KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:45:54 2014 Check: 00 .. Name: ENSTTRP00000007147/1-1022 Len: 1025 Check: 7370 Weight: 1.00 Name: ENSP00000355090/1-1023 Len: 1025 Check: 818 Weight: 1.00 Name: ENSBTAP00000035705/1-986 Len: 1025 Check: 4308 Weight: 1.00 Name: bmy_21490T0/1-1021 Len: 1025 Check: 5522 Weight: 1.00 Name: BACU008556/1-504 Len: 1025 Check: 5958 Weight: 1.00 // 1 50 ENSTTRP00000007147/1-1022 MWDQRLVRLA VVQQLRAVYG VKVKGGRGQC DRRRQETAAT EIVGKIFGVP ENSP00000355090/1-1023 MWDQRLVRLA LLQHLRAFYG IKVKGVRGQC DRRRHETAAT EIGGKIFGVP ENSBTAP00000035705/1-986 MWDQRLVRLA VVQQLRAAYG IKVKGGRAQC DRRRQETATT EIVGKIFGVP bmy_21490T0/1-1021 MWDQRLVRLA VVQQLRAVYG IKVKGGRGQC DRRRQETAAT EIVGKIFGVP BACU008556/1-504 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000007147/1-1022 FNALPQSVVP EYGHIPSFLV DACTSLEEHI HTEGLFRKSG SVIRLKALKN ENSP00000355090/1-1023 FNALPHSAVP EYGHIPSFLV DACTSLEDHI HTEGLFRKSG SVIRLKALKN ENSBTAP00000035705/1-986 LNALPQSIVP EYGHIPSFLV DACTSLEEHV HTEGLFRKSG SVIRLKALKN bmy_21490T0/1-1021 FNALPQSVVP EYGHIPSFLV DACTSLEEHI HTEGLFRKSG SVIRLKALKN BACU008556/1-504 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000007147/1-1022 KLDHGERCLS SAPACDIAGL LKQFFRELPE PILPADLHEA LFKAQQLRTE ENSP00000355090/1-1023 KVDHGEGCLS SAPPCDIAGL LKQFFRELPE PILPADLHEA LLKAQQLGTE ENSBTAP00000035705/1-986 KLDHGERCLS SAPPCDTAGL LKQFFRELPE PILPADLHEA LFKAQQLKTE bmy_21490T0/1-1021 KLDHGERCLS SAPPCDIAGL LKQFFRELPE PILPADLHEA LFKAQQLRXE BACU008556/1-504 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000007147/1-1022 EKNKATLLLS CLMADHTIDI LRYFFNFLRK VSLRCSENKM DSSNLAVIFA ENSP00000355090/1-1023 EKNKATLLLS CLLADHTVHV LRYFFNFLRN VSLRSSENKM DSSNLAVIFA ENSBTAP00000035705/1-986 EKNKATLLLS CLMADHTIDI LRYFFNFLRK VSLRSSENKM DSSNLAVIFA bmy_21490T0/1-1021 EKNKATLLLS CLMADHTIDI LRYFFNFLRK VSLRCSENKM DSSNLAVIFA BACU008556/1-504 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000007147/1-1022 PNLLQTSEGH EKMSANTEKK LRLQAAVVQT LIDYASDIGH VPDFILEKIP ENSP00000355090/1-1023 PNLLQTSEGH EKMSSNTEKK LRLQAAVVQT LIDYASDIGR VPDFILEKIP ENSBTAP00000035705/1-986 PNLLQTSEGH EKMSANTEKK LRLQAAVVQT FIDYASDIGH VPDFILEKIP bmy_21490T0/1-1021 PNLLQTSEGH EKMSANTEKK LRLQAAVVQT LIDYASDIGH VPDFILGKIP BACU008556/1-504 ---------- ---------- ---------- ---------- ---------- 251 300 ENSTTRP00000007147/1-1022 AMLGIDELCA TPSLEGFEEG DYETPGDCKR KRRQSVGDFV SGALNKLKSN ENSP00000355090/1-1023 AMLGIDGLCA TPSLEGFEEG EYETPGEYKR KRRQSVGDFV SGALNKFKPN ENSBTAP00000035705/1-986 AMLGIDGLCA TPSLEGFEEG DYETPGDYKR KRRQSVGDFV SGALNKFKSN bmy_21490T0/1-1021 AMLGIDDLCA TPSLEGFEEG DYETPGDYKR KRRQSVGDFV SGALNKFKSN BACU008556/1-504 ---------- ---------- ---------- ---------- ---------- 301 350 ENSTTRP00000007147/1-1022 RTPSITPQQE RTAQLSISPM ILTPNAKRKL PVD-SHGFSS KKRKSIKHNC ENSP00000355090/1-1023 RTPSITPQEE RIAQLSESPV ILTPNAKRTL PVDSSHGFSS KKRKSIKHNF ENSBTAP00000035705/1-986 RTPSITPQQE RIAQLSVSPT ILTPNAKRKL PVD-SHGLSS KKRKSIKHNF bmy_21490T0/1-1021 RTPSITPQQE RTAQLSISPM ILTPNAKRKL PVD-SHGFSS KKRKSIKHSF BACU008556/1-504 ---------- ---------- ---------- ---------- ---------- 351 400 ENSTTRP00000007147/1-1022 NFELLPGNLF SSTSTPVSVH FDTSPEGSSQ SSLSPVAVNG NHLISTGVLR ENSP00000355090/1-1023 NFELLPSNLF NSSSTPVSVH IDTSSEGSSQ SSLSPVLIGG NHLITAGVPR ENSBTAP00000035705/1-986 NFELLPSNLF SSSSTPISVH CDTSPEGSSQ SSFSPVAISG NHLISTNVLR bmy_21490T0/1-1021 NFELLPGNLF SSTSTPVSVH FDTSPEGSSQ SSLSPVAVNG NHLISTGVLR BACU008556/1-504 ---------- ---------- ---------- ---------- ---------- 401 450 ENSTTRP00000007147/1-1022 RSKRLASKKV CRVESGKADC FSPKISRKEK VRRSLRLKFN LGKSSKDGNV ENSP00000355090/1-1023 RSKRIAGKKV CRVESGKAGC FSPKISHKEK VRRSLRLKFN LGKNGREVNG ENSBTAP00000035705/1-986 RSKRLASKKV CRVESGKAGC FSPKISRKEK VRRSLRLKFN LGKNSKDGNE bmy_21490T0/1-1021 RSKRLASKKV CRVESGKADC FSPKISRKEK VRRSLRLKFN LGKSSKDGNV BACU008556/1-504 ---------- ---------- ---------- ---------- ---------- 451 500 ENSTTRP00000007147/1-1022 CSGVDRSENV GRRLANQQSL KNRIESVKTG LLFSPYIDER LTKKXXXXXX ENSP00000355090/1-1023 CSGVNRYESV GWRLANQQSL KNRIESVKTG LLFSPDVDEK LPKKGSEKIS ENSBTAP00000035705/1-986 CSGVNRSENV GRRLANQQSL KNRIDSVKTG LLFSPDTDER LTQKGSKKIS bmy_21490T0/1-1021 CSGVDRSENV GRRLANQQSL KNRIESVKTG LLFSPYIDER LTKKGSKKIS BACU008556/1-504 ---------- ---------- ---------- ---------- ---------- 501 550 ENSTTRP00000007147/1-1022 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000355090/1-1023 KSEETLLTPE RLVGTNYRMS WTGPNNSSFQ EVDANEASSM VENLEVEN-S ENSBTAP00000035705/1-986 KSEENLLTPE QLSGTNYRIS WIGPSNSDFQ EVDGNEASPI DGTLEVENSS bmy_21490T0/1-1021 KSEENLLTPE QLGGRNYRMS WTGPSNSSFQ EIDGNEASPI DVILEVENSS BACU008556/1-504 ---------- --------MS WTGPSNSSFQ EIDGNEASPI DAILEVENSS 551 600 ENSTTRP00000007147/1-1022 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000355090/1-1023 LEPDIMVEKS PATSCELTPS NLNNKHNSNI TSSPLSGDEN NMTKETLVKV ENSBTAP00000035705/1-986 LEPDMMVEKS PVSSSGLTPP NVHSQHSNNT TGSSLSGDEN NLTTETVVKI bmy_21490T0/1-1021 LEPNMMVEKS PVRSYELAPS NVHSRRNNNV TGSSLSGDEN NLTTETVVKI BACU008556/1-504 LEPNMMVEKS LVMSYEFAPS NVHSRHNNNV TGSSLSGDEN NLTTETVVKI 601 650 ENSTTRP00000007147/1-1022 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000355090/1-1023 QKAFSESGSN LHALMNQRQS SVTNVGKVKL TEPSYLEDSP EENLFETNDL ENSBTAP00000035705/1-986 QKAFSESGSN LHALINHKQS SLTNVEKVKF N--------- -------TNL bmy_21490T0/1-1021 QKAFSESGSN LHALINHRQS SLTNVGKVKF NETSSIKCSP EENLFETNNF BACU008556/1-504 QKAFSESGSN LHALINHRQS SLTNVGKVKF NETSSIKCSP EENLFETNNF 651 700 ENSTTRP00000007147/1-1022 XXXXXX-XXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000355090/1-1023 TIVESKEKYE HHTGKGEKCF SERDFSPLQT QTFNRETTIK CYSTQMKMEH ENSBTAP00000035705/1-986 TVIESN---G HHTSNNEDSF SERDFSLHQP QKSDREATVK CYSTQLKIQL bmy_21490T0/1-1021 TVIESN---E HHTSKDENSF SERDFSLHQT QKLGREATIK CYSTQMKIEL BACU008556/1-504 PVIESN---E HHTSKDENSF SERDFSLHQT QKLGREATIK CYSTQMKIEL 701 750 ENSTTRP00000007147/1-1022 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000355090/1-1023 EKDIHSNMPK DYLSKQEFSS DEEIKKQQSP KDKLNNKLKE NENMMEGNLP ENSBTAP00000035705/1-986 ENNIHFNIPT DYLSKQELPS DEHVRKQESP RDTLNTKLKE NENLME---- bmy_21490T0/1-1021 EDNIHSNIPK DYLSKQELPS DEQIKKQESP RDTLNTKLKE NENMIEENLL BACU008556/1-504 EDNIHSNIPK DYLSKQELPS DEQIKKQESP RDTLNTKLKE NENMIEENLL 751 800 ENSTTRP00000007147/1-1022 XXXXXXXXXX XXXXXXXXXX XXXNLSK-RR VRINKQQSLV ETCDKTVSEH ENSP00000355090/1-1023 KCAAHSKDEA RSSFSQQSTC VVTNLSKPRP MRIAKQQSL- ETCEKTVSES ENSBTAP00000035705/1-986 -------VVA STSSLGQSTC SSTNLSKPSP GGIIKQQSPV ETRDETVSEC bmy_21490T0/1-1021 KCAASREDVA SASSSEQITC NSANLSKPSP VRIVKQQSLV ETRDKTVSEH BACU008556/1-504 KCAASREYVA SASSSEQITC DSANLSKPRP VRVVKQQSLV ETCDKTVSEH 801 850 ENSTTRP00000007147/1-1022 LQMTEHGKVS DHIQWFNNLS LNEPNRTKVK SPLKFQRMPV RQSVRRINSL ENSP00000355090/1-1023 SQMTEHRKVS DHIQWFNKLS LNEPNRIKVK SPLKFQRTPV RQSVRRINSL ENSBTAP00000035705/1-986 LQMTKHGRVS DHIQWFNNLS LNEPNRTKVK SPLKFQRTPV RQSVRRISSL bmy_21490T0/1-1021 LQMTEHGKVS DHIQWFNNLS LNEANRTKVK SPLKFQRMPV RQSVRRMNSL BACU008556/1-504 LQMTEHGKVS DHIQWFNNLS LNEPNRTKVK SPLKFQRMPV RQSVRRINSL 851 900 ENSTTRP00000007147/1-1022 LLYGGQPPRH KLARLGDAAS PLVKSVSCDS ALPSRVECTS KDSSIPCTRS ENSP00000355090/1-1023 LEYSRQPTGH KLASLGDTAS PLVKSVSCDG ALSSCIESAS KDSSVSCIKS ENSBTAP00000035705/1-986 LEYGGQPPRR KLASLGDTAS PLVKSVSCES ALPSCVESMT KDSSHPCTRS bmy_21490T0/1-1021 LLCGGQPPRH KLASLGDAAS PLVKSVSCDS ALPSRVECAS KNSSIPWTRS BACU008556/1-504 LLYGGQPPRH KLASLGEAAS PLVKSVSCDS ALPSRVECAP KDSSIPCTRW 901 950 ENSTTRP00000007147/1-1022 SPKEQKATSC KQSNVDAISK SSMEVTSTSF SQMKRHPNSG NASLGSTRVC ENSP00000355090/1-1023 GPKEQKSMSC EESNIGAISK SSMELPSKSF LKMRKHPDSV NASLRSTTVY ENSBTAP00000035705/1-986 GPKEQKSSSC KQSNIDMISK SSME------ --MKRHPNSV NASLGSTRVC bmy_21490T0/1-1021 SPKEQKSTSC KQSNVDTISK SSMEVTSTSF SQMKRHPNSG NASLGSTRVC BACU008556/1-504 SPKEQKSTSC KQSNVDTISK SSTEVTSTSF SQMKRHPNSG NASLGSTRVC 951 1000 ENSTTRP00000007147/1-1022 KQEVISNGQI KVPLDDLTNH DIVKSVVNND MGFSRGINNR VLRRPSDKER ENSP00000355090/1-1023 KQKILSDGQV KVPLDDLTNH DIVKPVVNNN MGISSGINNR VLRRPSERGR ENSBTAP00000035705/1-986 KQEVISNSQI KVPLDDLTNH DIVKSIVSND KVFPPGVNSR VLRKPSEKER bmy_21490T0/1-1021 KQEVISNGQI KVPLDDLTNH DIVKSVVNND MGFSRGINNR VLRRPSEKER BACU008556/1-504 KQEVISNGQI KVPLDDLTNH DIVKSVVNND MGFSRGINNR VLRRPSEKER 1001 1050 ENSTTRP00000007147/1-1022 VWYKGSPKNP IGKAQLLPTS RPVDL ENSP00000355090/1-1023 AWYKGSPKHP IGKTQLLPTS KPVDL ENSBTAP00000035705/1-986 IWYKGSPKNP IGKLQLLPTS KPVDL bmy_21490T0/1-1021 VWYKGSPKNP IGKAQLLPTS RPVDL BACU008556/1-504 VWYKGSPKNP IGKAQLLPTS RPVDL