/1-228 ---------- ---------- ---------- ---------E MVNLRATDVR bmy_05508T0/1-314 GGEEGRKEKR REEKRKEPFF CCEVIQQNFF LVAGPTLSSD MVNLRATDGR ENSTTRP00000002768/1-226 ---------- ---------- ---------- ---------D MVNLRATDGR 201 250 BACU006581/1-172 ---------- -LEDLSLWIQ EREVVGY--- ---------- ---------- ENSBTAP00000035379/1-226 LMRQLLLINE SIESIKWMIE EKATITSRGS SLSGSLCSLL ESQSTSLHGS ENSP00000321026/1-228 LMRQLLVINE SIESIKWMIE EKATITSRGS SLSGSLCSLL ESQSTSLRGS bmy_05508T0/1-314 LMRQLLLINE SIESIKWMIE EKATITSRGS SLSGSLCSLL ESQSTSLYGS ENSTTRP00000002768/1-226 LMRQLLLINE SIESIKWMIE EKATITSRGS SLSGSLCSLL ESQSTSLYGS 251 300 BACU006581/1-172 ---------- ---LQFGKTL EKDAQDKGGL VSV------- ---------- ENSBTAP00000035379/1-226 CNSLHDGSDG LDGISVGSYL DTLADDVPGH HTPSDLDQFS DSSVVGDSHA ENSP00000321026/1-228 YNSLHDGSDG LDGISVGSYL DTLADDVPGH QTPSDLDQFS DSSLIEDSQA bmy_05508T0/1-314 YNSLHDGSDG LDGISVGSYL DTLADDVPGH QTPSDLDQFS DNSVIGDSHA ENSTTRP00000002768/1-226 YNSLHDGSDG LDGISVGSYL DTLADDVPGH QTPSDLDQFS DNSVIGDSHA 301 350 BACU006581/1-172 ---------- ----- ENSBTAP00000035379/1-226 LYKRPKLDSE YYCFG ENSP00000321026/1-228 LHKRPKLDSE YYCFG bmy_05508T0/1-314 LHKRPKLDSE YYCFG ENSTTRP00000002768/1-226 LHKRPKLDSE YYCFG