KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:45:42 2014 Check: 00 .. Name: ENSP00000380250/1-498 Len: 505 Check: 8602 Weight: 1.00 Name: bmy_12195T0/1-382 Len: 505 Check: 9095 Weight: 1.00 Name: ENSBTAP00000035519/1-493 Len: 505 Check: 7467 Weight: 1.00 Name: ENSTTRP00000002783/1-417 Len: 505 Check: 5503 Weight: 1.00 // 1 50 ENSP00000380250/1-498 MATKTELSPT ARESKNAQDM QVDETLIPRK VPSLCSARYG IALVLHFCNF bmy_12195T0/1-382 MATITELSPT A--GKSSQDV QGDEKLSPGK APSLCSTRYG IAFITHLCNF ENSBTAP00000035519/1-493 ---MTELSPT A--GKNSQDI QGDEKLSPRK APSICSTRYG IAFIVHLCNF ENSTTRP00000002783/1-417 MATMTELSPT A--GKYSQDV QGDEKLSPGK APSLCSTRYG IAFITHLCNF 51 100 ENSP00000380250/1-498 TTIAQNVIMN ITMVAMVNST SPQSQLNDSS EVLPVDSFGG LSKAPKSLPA bmy_12195T0/1-382 IIMAQKVIMN ITMVTMANST NHQSQFNSST EGLPVDSFDD PNNSPKSLPA ENSBTAP00000035519/1-493 ITMAQNIIIN ITMVAMVNST NHQPSFNDST EGLPVDSFGD PNNSPKSLPA ENSTTRP00000002783/1-417 IIMAQNIIMN ITMVTMANST NHQSQFNSST EGLPVDSFDD PNNSPKSLPA 101 150 ENSP00000380250/1-498 KAPVYDWSPQ IQGIIFGAVG YGGILTMAPS GYLAGRVGTK RVVGISLFAT bmy_12195T0/1-382 GASVYDWSPQ IQGIIFSSIN YGMILTLAPS GYLAGRVGTK RVVGAALFGS ENSBTAP00000035519/1-493 RAPVYDWNPQ IQGIIFSAIN YGMILTLAPS GYLAGRVGTK RVVGAALLGS ENSTTRP00000002783/1-417 G--------- ---------- ---------- ---------- ---------- 151 200 ENSP00000380250/1-498 SFLTLCIPLA TDFGIVLLIV TRIVQGLSQS SILGGQFAIW EKWGPPQERS bmy_12195T0/1-382 SFLVLFTPLA ADLGLGFLIA TRILQG---- ---------- ---------- ENSBTAP00000035519/1-493 SLLVLFIPLA ADFGLVFLIA TRILQGMSLG LGYGGQFAIW ERWSPPHERS ENSTTRP00000002783/1-417 ---------- ---GLGY--- ---------- ---GGHFALW ERWSPPNE-S 201 250 ENSP00000380250/1-498 RLCSIALSGM LLGCFTAILI GGFISETLGW PFVFYIFGGV GCVCCLLWFV bmy_12195T0/1-382 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000035519/1-493 RLCGVSISGI LLGTCIAILL GGIISQTLGW PFVFYIFGGF GCICFLLWCV ENSTTRP00000002783/1-417 RLCSIAFSGM MLGSCIAILL GGIISQALGW PFVFCIFGGV GCVSCLLWFV 251 300 ENSP00000380250/1-498 VIYDDPVSYP WISTSEKEYI ISSLKQQVGS SKQPLPIKAM LRSLPIWSIC bmy_12195T0/1-382 ---------- ---------- -------VSS SKQPLPIKAM VRSLPLWSLC ENSBTAP00000035519/1-493 LVYDDPVTHP WINITEKEYI ISSLAQQVSS TKQPLPIKAM VRSLPIWSMC ENSTTRP00000002783/1-417 LIYDDPVTHP WINITEKEYI MSSLAQQVSS SKQPLPIKAM VRSLPLWSLC 301 350 ENSP00000380250/1-498 LGCFSHQWLV STMVVYIPTY ISSVYHVNIR DNGLLSALPF IVAWVIGMVG bmy_12195T0/1-382 FCCFSHQWLI N--------- ---------- -SGFLSALPF IFAWVIGILG ENSBTAP00000035519/1-493 VCCFSHQWLI NIIIIYAPTY ISSVFNIDIR NSGFLSALPF IIAWVICLLG ENSTTRP00000002783/1-417 FCCFSHQWLI NIMVVYTPTY ISSVFNVDIR DSGFLSALPF IFAWVVGILG 351 400 ENSP00000380250/1-498 GYLADFLLTK KFRLITVRKI ATILGSLPSS ALIVSLPYLN SGYITATALL bmy_12195T0/1-382 GYLADFLLTK NFRLVTVRKI ASVLGSLPSS ASLVVLPYVA SSYITAVSLL ENSBTAP00000035519/1-493 SYLADFLLTK NFRLVTVRKI ATVLGNLPSS TFLLVLPYVA SNYIIAVSLL ENSTTRP00000002783/1-417 GYLADFLLTK NFRLVTVRKI ATVLGCLPSS ASLVVLPCLH SSYITAVSLL 401 450 ENSP00000380250/1-498 TLSCGLSTLC QSGIYINVLD IAPRYSSFLM GASRGFSSIA PVIVPTVSGF bmy_12195T0/1-382 TLSCGLSLFS QPGIYINALD IAPRHSSFLM GASRGFAQIS AILAPTVSGF ENSBTAP00000035519/1-493 TLSCGLGLLC QPGVYINALD IAPRHSSFLM GASRAFAQIS AVLAPTVSGF ENSTTRP00000002783/1-417 TLSCGLSLFS QPGIYINALD IAPRHSSFLM GASRGFAQIS AILAPTVSGF 451 500 ENSP00000380250/1-498 LLSQDPEFGW RNVFFLLFAV NLLGLLFYLI FGEADVQEWA KERKLTRL-- bmy_12195T0/1-382 LLSQDPEFGW RNVFSLSFAI NTLGLILYLI FGKADVQDWA KERKLTLTPP ENSBTAP00000035519/1-493 LLSQDPEFGW RNVFSLSFVI NTLGLIFYLI FGKADVQDWA KERKLTHL-- ENSTTRP00000002783/1-417 LLSQDPEFGW RNVFSLSFAI NTLGLILYLI FGKADVQDWA KERKLTRL-- 501 550 ENSP00000380250/1-498 ----- bmy_12195T0/1-382 CMESH ENSBTAP00000035519/1-493 ----- ENSTTRP00000002783/1-417 -----