KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:45:35 2014 Check: 00 .. Name: bmy_09017T0/1-332 Len: 519 Check: 6161 Weight: 1.00 Name: ENSP00000368831/1-519 Len: 519 Check: 5715 Weight: 1.00 Name: ENSBTAP00000035453/1-519 Len: 519 Check: 6148 Weight: 1.00 Name: ENSTTRP00000005318/1-518 Len: 519 Check: 3549 Weight: 1.00 Name: BACU013023/1-492 Len: 519 Check: 221 Weight: 1.00 // 1 50 bmy_09017T0/1-332 ---------- ---------- -----MIFNS ---------- ---------- ENSP00000368831/1-519 MAAEREPPPL GDGKPTDFED LEDGEDLFTS TVSTLESSPS SPEPASLPAE ENSBTAP00000035453/1-519 MAAEREPPPL GDGKPTDFEE LEDGEDLFTS TVSTLESSPS SPDPASFLAE ENSTTRP00000005318/1-518 MAAESEPPPL GVRKPTDFEE LEDGEDLFTS TVSTLESSPS SPDPASLITE BACU013023/1-492 MAAEREPPPL GVGKPTDFEE LEDGEDLFTS TVSTLESSPS SPDPASLITE 51 100 bmy_09017T0/1-332 ---------- ---------- ---------- ---------- ---------- ENSP00000368831/1-519 DISANSNGPK PTEVVLDDDR EDLFAEATEE VSLDSPEREP ILSSEPSPAV ENSBTAP00000035453/1-519 DISTNSNGPK PAEVALDDDR EDLFAEATEE VSLDSPEREP ILSSEPSPAV ENSTTRP00000005318/1-518 DISTNSSGPK PAEVVLDDDR EDLFAEATEE VSLDSPEREP ILSSEPSPAV BACU013023/1-492 DISTNSNGPK PAEVVLDDDR EDLFAEATEE VSLDSPEREP ILSSEPSPAV 101 150 bmy_09017T0/1-332 -----LTFL- ---------- ---------- ---------- ---------- ENSP00000368831/1-519 TPVTPTTLIA PRIESKSMSA PVIFDRSREE IEEEANGDIF DIEIGVSDPE ENSBTAP00000035453/1-519 TPVTPTTLIA PRIESKSMSA PVIFDRSRDE IEEEANGDVF DIEIGVSDPE ENSTTRP00000005318/1-518 TPVTPTTLIA PRIESKSMSA PVIFDRSREE IEEEANGDVF DIEIGVSDPE BACU013023/1-492 TPVTPTTLIA PRIESKSMSA PVIFDRSREE IEEETNGDVF DIEIGVSDPE 151 200 bmy_09017T0/1-332 -VGDGMNAYM AYRVTTKTSL SMFSKSEFSV KRRFSDFLGL HSKLASKYLH ENSP00000368831/1-519 KVGDGMNAYM AYRVTTKTSL SMFSKSEFSV KRRFSDFLGL HSKLASKYLH ENSBTAP00000035453/1-519 KVGDGMNAYM AYRVTTKTSL SMFSKSEFSV KRRFSDFLGL HSKLASKYLH ENSTTRP00000005318/1-518 KVGDGMNAYM AYRVTTKTSL SMFSKSEFSV KRRFSDFLGL HSKLASKYLH BACU013023/1-492 KVGDGMNAYM AYRVTTKTSL SMFSKSEFSV KRRFSDFLGL HSKLASKYLH 201 250 bmy_09017T0/1-332 VGYIVPPAPE KSIVGMTKVK VGKEDSSSTE FVEKRRAALE RYLQRTVKHP ENSP00000368831/1-519 VGYIVPPAPE KSIVGMTKVK VGKEDSSSTE FVEKRRAALE RYLQRTVKHP ENSBTAP00000035453/1-519 VGYIVPPAPE KSIVGMTKVK VGKEDSSSTE FVEKRRAALE RYLQRTVKHP ENSTTRP00000005318/1-518 VGYIVPPAPE KSIVGMTKVK VGKEDSSSTE FVEKRRAALE RYLQRTVKHP BACU013023/1-492 VGYIVPPAPE KSIVGMTKVK VGKEDSSSTE FVEKRRAALE RYLQRTVKHP 251 300 bmy_09017T0/1-332 TLLQDPDLRQ FLESSELPRA VNTQALSGAG ILRMVNKAAD AVNKMTIKMN ENSP00000368831/1-519 TLLQDPDLRQ FLESSELPRA VNTQALSGAG ILRMVNKAAD AVNKMTIKMN ENSBTAP00000035453/1-519 TLLQDPDLRQ FLESSELPRA VNTQALSGAG ILRMVNKAAD AVNKMTIKMN ENSTTRP00000005318/1-518 TLLQDPDLRQ FLE-SELPRA VNTQALSGAG ILRMVNKAAD AVNKMTIKMN BACU013023/1-492 TLLQDPDLRQ FLESSELPRA VNTQALSGAG ILRMVNKAAD AVNKMTIKMN 301 350 bmy_09017T0/1-332 ESDAWFEEKQ QQFENLDQQL RKLHASVEAL VCHRKELSAN TAAFAKSAAM ENSP00000368831/1-519 ESDAWFEEKQ QQFENLDQQL RKLHVSVEAL VCHRKELSAN TAAFAKSAAM ENSBTAP00000035453/1-519 ESDAWFEEKQ QQFENLDQQL RKLHASVEAL VCHRKELSAN TAAFAKSAAM ENSTTRP00000005318/1-518 ESDAWFEEKQ QQFENLDQQL RKLHASVEAL VCHRKELSAN TAAFAKSAAM BACU013023/1-492 ESDAWFEEKQ QQFENLDQQL RKLHASVEAL VCHRKELSAN TAAFAKSAAM 351 400 bmy_09017T0/1-332 LGNSEDHTAL SRALSQLAEV EEKIDQLHQE QAFADFYMFS ELLSDYIRLI ENSP00000368831/1-519 LGNSEDHTAL SRALSQLAEV EEKIDQLHQE QAFADFYMFS ELLSDYIRLI ENSBTAP00000035453/1-519 LGNSEDHTAL SRALSQLAEV EEKIDQLHQE QAFADFYMFS ELLSDYIRLI ENSTTRP00000005318/1-518 LGNSEDHTAL SRALSQLAEV EEKIDQLHQE QAFADFYMFS ELLSDYIRLI BACU013023/1-492 LGNSEDHTAL SRALSQLAEV EEKIDQLHQE QAFADFYMFS ELLSDYIRLI 401 450 bmy_09017T0/1-332 AAVKGVFDHR MKCWQKWEDA QITLLKKRET EAKMMVANKP DKIQQAKNEI ENSP00000368831/1-519 AAVKGVFDHR MKCWQKWEDA QITLLKKREA EAKMMVANKP DKIQQAKNEI ENSBTAP00000035453/1-519 AAVKGVFDHR VKCWQKWEDA QITLLKKRET EAKMMVANKP DKIQQAKNEI ENSTTRP00000005318/1-518 AAVKGVFDHR MKCWQKWEDA QITLLKKRET EAKMMVANKP DKIQQAKNEI BACU013023/1-492 AAVKGVFDHR MKCWQKWEDA QITLLKKRET EAKMMVANKP DKIQQAKNEI 451 500 bmy_09017T0/1-332 RE-------- ---------- ---------- --VINTKCFI --YL------ ENSP00000368831/1-519 REWEAKVQQG ERDFEQISKT IRKEVGRFEK ERVKDFKTVI IKYLESLVQT ENSBTAP00000035453/1-519 REWEAKVQQG ERDFEQISKT IRKEVGRFEK ERVKDFKTVI IKYLESLVQT ENSTTRP00000005318/1-518 REXXXXXXXX XXXXXXXXXX XXXXXXXXXK QRVKDFKTVI IKYLESLVQT BACU013023/1-492 RE-------- ---------- ---------K QRVKDFKTVI IKYLESLVQT 501 550 bmy_09017T0/1-332 -------FTQ IFHDSFIYA ENSP00000368831/1-519 QQQLIKYWEA FLPEAKAIA ENSBTAP00000035453/1-519 QQQLIKYWEA FLPEAKAIA ENSTTRP00000005318/1-518 QQQLIKYWEA FLPEAKAIA BACU013023/1-492 QQQLIKYWEA FLPEAKAIA