KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:45:55 2014 Check: 00 .. Name: ENSTTRP00000003192/1-355 Len: 464 Check: 3566 Weight: 1.00 Name: ENSP00000267814/1-357 Len: 464 Check: 3061 Weight: 1.00 Name: BACU002847/1-464 Len: 464 Check: 6863 Weight: 1.00 Name: ENSBTAP00000035716/1-356 Len: 464 Check: 4466 Weight: 1.00 Name: bmy_12683T0/1-332 Len: 464 Check: 7023 Weight: 1.00 // 1 50 ENSTTRP00000003192/1-355 ---------- ---------- ---------- ---------M AAAKPENLSL ENSP00000267814/1-357 ---------- ---------- ---------- --------MA AAAKPNNLSL BACU002847/1-464 MFQGQRGWFC RSVSRNLRQF WVDEGGTISD PRAADFLFSC DASHPDTLST ENSBTAP00000035716/1-356 ---------- ---------- ---------- ---------M AAAKPENLSL bmy_12683T0/1-332 ---------- ---------- ---------- ---------M AAAKPENLSL 51 100 ENSTTRP00000003192/1-355 --------VV HGPGDLRLEN YPIPE----- -PG-----PN E--------- ENSP00000267814/1-357 --------VV HGPGDLRLEN YPIPE----- -PG-----PN E--------- BACU002847/1-464 EKHFIRTPVV EKQMYFPLQN YPVNNMVTAA GSGGTAEDPN SPCSLCGLPT ENSBTAP00000035716/1-356 --------VV HGPGDLRLEN YPIPE----- -PG-----PN E--------- bmy_12683T0/1-332 --------VV HGPGDLRLEN YPIPE----- -PG-----PN E--------- 101 150 ENSTTRP00000003192/1-355 ---------- ---------- ---------- ---------- -VLLKMHSVG ENSP00000267814/1-357 ---------- ---------- ---------- ---------- -VLLRMHSVG BACU002847/1-464 ALVKGHAVVD DVDPDGLSQK NQVIGTAPSG VQERRCSFAQ VVLLKMHSVG ENSBTAP00000035716/1-356 ---------- ---------- ---------- ---------- -VLLKMHSVG bmy_12683T0/1-332 ---------- ---------- ---------- ---------- -VLLKMHSVG 151 200 ENSTTRP00000003192/1-355 ICGSDVHYWQ HGRIGDFVVK KPMVLGHEAS GTVVKVGSLV KHLKPGDRVA ENSP00000267814/1-357 ICGSDVHYWE YGRIGNFIVK KPMVLGHEAS GTVEKVGSSV KHLKPGDRVA BACU002847/1-464 ICGSDVHYWQ HGRIGDFVVK KPMVLGHEAS GTVVKVGSLV KHLKPGDRVA ENSBTAP00000035716/1-356 ICGSDVHYWQ HGRIGDFVVK KPMVLGHEAS GTVVKVGSLV RHLQPGDRVA bmy_12683T0/1-332 ICGSDVHYWQ HGRIGDFVVK KPMVLGHEAS GTVIKVGSLV KHLKPGDRVA 201 250 ENSTTRP00000003192/1-355 IEPGAPREAD EFCKIGRYNL SPTIFFCATP PDDGNLCRFY KHNANFCYKL ENSP00000267814/1-357 IEPGAPREND EFCKMGRYNL SPSIFFCATP PDDGNLCRFY KHNAAFCYKL BACU002847/1-464 IEPGAPREAD EFCKIGRYNL SPTIFFCATP PDDGNLCRFY KHNANFCYKL ENSBTAP00000035716/1-356 IEPGAPRETD EFCKIGRYNL SPTIFFCATP PDDGNLCRFY KHNANFCYKL bmy_12683T0/1-332 IEPGAPREAD EFCKIGRYNL SPTIFFCATP PDDGNLCRFY KHNANFCYKL 251 300 ENSTTRP00000003192/1-355 PDNVTFEEGA LIEPLSVGIH ACRRAGVTLG HKVFVCGAGP IGLVSLLVAK ENSP00000267814/1-357 PDNVTFEEGA LIEPLSVGIH ACRRGGVTLG HKVLVCGAGP IGMVTLLVAK BACU002847/1-464 PDNVTFEEGA LIEPLSVGIH ACRRAGVTLG HRVFVCGAGP IGLVSLLVAK ENSBTAP00000035716/1-356 PDNVTFEEGA LIEPLSVGIH ACRRAGVTLG NKVLVCGAGP IGLVSLLAAK bmy_12683T0/1-332 V--------- ---PMA---H LCH-----LG PLL----QWP IGLVSLLVAK 301 350 ENSTTRP00000003192/1-355 AMGASQVVVT DLSASRLSKA KEVGAD-SLQ XXXXXXXXXX XXXXXXXXXX ENSP00000267814/1-357 AMGAAQVVVT DLSATRLSKA KEIGADLVLQ ISKESPQEIA RKVEGQLGCK BACU002847/1-464 AMGASQVVVT DLSASRLSKA KEVGADFLLQ ISNESPQEIA NKVEGLLGCK ENSBTAP00000035716/1-356 AMGAAQVVVT DLSASRLSKA KEVGADFILQ ISNESPQEIA KKVEGLLGSK bmy_12683T0/1-332 AMGASQVVVT DLSASRLSKA KEVGADFLLQ ISNESPQEIA NKVEGLLGCK 351 400 ENSTTRP00000003192/1-355 XXXXXXXXXX XXXXXXXXXA TQSGGTLVLV GLGSEMTSVP LVHAATREVD ENSP00000267814/1-357 PEVTIECTGA EASIQAGIYA TRSGGNLVLV GLGSEMTTVP LLHAAIREVD BACU002847/1-464 PEVTIECTGV ETSIQAGIYA TQSGGTLVLV GLGSEMTSVP LVHAATREVD ENSBTAP00000035716/1-356 PEVTIECTGV ETSIQAGIYA THSGGTLVLV GLGSEMTSVP LVHAATREVD bmy_12683T0/1-332 PEVTIECTGV ETSIQAGIYA TQSGGTLVLV GLGSEMTSVP LVHAATREVD 401 450 ENSTTRP00000003192/1-355 IKGVFRYCNT WPMAISMLAS KSVNVKPLVT HRFPLEKALE AFETSKKGLG ENSP00000267814/1-357 IKGVFRYCNT WPVAISMLAS KSVNVKPLVT HRFPLEKALE AFETFKKGLG BACU002847/1-464 IKGVFRYCNT WPMAISMLAS KSVNVKPLVT HRFPLEKALE AFETSKKGLG ENSBTAP00000035716/1-356 IKGVFRYCNT WPMAISMLAS KSVNVKPLVT HRFPLEKALE AFETSKKGLG bmy_12683T0/1-332 IKGVFRYCNT WPMAISMLAS KSVNVKPLVT HRFPLEKALE AFETSKKGLG 451 500 ENSTTRP00000003192/1-355 LKVMIKCDPK DQNP ENSP00000267814/1-357 LKIMLKCDPS DQNP BACU002847/1-464 LKVMIKCDPK DQNP ENSBTAP00000035716/1-356 LKVMIKCDPN DQNP bmy_12683T0/1-332 LKVMIKCDPK DQNP