KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:45:35 2014 Check: 00 .. Name: ENSP00000359691/1-509 Len: 574 Check: 9384 Weight: 1.00 Name: ENSBTAP00000035459/1-574 Len: 574 Check: 5686 Weight: 1.00 Name: ENSTTRP00000003900/1-509 Len: 574 Check: 3133 Weight: 1.00 Name: bmy_22451T0/1-463 Len: 574 Check: 5313 Weight: 1.00 Name: BACU007944/1-515 Len: 574 Check: 5378 Weight: 1.00 // 1 50 ENSP00000359691/1-509 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000035459/1-574 MNDEGDLLKE DTRDEGNETK ASSVSKLMRT REKVTKLHIF STEVGEMDIS ENSTTRP00000003900/1-509 ---------- ---------- ---------- ---------- ---------- bmy_22451T0/1-463 ---------- ---------- ---------- ---------- ---------- BACU007944/1-515 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000359691/1-509 ---------- -----MNNEE DLLQEDSTRD EGNETEANSM NTLRRTRKKV ENSBTAP00000035459/1-574 NSKEKNRNLR VCHKLGDTDK PVMAPGSPES HLTPDDKDSK DQTVAIKPLS ENSTTRP00000003900/1-509 ---------- -----MNDEG DLLKEXXXXX XXXXXXXXXX XXXXXXXXXX bmy_22451T0/1-463 ---------- ---------- ---------- ----MGLDTR DE-------- BACU007944/1-515 ---------M VCHKLGDTSK PVMGPGSAES HLPEDDKDSK DQTIVIKPLP 101 150 ENSP00000359691/1-509 TKPYVCSTEV GETDMSNSND CMRDSSQILT PPQLSSRMKH IRQAMAKNRL ENSBTAP00000035459/1-574 LPTLINDPGD EFHPNSSDTD NTRDNTQVPT APQLSSRMKH IKQEMAKNHL ENSTTRP00000003900/1-509 XXXXXXXXXX XXXXXXXXXX NTGNSTQIPT APQLSSRMKH IKQEMAKNHL bmy_22451T0/1-463 ---------- ---------D NTRDSTQIPT APQLSSRMKH IKEEMTKNHL BACU007944/1-515 LKASASAPGG EFHPNSSYTD NTRDSTQIPT APQLSSRMKH IKEEMTKNHL 151 200 ENSP00000359691/1-509 QFVRFEATDL HGVSRSKTIP AHFFQEKVSH GVCMPRGYLE VIPNPKDNEM ENSBTAP00000035459/1-574 QFVRFEATDL HGVSRSKSIP AQFFQEKVIH GVYMPRGYLE LIPNPKDNEV ENSTTRP00000003900/1-509 QFVRFEATDL HGVSRSKSIP AQFFQEKVIH GVYMPRGYLE LIPNPKDNEV bmy_22451T0/1-463 QFVRFEATDL HGVSRSKSIP AHFFQEKVIH GVCMPRGYLE LIPNPKDKEV BACU007944/1-515 QFVRFEATDL HGVSRSKSIP AHFFQEKVIH GVCMPRGYLE LIPNPKDKEV 201 250 ENSP00000359691/1-509 NNIRATCFNS DIVLMPELST FRVLPWADRT ARVICDTFTV TGEPLLTSPR ENSBTAP00000035459/1-574 DHIRATCFNS DIVLMPELST FRVLPWAKRT ARVICDTFTV TGEPLLTSPR ENSTTRP00000003900/1-509 DHIRATCFNS DIVLMPELST YRVLPWAERT ARVICDTFTV TGEPLLTSPR bmy_22451T0/1-463 DHIRATCFNS DIVLMPELST FRVLPWAERT ARVICDTFTV TGEPLLTSPR BACU007944/1-515 DHIRATCFNS DIVLMPELST FRVLPWAERT ARVICDTFTV TGEPLLTSPR 251 300 ENSP00000359691/1-509 YIAKRQLSHL QASGFSLLSA FIYDFCIFGV PEILNSKIIS FPALTFLNNH ENSBTAP00000035459/1-574 HIAKRQLSQL QDAGFSLLSA FIYDFCIFGV PEIINSKTIS LPASALLNNH ENSTTRP00000003900/1-509 HIAKRQLSRL QDSGFSLFSA FIYDFCTFGV PEIINSKTIS LPASALLNDH bmy_22451T0/1-463 HIAKRQLSRL QDSGFSLFSA FIYDFCIFGV PEIINSKTIS LPASALLNDH BACU007944/1-515 HIAKRQLSRL RDSGFSLFSA FIYDFCIFGV PEIINSKTIS LPASALLNDH 301 350 ENSP00000359691/1-509 DQPFMQELVD GLYHTGANVE SFSSSTRPGQ MEISFLPEFG ISSADNAFTL ENSBTAP00000035459/1-574 DQLFIQELVD GLYHTGANVE SFSSSTRPGQ MEICFLPEFG ISSADNAFTL ENSTTRP00000003900/1-509 DQPFIQELVD GLYHTGANVE SFSSSTRPGQ MEICFLPEFG ISSADNAFTF bmy_22451T0/1-463 DQPFIQELVD GLYHTGANVE SFSSSTRPGQ MEICFLPEFG ISSADNAFTF BACU007944/1-515 DQPFIQELVD GLYHTGANVE SFSSSTRPGQ MEICFLPEFG ISSADNAFTF 351 400 ENSP00000359691/1-509 RTGVKEVARK YNYIASFFIE TGFCDSGILS HSLWDVDRKK NMFCSTSGTE ENSBTAP00000035459/1-574 RMAVKEVARK YNYITSFFIE TGFCNSGILS HSLWDVDEKK NMFCSNSGIE ENSTTRP00000003900/1-509 RTAVKEVARK YNYITSFFIE TGFCNSGILS HSLWDVDGKK NMFCSSSGME bmy_22451T0/1-463 RTAVKEVARK YNYITSFFIE TGFCNSGILS HSLWDVDGKK NMFCSSSGIE BACU007944/1-515 RTAVKEVARK YNYITSFFIE TGFCNSGILS HSLWDVDGKK NMFCSSSGIE 401 450 ENSP00000359691/1-509 QLTITGKKWL AGLLKHSAAL SCLMAPSVSC RKRYSKDRKD LKKSVPTTWG ENSBTAP00000035459/1-574 QLTIPGKKWL AGLLKHSAAL SCLMAPAVSC RKRYSKESKD LKESVPTTWG ENSTTRP00000003900/1-509 QLTTTGKKWL AGLLKHSAAL SCLMAPAASC RKRYFKDSKD LKESVPTTWA bmy_22451T0/1-463 QLTITGKKWL AGLLKHSAAL SCLMAPAASC RRRYFKESKD LKESVPTTWA BACU007944/1-515 QLTITGKKWL AGLLKHSAAL SCLMAPAASC RRRYFKESKD LKGSVPTTWA 451 500 ENSP00000359691/1-509 YNDNSCIFNI KCHGEKGTRI ENKLGSATAN PYLVLAATVA AGLDGLHSSN ENSBTAP00000035459/1-574 YNDNSCAFNI KCHGEKGTRI ENKLGSATAN PYLVLAATVA AGLDGLYSDD ENSTTRP00000003900/1-509 YNDNSCAFNI KCHGEKGTRI ENKLGSATAN PYLVLAATVA AGLDGLQRND bmy_22451T0/1-463 YNDNSCAFNI KCHGEKGARI ENKLGSATAN PYLVLAATVA AGLDGLQRND BACU007944/1-515 YNDNSCAFNI KCHGEKGARI ENKLGSATAN PYLVLAATVA AGLDGLQRND 501 550 ENSP00000359691/1-509 EVLAGPDEST DFYQVEPSEI PLKLEDALVA LEEDQCLRQA LGETFIRYFV ENSBTAP00000035459/1-574 GVLSGPENST DLHQSKPSEI PLKLEHALMA LEEDQCLRQA LGETFIRYFV ENSTTRP00000003900/1-509 GVLAAPEDGT DLHQPKFSEI PLKLEDALMA LEEDQCLRQA LGETFIRYFV bmy_22451T0/1-463 GVXAAPEDST DLHXSKLFEI PLKLEDALMA LEEDQCLRQA LGETFIRYFV BACU007944/1-515 GVLAAPQDST DLHPSKLFEI PLKLEDALMA LEEDQCLRHA LGETFIRYFV 551 600 ENSP00000359691/1-509 AMKKYELENE EIAAERNKFL EYFI ENSBTAP00000035459/1-574 AMKKYELENE ETDAERNKFL EYFI ENSTTRP00000003900/1-509 AMKKYELESE ETDAERNKFL EYFI bmy_22451T0/1-463 AMKKYELETE ETDAERNKFL EYFI BACU007944/1-515 AMKKYELETE ETDAERNKFL EYFI