KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:45:56 2014 Check: 00 .. Name: bmy_16295T0/1-192 Len: 496 Check: 9924 Weight: 1.00 Name: ENSTTRP00000007881/1-315 Len: 496 Check: 2686 Weight: 1.00 Name: ENSP00000293604/1-496 Len: 496 Check: 9408 Weight: 1.00 Name: ENSBTAP00000035760/1-315 Len: 496 Check: 3745 Weight: 1.00 // 1 50 bmy_16295T0/1-192 ------LQTQ RLTASLEPAA VRKR------ ---------- ---------- ENSTTRP00000007881/1-315 MYQPSRGAAR RLGPCLRAYQ ARPQ------ ---------- ---------- ENSP00000293604/1-496 MYQPSRGAAR RLGPCLRAYQ ARPQVSGGEE GGRRGGGERP SSKPVRGAER ENSBTAP00000035760/1-315 MYQPSRGAAR RLGPCLRAYQ ARPQ------ ---------- ---------- 51 100 bmy_16295T0/1-192 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007881/1-315 ---------- ---------- ---------- ---------- ---------- ENSP00000293604/1-496 ALGSAQAQRH PPPLPTCALQ RVDRLGVAGA GGRRCRACRA RTSVLPGLRA ENSBTAP00000035760/1-315 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_16295T0/1-192 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007881/1-315 ---------- ---------- ---------- ---------- ---------- ENSP00000293604/1-496 VRRGQGQAAG RVCVAPDSPR LPVPRGDLKG RGREIRSPAA APSRSSPAQT ENSBTAP00000035760/1-315 ---------- ---------- ---------- ---------- ---------- 151 200 bmy_16295T0/1-192 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007881/1-315 ---------- ---------- ---------- ---------- ---------- ENSP00000293604/1-496 RPAGRPQQPA RLALGERSWQ EGRPVCTRFG PLRPGWQDGH APSRDGASRT ENSBTAP00000035760/1-315 ---------- ---------- ---------- ---------- ---------- 201 250 bmy_16295T0/1-192 ---------- ATSPFP---- ---------S PQTFTP---- ---------- ENSTTRP00000007881/1-315 -----DHLSP RALPFPPLWP HSVTTTSPSL PLFWSPPPPS PPTRLLPRAP ENSP00000293604/1-496 PSGTEDQLYP GTLPFPPLWP HSTTTTSPSS PLFWSPLPPR LPTQRLPQVP ENSBTAP00000035760/1-315 -----DQSSP WALPFPPLWP HSTTTTSPSL PLFWSPPPPS PPTRLLPPAP 251 300 bmy_16295T0/1-192 PLPFP----- ---------- ---------- ---------- -FKKP----- ENSTTRP00000007881/1-315 PLPLPQVQAL TSPWVVLPPG KGEEGPGPEL HSGCLDGLRS LFEGPPCPCP ENSP00000293604/1-496 PLPLPQIQAL SSAWVVLPPG KGEEGPGPEL HSGCLDGLRS LFEGPPCPYP ENSBTAP00000035760/1-315 PLPLPQVQAL TSPWVVLPPG KGEEGPGPEL LSGCLDGLRS LFEGPPCPCP 301 350 bmy_16295T0/1-192 -------APG HAHPCEEAGH GRRSLHSR-K IMYQPSRGA- ---------- ENSTTRP00000007881/1-315 GALIPFQASG TAHSSPATPS GDPSMEEHLA VMYERLRQEL PSLFLHSHDY ENSP00000293604/1-496 GAWIPFQVPG TAHPSPATPS GDPSMEEHLS VMYERLRQEL PKLFLQSHDY ENSBTAP00000035760/1-315 GALIPFQAPG TAHPSPATPS GDPSMEEHLA VMYERLRQEL PNLFLHSHDY 351 400 bmy_16295T0/1-192 ---------- ---------- ----ARRLGP C-LRAYQARP QLRLEVLQLT ENSTTRP00000007881/1-315 TLYSSDVEFI NEILNMRTKG RTWYXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000293604/1-496 SLYSLDVEFI NEILNIRTKG RTWYILSLTL CRFLAWNYFA HLRLEVLQLT ENSBTAP00000035760/1-315 TLYSSDVEFI NEILNMRTKG RTWYILSLTL CRFLAWNYFA QLRLEILQLT 401 450 bmy_16295T0/1-192 RHPENWTLQA RWRLVGLPIH LLFLRFYKRD KEELYRTYDA YSTFYLNSEG ENSTTRP00000007881/1-315 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXTYDA YSTFYLNSNG ENSP00000293604/1-496 RHPENWTLQA RWRLVGLPVH LLFLRFYKRD KDEHYRTYDA YSTFYLNSSG ENSBTAP00000035760/1-315 RHPENWTLQA RWRLVGLPIH LLFLRFYKRD KEELYRTYDA YSTFYLNSNG 451 500 bmy_16295T0/1-192 LICRHRLDKL MPSHSPPTPV KKLLVGALVA LGLSEPEPNL HLCSKG ENSTTRP00000007881/1-315 LICRHRLDKL MPSHSPPTPV KKLLVGALVA LGLSEPEPNL HLCSKG ENSP00000293604/1-496 LICRHRLDKL MPSHSPPTPV KKLLVGALVA LGLSEPEPDL NLCSKP ENSBTAP00000035760/1-315 LICRHRLDKL MPSHSPPAPV KKLLVGALVA LGLSEPEPNL HLCSKD