KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:45:51 2014 Check: 00 .. Name: ENSP00000383210/1-489 Len: 505 Check: 4375 Weight: 1.00 Name: ENSBTAP00000035652/1-495 Len: 505 Check: 1563 Weight: 1.00 Name: bmy_09785T0/1-427 Len: 505 Check: 6952 Weight: 1.00 Name: BACU015781/1-439 Len: 505 Check: 157 Weight: 1.00 // 1 50 ENSP00000383210/1-489 MDDYMVLRMI GEGSFGRALL VQHESSNQMF AMKEIRLPKS FSNTQNSRKE ENSBTAP00000035652/1-495 MDGYRVLRVI GEGSFGRALL VQQESSNRMF AMKEIRLPKS LSDTRISRKE bmy_09785T0/1-427 MDGYTVLRVI GEGSFGRALL VQQESGHQMF AMKEIRLPKS FSDTQNSRKE BACU015781/1-439 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000383210/1-489 AVLLAKMKHP NIVAFKESFE AEGHLYIVME YCDGGDLMQK IKQQKGKLFP ENSBTAP00000035652/1-495 AVLLAKMKHP NIVAFKESFE AEGHLYIVME YCDGGDLMQK IKHQKGKLFP bmy_09785T0/1-427 AVLLAKMKHP NIVAFKESFE A--------- -CQPG----- --------FK BACU015781/1-439 ------MKHP NIVAFKESFE AEGHLYIVME YCDGGDLMQK IKHQKGKLFP 101 150 ENSP00000383210/1-489 EDMILNWFTQ MCLGVNHIHK KRVLHRDIKS KNIFLTQNGK VKLGDFGSAR ENSBTAP00000035652/1-495 EDTILHWFTQ MCLGVNHIHK KRVLHRDIKS KNIFLTQDGK VKLGDFGSAR bmy_09785T0/1-427 GLLILNWFTQ MCLGVNHIHK KRVLHRDIKS KNIFLTQKGK VKLGDFGSAR BACU015781/1-439 EDMILNWFTQ MCLGVNHIHK KRVLHRDIKS KNIFLTQKGK VKLGDFGSAR 151 200 ENSP00000383210/1-489 LLSNPMAFAC TYVGTPYYVP PEIWENLPYN NKSDIWSLGC ILYELCTLKH ENSBTAP00000035652/1-495 LLSSPMAFAC TYVGTPYYVP PEIWENMPYN NKSDIWSLGC ILYELCTLKH bmy_09785T0/1-427 LLSSAMAFAC TYVGTPYYVP PEIWENMPYN NKSDIWSLGC ILYELCTLKH BACU015781/1-439 LLSSAMAFAC TYVGTPYYVP PEIWENMPYN NKSDIWSLGC ILYELCTLKH 201 250 ENSP00000383210/1-489 PFQANSWKNL ILKVCQGCIS PLPSHYSYEL QFLVKQMFKR NPSHRPSATT ENSBTAP00000035652/1-495 PFQANSWKSL ILKICQGSMN PLPSHYSYEL QHLIKQMFKK NPSHRPSATT bmy_09785T0/1-427 PFQANSWKSL ILKICQGSVS PLPSHYSYEL QHLIKQMFKK NPSYRPSATT BACU015781/1-439 PFQANSWKSL ILKICQGSVS PLPSHYSYEL QQLIKQMFKK NPSYRPSATT 251 300 ENSP00000383210/1-489 LLSRGIVARL VQKCLPPEII MEYGEEVLEE IKNSKHNTPR KK-------- ENSBTAP00000035652/1-495 LLSRGSLARL IQKCLPPEII TEYGEQVLEE TKKSMHSTPR KKDPSRTRIT bmy_09785T0/1-427 LLSRGSLARF IQKCLPPEII TEYGEQVLEE TKKSMHSTPR KKDPSRIRIA BACU015781/1-439 LLSRGSLARF IQKCLPPEII TEYGEQVLEE TKKSMHSTPR KKDPSRIRIA 301 350 ENSP00000383210/1-489 --------QE EEQDRKGSHT DLESINENLV ESALRRVNRE EKGNKSVHLR ENSBTAP00000035652/1-495 LENEASTVQR EEPGGKCSHT DLESINKNLV ESALRRVNRE E--------- bmy_09785T0/1-427 LENEASTVQR EEPGGKCSHT DLESINKNSV ESALRRVNRE E--------- BACU015781/1-439 LENEASTVQR EDPGGKCSHT DLESINKNSV ESALRGVNRE E--------- 351 400 ENSP00000383210/1-489 KASSPNLHRR QWEKNVPNTA LTALENASIL TSSLTAEDDR GGSVIKYSKN ENSBTAP00000035652/1-495 KARSPGPLRR QWEKHVPGTA LRALENASIL TSSSTAEDDR GGSVIKYSEN bmy_09785T0/1-427 KASSPGPLRQ QWEKNVSSTA LTALENASLL TSTLTAEDDR ---------- BACU015781/1-439 KASSPGPLRR QWERNVSSTA LTALENASLL TSTLTAEDDR GGSVIKYSEN 401 450 ENSP00000383210/1-489 TTRKQWLKET PDTLLNILKN ADLSLAFQTY TIYRPGSEGF LKGPLSEETE ENSBTAP00000035652/1-495 NTRKQWLKET SETLLNILKN ADLSLAFQTY TIYRPGAEGF LKGPLSEETE bmy_09785T0/1-427 ---------- ---------- ---------- -----GAEGF LKGPLYEETE BACU015781/1-439 NTRKQWLKET PETLLNILKN ADLSLAFQTY TIYRPGAEGF LKGPLYEETE 451 500 ENSP00000383210/1-489 ASDSVDGGHD SVILDPERLE PGLDEEDTDF EEEDDNPDWV SELKKRAGWQ ENSBTAP00000035652/1-495 ASDDVDGGWD SVILDPERLE HGLDEEDTDF -EEDDSADWV SELKQRTGWQ bmy_09785T0/1-427 ASDDVDGSHD SVILDPERLE PGLDEEDTDF -EEDDNSDWV SELKQRAGWQ BACU015781/1-439 ASDDVDGSHD SVILDPERLE PGLDEEDTDF -EEDDSSDWV SELKQRAGWR 501 550 ENSP00000383210/1-489 GLCDR ENSBTAP00000035652/1-495 GVSDG bmy_09785T0/1-427 GVSDG BACU015781/1-439 GASDG