KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:45:53 2014 Check: 00 .. Name: bmy_03580T0/1-200 Len: 382 Check: 9560 Weight: 1.00 Name: ENSTTRP00000002096/1-212 Len: 382 Check: 7048 Weight: 1.00 Name: ENSP00000441640/1-357 Len: 382 Check: 7410 Weight: 1.00 Name: BACU010789/1-202 Len: 382 Check: 3508 Weight: 1.00 Name: ENSBTAP00000035666/1-378 Len: 382 Check: 7542 Weight: 1.00 // 1 50 bmy_03580T0/1-200 ---------- ---------M TDHSFGHGPA LRFGD----- ---------- ENSTTRP00000002096/1-212 ---------- -LGDQFYKEA IEHCRSYNSR LCAERSVRLP FLDSQTGVAQ ENSP00000441640/1-357 MATVIHNPLK ALGDQFYKEA IEHCRSYNSR LCAERSVRLP FLDSQTGVAQ BACU010789/1-202 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000035666/1-378 KLNVLADPMQ KLGDQFYKEA IEHCRSYNSR LCAERSVRLP FLDSQTGVAQ 51 100 bmy_03580T0/1-200 -----WGNKP GKTEGISPKQ EHLSQGQGLA QKGPDGTVIP NNYCDFCLGG ENSTTRP00000002096/1-212 NNCYIWMEKR HRGPGLAPGQ LYTYPARCWR KK---RRLHP PEDPKLRLLE ENSP00000441640/1-357 NNCYIWMEKR HRGPGLAPGQ LYTYPARCWR KK---RRLHP PEDPKLRLLE BACU010789/1-202 ------MEKR HRGPGLAPGQ LYTYPARCWR KK---RRLHP PEDPKLRLLE ENSBTAP00000035666/1-378 NNCYIWMEKR HRGPGLAPGQ LYTYPARCWR KK---RRLHP PEDPKLRLLE 101 150 bmy_03580T0/1-200 SNMNKKSGRP EELVSCADCG RSAHLGGEGR KEKEAAAAAR TTEDLFGSTS ENSTTRP00000002096/1-212 IKPEVELPLK KDGFTSESTT LEALLRGEGI EKKVDTREEE NIQEI-QRVL ENSP00000441640/1-357 IKPEVELPLK KDGFTSESTT LEALLRGEGV EKKVDAREEE SIQEI-QRVL BACU010789/1-202 IKPEVELPLK KDGFTSESTT LEALLRGEGI EKKVDTREEE NIQEI-QRVL ENSBTAP00000035666/1-378 IKPEVELPLK KDGFTSESTT LEALLRGEGV EKKVDAREEE NIQEI-QRVL 151 200 bmy_03580T0/1-200 ESDTSTFHGF DEDDLEE--P R---SCRGRR SGRGYIQQKH RLLKR-NRTK ENSTTRP00000002096/1-212 ENDENVEEGN EEEDLEEDIP KRKNRTRGRX XXXXXXXXXX XXXXXXXXXX ENSP00000441640/1-357 ENDENVEEGN EEEDLEEDIP KRKNRTRGRA RGSAGGRRRH DAASQEDHDK BACU010789/1-202 ENDENVEEGN EEEDLEEDIP KRKNRTRGRA RGSTGGRRRH DAASQEDHDK ENSBTAP00000035666/1-378 ENDENVEEGN EEEDLEEDIP KRKNRTRGRA RGSAGGRRRH DAASQEDHDK 201 250 bmy_03580T0/1-200 ERITVLQRDG IREREGKSKK LNQ-HY--DP GTPASFKQAI SEEGGKKP-- ENSTTRP00000002096/1-212 XXXXXXXXXX XXXXXXXXXX XMH-IFTT-- ---------- ---------- ENSP00000441640/1-357 PYVCDICGKR YKNRPGLSYH YAHTHLASEE GDEAQDQETR SPPNHRNENH BACU010789/1-202 PYVCDICGKR YKNRPGLSYH YAHTHLASEE GDEAQDQETR SPPNHRNENH ENSBTAP00000035666/1-378 PYVCDICGKR YKNRPGLSYH YAHTHLASEE GDEAQDQETR SPPNHRNENH 251 300 bmy_03580T0/1-200 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002096/1-212 ---------- ---------- ---------- ---------- ---------- ENSP00000441640/1-357 RPQKGPDGTV IPNNYCDFCL GGSNMNKKSG RPEELVSCAD CGRSAH---- BACU010789/1-202 RRSD------ ---------- ---------- ---------- ---------- ENSBTAP00000035666/1-378 RPQKGPDGTV IPNNYCDFCL GGSNMNKKSG RPEELVSCAD CGRSGHPTCL 301 350 bmy_03580T0/1-200 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002096/1-212 ---------- ---------- ---------- ---------- ---------- ENSP00000441640/1-357 ---LGGEGRK EKEAAAAART TEDLFGSTSE SDTSTFHGFD ---------- BACU010789/1-202 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000035666/1-378 QFTLNMTEAV KTYKWQCIEC KSCILCGTSE NDDQLLFCDD CDRGYHMYCL 351 400 bmy_03580T0/1-200 ---------- ---------- ---------- -- ENSTTRP00000002096/1-212 ---------- ---------- ---------- -- ENSP00000441640/1-357 ----EDDLEE PRSCRGRRSG RGSPTADKKG SC BACU010789/1-202 ---------- ---IYLPLAF L--------- -- ENSBTAP00000035666/1-378 NPPVAEPPEG SWSCHLCWEL LKEKASAFGC QA