KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:45:59 2014 Check: 00 .. Name: bmy_07702T0/1-792 Len: 1017 Check: 733 Weight: 1.00 Name: BACU016389/1-536 Len: 1017 Check: 728 Weight: 1.00 Name: ENSP00000388940/1-706 Len: 1017 Check: 8913 Weight: 1.00 Name: ENSBTAP00000035793/1-683 Len: 1017 Check: 241 Weight: 1.00 Name: ENSTTRP00000010258/1-690 Len: 1017 Check: 4050 Weight: 1.00 // 1 50 bmy_07702T0/1-792 ---------- ---------- ---------- ---------- ---------- BACU016389/1-536 ---------- ---------- ---------- ---------- ---------- ENSP00000388940/1-706 MNPQQQRMAA IGTDKELSDL LDFSAMFSPP VNSGKTRPTT LGSSQFSGSG ENSBTAP00000035793/1-683 MNPQQQRMAA IGTDKELSDL LDFSAMFSPP VNSGKTRPTT LGSSQFSGSG ENSTTRP00000010258/1-690 ---------- ------LSDL LDFSAMFSPP VNSGKTRPTT LGSSQFSGSG 51 100 bmy_07702T0/1-792 ---------- ---------- ---------- ---------- ---------- BACU016389/1-536 ---------- ---------- ---------- MYCAY----- --------PV ENSP00000388940/1-706 IDERGGTTSW GTSGQPSPSY DSSRGFTDSP HYSDHLNDSR LGAHEGLSPT ENSBTAP00000035793/1-683 MDERGGTTSW GTSGQPSPSY DSSRGFTDSP HYSDHLNDSR LGAHEGLSPT ENSTTRP00000010258/1-690 MDERGGTTSW GTSGQPSPSY DSSRGFTDSP HYSDHLNDSR LGAHEGLSPT 101 150 bmy_07702T0/1-792 ---------- ---------- ---------- ---------- ---------- BACU016389/1-536 P--------- ---------- ---------- --------GM GSNSLM---- ENSP00000388940/1-706 PFMNSNLMGK TSERGSFSLY SRDTGLPGCQ SSLLRQDLGL GSPAQLSSSG ENSBTAP00000035793/1-683 PFMNSNLMGK TSERGSFSLY SRDTGLPGCQ SSLLRQDLGL GSPAQLSSSG ENSTTRP00000010258/1-690 PFMNSNLMGK TSERGSFSLY SRDTGLPGCQ SSLLRQDLGL GSPAQISSSG 151 200 bmy_07702T0/1-792 ---------- ---------- ---------- ---------- ---------- BACU016389/1-536 ------YYYN GK-------- ---------- ---------- ---TVYAPSP ENSP00000388940/1-706 KPGTAYYSFS ATSSRRRPLH DSAALDPLQA KKVRKVPPGL PS-SVYAPSP ENSBTAP00000035793/1-683 KPGTPYYSFS ATSSRRRPLH DSAALXXLQA KKVRKVPPGL SSFKVYAPSP ENSTTRP00000010258/1-690 KPGTPYYSFS ATSSRRRPLH DSAALDPLQA KKVRKVPPGL PS-SVYAPSP 201 250 bmy_07702T0/1-792 ---------- ---------- MFASTFFMQD GTHNSSDLWS SSNGMSQPGF BACU016389/1-536 NSDDFNRESP SYPSPKPPTS MFASTFFMQD GTHNSSDLWS SSNGMSQPGF ENSP00000388940/1-706 NSDDFNRESP SYPSPKPPTS MFASTFFMQD GTHNSSDLWS SSNGMSQPGF ENSBTAP00000035793/1-683 NSDDFNRESP SYPSPKPPTS MFASTFFMQD GTHNSSDLWS SSNGMSQPGF ENSTTRP00000010258/1-690 NSDDFNRESP SYPSPKPPTS MFASTFFMQD GTHNSSDLWS SSNGMSQPGF 251 300 bmy_07702T0/1-792 GGILGTSTSH MSQSSSYGSL HSHDRLSYPP HSVSPTDINT SLPPMSSFHR BACU016389/1-536 GGILGTSTSH MSQSSSYGSL HSHDRLSYPP HSVSPTDINT SLPPMSSFHR ENSP00000388940/1-706 GGILGTSTSH MSQSSSYGNL HSHDRLSYPP HSVSPTDINT SLPPMSSFHR ENSBTAP00000035793/1-683 GGILGTSTSH MSQSSSYGSL HSHDRLSYPP HSVSPTDINT SLPPMSSFHR ENSTTRP00000010258/1-690 GGILGTSTSH MSQSSSYGSL HSHDRLSYPP HSVSPTDINT SLPPMSSFHR 301 350 bmy_07702T0/1-792 ASTSSSPYVA ASHTPPINGS DSILGTRGNA AGSSQTGDAL GKALASIYSP BACU016389/1-536 ASTSSSPYVA ASHTPPINGS DSILGTRGNA AGSSQTGDAL GKALASIYSP ENSP00000388940/1-706 GSTSSSPYVA ASHTPPINGS DSILGTRGNA AGSSQTGDAL GKALASIYSP ENSBTAP00000035793/1-683 ASTSSSPYVA ASHTPPINGS DSILGTRGNA AGSSQTGDAL GKALASIYSP ENSTTRP00000010258/1-690 ASTSSSPYVA ASHTPPINGS DSILGTRGNA AGSSQTGDAL GKALASIYSP 351 400 bmy_07702T0/1-792 DHTSSSFPSN PSTPVGSPSP LTGTSQWPRP GGQAPSSPSY ENSLHSLKNR BACU016389/1-536 DHTSSSFPSN PSTPVGSPSP LTGTSQWPRP GGQAPSSPSY ENSLHSLKNR ENSP00000388940/1-706 DHTSSSFPSN PSTPVGSPSP LTGTSQWPRP GGQAPSSPSY ENSLHSLKNR ENSBTAP00000035793/1-683 DHTSSSFPSN PSTPVGSPSP LTGTSQWPRP GGQAPSSPSY ENSLHSL--- ENSTTRP00000010258/1-690 DHTSSSFPSN PSTPVGSPSP LTGTSQWPRP GGQAPSSPSY ENSLHSLKNR 401 450 bmy_07702T0/1-792 VEQQLHEHLQ DAMSFLKDVC EQSRMEDRLD RLDDAIHVLR NHAVGPSTSL BACU016389/1-536 VEQQLHEHLQ DAMSFLKDVC EQSRMEDRLD RLDDAIHVLR NHAVGPSTSL ENSP00000388940/1-706 VEQQLHEHLQ DAMSFLKDVC EQSRMEDRLD RLDDAIHVLR NHAVGPSTSL ENSBTAP00000035793/1-683 ---------- ---------- -QSRMEDRLD RLDDAIHVLR NHAVGPSTSL ENSTTRP00000010258/1-690 VEQQLHEHLQ DAMSFLKDVC EQSRMEDRLD RLDDAIHVLR NHAVGPSTSL 451 500 bmy_07702T0/1-792 PAGHSDIHSL LGPSHNAPIG SLNSNYGGSS LVTSSRPASM VGTHREDSVS BACU016389/1-536 PAGHSDIHSL LGPSHNAPIG SLNSNYGGSS LVTSSRPASM VGTHREDSVS ENSP00000388940/1-706 PAGHSDIHSL LGPSHNAPIG SLNSNYGGSS LVASSRSASM VGTHREDSVS ENSBTAP00000035793/1-683 PAGHSDIHSL LGPSHNAPIG SLNSNYGGSS LVTSSRSASM VGTHREDSVS ENSTTRP00000010258/1-690 PAGHSDIHSL LGPSHNAPIG SLNSNYGGSS LVTSSRPASM VGTHREDSVS 501 550 bmy_07702T0/1-792 LNGNHSVLSS TVTASSTDLN HKTQENYRGG LQSQSGTVVP TEIKTENKEK BACU016389/1-536 LNGNHSVLSS TVTASSTDLN HKTQENYRGG LQSQSGTVVP TEIKTENKEK ENSP00000388940/1-706 LNGNHSVLSS TVTTSSTDLN HKTQENYRGG LQSQSGTVVT TEIKTENKEK ENSBTAP00000035793/1-683 LNGNHSVLSS TVTASSTDLN HKTQENYRGG LQSQSGTVVP TEIKTENKEK ENSTTRP00000010258/1-690 LNGNHSVLSS TVTASSTDLN HKTQENYRGG LQSQSGTVVP TEIKTENKEK 551 600 bmy_07702T0/1-792 DENLHEPPSS DDMKSDDESS QKDIKVSSRG RTSSTNEDED LNPEQKIERE BACU016389/1-536 DENLHEPPSS DDMKSDDESS QKDIKVSSRG RTSSTNEDED LNPEQKIERE ENSP00000388940/1-706 DENLHEPPSS DDMKSDDESS QKDIKVSSRG RTSSTNEDED LNPEQKIERE ENSBTAP00000035793/1-683 DENLHEPPSS DDMKSDDESS QKDIKVSSRG RTSSTNEDED LNPEQKIERE ENSTTRP00000010258/1-690 DENLHEPPSS DDMKSDDESS QKDIKVSSRG RTSSTNEDED LNPEQKIERE 601 650 bmy_07702T0/1-792 KERRMANNAR ERLRVRDINE AFKELGRMCQ LHLKSEKPQT KLLILHQAVA BACU016389/1-536 KERRMANNAR ERLRVRDINE AFKELGRMCQ LHLKSEKPQT KLLILHQAVA ENSP00000388940/1-706 KERRMANNAR ERLRVRDINE AFKELGRMCQ LHLKSEKPQT KLLILHQAVA ENSBTAP00000035793/1-683 KERRMANNAR ERLRVRDINE AFKELGRMCQ LHLKSEKPQT KLLILHQAVA ENSTTRP00000010258/1-690 KERRMANNAR ERLRVRDINE AFKELGRMCQ LHLKSEKPQT KLLILHQAVA 651 700 bmy_07702T0/1-792 VILSLEQQVR ESWKRKKSRS GQMLDNYDKW SKYIHPPPQQ PNIFSTLTLP BACU016389/1-536 VILSLEQQVR ER-------- ---------- ---------- ---------- ENSP00000388940/1-706 VILSLEQQVR ER-------- ---------- ---------- ---------- ENSBTAP00000035793/1-683 VILSLEQQVR ER-------- ---------- ---------- ---------- ENSTTRP00000010258/1-690 VILSLEQQVR ER-------- ---------- ---------- ---------- 701 750 bmy_07702T0/1-792 SLLLSRLLPP SALGTYSQIQ AIKNEKYLCL KKSYKLHHAW VDLIHSFRGT BACU016389/1-536 ---------- ---------- ---------- ---------- ---------N ENSP00000388940/1-706 ---------- ---------- ---------- ---------- ---------N ENSBTAP00000035793/1-683 ---------- ---------- ---------- ---------- ---------N ENSTTRP00000010258/1-690 ---------- ---------- ---------- ---------- ---------N 751 800 bmy_07702T0/1-792 LTPKQPALRE GKKKKFLPYR QSHQPHCQEP ILGLVKLPTL WVICKHQPAV BACU016389/1-536 LNPKAACLKR REEEK----- ---------- ---------- ---------- ENSP00000388940/1-706 LNPKAACLKR REEEK----- ---------- ---------- ---------- ENSBTAP00000035793/1-683 LNPKAACLKR REEEK----- ---------- ---------- ---------- ENSTTRP00000010258/1-690 LNPKAACLKR REEEK----- ---------- ---------- ---------- 801 850 bmy_07702T0/1-792 YSSFPSFISR VKADQTRPKR KISFGDRGGS IDIFEIEKFS DTVIVPVFWV BACU016389/1-536 ---------- ---------- ---------- ---------- ---------- ENSP00000388940/1-706 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000035793/1-683 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010258/1-690 ---------- ---------- ---------- ---------- ---------- 851 900 bmy_07702T0/1-792 SGWSTGSLWQ PGFGRPQCPH CFEVFPKTYN CVFPSGGEDH RCISEDLTCL BACU016389/1-536 ---------- ---------- ---------- ---------- ------VSAV ENSP00000388940/1-706 ---------- ---------- ---------- ---------- ------VSAV ENSBTAP00000035793/1-683 ---------- ---------- ---------- ---------- ------VSAV ENSTTRP00000010258/1-690 ---------- ---------- ---------- ---------- ------VSAV 901 950 bmy_07702T0/1-792 GRENPQRQHE FFRSAKQTTL PLLPGGGGGG AGNRGRSSVQ GLLKWRALHL BACU016389/1-536 SAEPP----- -------TTL P--------- ---------- ---------- ENSP00000388940/1-706 SAEPP----- -------TTL P--------- ---------- ---------- ENSBTAP00000035793/1-683 SAEPP----- -------TTL P--------- ---------- ---------- ENSTTRP00000010258/1-690 SAEPP----- -------TTL P--------- ---------- ---------- 951 1000 bmy_07702T0/1-792 VLWETQRGPQ CRPAGEAKTL MRNNKAAQQG LPRVQTQGSG PKKGAVNSDK BACU016389/1-536 ---------- ---------- ---------- -------GTH P--------- ENSP00000388940/1-706 ---------- ---------- ---------- -------GTH P--------- ENSBTAP00000035793/1-683 ---------- ---------- ---------- -------GTH P--------- ENSTTRP00000010258/1-690 ---------- ---------- ---------- -------GTH P--------- 1001 1050 bmy_07702T0/1-792 RGCQGGLTTV TN----- BACU016389/1-536 -----GLSET TNPMGHM ENSP00000388940/1-706 -----GLSET TNPMGHM ENSBTAP00000035793/1-683 -----GLSET TNPMGHM ENSTTRP00000010258/1-690 -----GLSET TNPMGHM