KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:46:02 2014 Check: 00 .. Name: ENSP00000281282/1-1302 Len: 1307 Check: 7396 Weight: 1.00 Name: ENSBTAP00000035800/1-1293 Len: 1307 Check: 9847 Weight: 1.00 Name: BACU001003/1-881 Len: 1307 Check: 5864 Weight: 1.00 Name: bmy_07703T0/1-807 Len: 1307 Check: 9103 Weight: 1.00 Name: ENSTTRP00000010259/1-1274 Len: 1307 Check: 7747 Weight: 1.00 // 1 50 ENSP00000281282/1-1302 MELYFGEYQH VQQEYGVHLR LASDDTQKSR SSQNSKAGSY GVSIRVQGID ENSBTAP00000035800/1-1293 MELYFGEYQH VQQEYGVHLR LASDETRKSR NSQHAKAGSY GVSIRVQGID BACU001003/1-881 MELYFGEYQH VQQKYAAHLR LASDETKKSR NSQHAKAGSY GVSIRVQGID bmy_07703T0/1-807 MELYFGEYQH VQQEYGVHLR LASDETKKSR NSQHAKAGSY GVSIRVQGID ENSTTRP00000010259/1-1274 MELYFGEYQH VQQEYGVHLR LASDETKKSR NSQPAKAGSY GVSIRVQGID 51 100 ENSP00000281282/1-1302 GHPYIVLNNT ERCLAGTSFS ENGPPFPPPV INNLPLHSSN GSVPKENS-E ENSBTAP00000035800/1-1293 GHPYIVLNNT EQCLAGTSFS ENGPSFPAPM INNLPLHPSK GSVVEESSAE BACU001003/1-881 GHPYIVLNNT ERCLAGASFP EDGPSFPSPV TSNLPLPSSN GSVLEEDSAE bmy_07703T0/1-807 GHPYIVLNNT ERCLAGTSFS EDGPSFPSPV TSNLPLHSSN GSVLEENSAE ENSTTRP00000010259/1-1274 GHPYIVLNNT ERCLAGTSFS ENGPSFPSPV TSNLPLHSSN GSVLEENSAE 101 150 ENSP00000281282/1-1302 ELQLPENPYA QPSPIRNLKQ PLLHEGKNGV LDRKDGSVKP SHLLNFQRHP ENSBTAP00000035800/1-1293 ELQLPENPYA PPGPVRNLKQ PSVFEGKNGA LERKEEPRKA SPMLNFERHP BACU001003/1-881 ELQLPENPYA PPGPVRNLKQ PSLFEGKNGV LDHKGEAMKP SPVLNFQRHP bmy_07703T0/1-807 ELQLPENPYA PPGPVRNLKQ PSLFEGKNGV LDHKGEAMKP SPVLNFQRHP ENSTTRP00000010259/1-1274 ELQLPENPYA PPGPGRNLKQ PSFFEGKNGV LDHTGEAMKP SPVLNFQRHP 151 200 ENSP00000281282/1-1302 ELLQPYDPEK NELNLQNHQP SESNWLKTLT EEGINNKKPW TCFPKPSNSQ ENSBTAP00000035800/1-1293 ELLQPYDPEK NELSLKNHQP PETSWLKAL- REGTNNKKAW TCMPKPSLSQ BACU001003/1-881 ELLQPYDPEK NELNLQNHQP PESNWLKGFA EEGTNSKKAW TCSPKPSHSQ bmy_07703T0/1-807 ELLQPYDPEK NELNLQNHQP PESNWLKAFA EEGTNSKKAW TCSPKPSHSQ ENSTTRP00000010259/1-1274 ELLQPYDPEQ NELNLQNHQP A-SNWLKAFA EEGTNNKKAW TCSSKPSHSQ 201 250 ENSP00000281282/1-1302 PTSPSLEDPA KSGVTAIRLC SSVVIEDPKK QTSVCVNVQS CTKERVGEEA ENSBTAP00000035800/1-1293 PTSPPSEDPA RSNVTAIRLC SSVVIDDPKK QTSVCMNVQS CSKECLAEEA BACU001003/1-881 LTRPPSEDPA RSSVTAIRLC SSVVIDDPKK QTSVCVNVQS CSKEGLAEEA bmy_07703T0/1-807 PTRPPPEDPA RSSVTAIRLC SSVVIDDPKK QTSVCVNVQS CSKEGLAEEA ENSTTRP00000010259/1-1274 PTRPPTEDPA RSSVTAIRLC SSVVIDDPKK QTSVCVNVQS CSKEGLAEEA 251 300 ENSP00000281282/1-1302 LFTSGRPLTA HSPHAHPETK KTRPDVLPFR RQDSAGPVLD GARSRRSSSS ENSBTAP00000035800/1-1293 LAPSGRPLPT PSLQAHLEAK KTRPDVLPFR RQDSAGPVLD GARSRRSSSS BACU001003/1-881 LAPSGRPLP- ----NHPEAK KTRPDVLPFR RQDSAGPVLD GARSRRSSSS bmy_07703T0/1-807 LAPSGRPLP- ----THPEAK KTRPDVLPFR RQDSAGPVLD GARSRRSSSS ENSTTRP00000010259/1-1274 LAPSGRPLPT HSAHTHPEAK KTRPDVLPFR RQDSAGPVLD GARSRRSSSS 301 350 ENSP00000281282/1-1302 STTPTSANSL YRFLLDDQEC AIHADNVNRH ENRRYIPFLP GTGRDIDTGS ENSBTAP00000035800/1-1293 STTPTSANSL YRFLLDDQEC AIHADNVNRH ENRRYIPFLP GTGRDIDTGS BACU001003/1-881 STTPTSANSL YRFLLDDQEC AIHADNVNRH ENRRYIPFLP GTGRDIDTGS bmy_07703T0/1-807 SATPTSANSL YRFLLDDQEC AIHADNVNRH ENRRYIPFLP GTGRDIDTGS ENSTTRP00000010259/1-1274 STTPTSANSL YRFLLDDQEC AIHADNVNRH ENRRYIPFLP GTGRDIDTGS 351 400 ENSP00000281282/1-1302 IPGVDQLIEK FDQKPGLQRR GRSGKRNRIN TDDRKRSRSV DSAFPFGLQG ENSBTAP00000035800/1-1293 IPGVDQLIEK FDQKPGMQRR GRSGKRNRIN PEDRKRSRSV DSAFPFGLQG BACU001003/1-881 IPGVDQLIEK FDQKPGLQRR GRSGKRNRIN PEDRKRSRSV DSAFPFCLQG bmy_07703T0/1-807 IPGVDKLIEK FDQKPGLQRR GRSGKRNRIN PEDRKRSRSV DSAFPFGLQG ENSTTRP00000010259/1-1274 IPGVDQLIEK FDQKPGLQRR GRSGKRNRIN PEDRKRSRSV DSAFPFGLQG 401 450 ENSP00000281282/1-1302 NSEYLIEFSR NLGKSSEHLL RPSQVCPQRP LSQERRGKQS VGRTFAKLQG ENSBTAP00000035800/1-1293 NSEYLTEFSR NLGKSSEHLL RPSQVCPPR- -AQEHRGRQG GGRAFARLLG BACU001003/1-881 NSEYLTEFSR NLGKSSEDLL RPSQVCPQRA QAQEHRGRQG GGRAFARLQG bmy_07703T0/1-807 NSEYLTEFSR NLGKSSEHLL RPSQVCPQRA QAQEHRGRQG GGRAFARLQG ENSTTRP00000010259/1-1274 NSEYLTEFSR NLGKSSEHLL RPSQVCPQRA QAQEHGGRQG GVRAFARLQG 451 500 ENSP00000281282/1-1302 AAHGASCAHS RPPQPNIDGK VLETEGSQES TVIRAPSLGA QSKKEEEVKT ENSBTAP00000035800/1-1293 -------AQP RPPLQNKDGK VPENKSAQES PTGRTSSLPA QTKKEEEIKT BACU001003/1-881 -------AQP RPPLQNKDGK VPENKGGQES PTRRTSSLPA QTKKGEEIKT bmy_07703T0/1-807 -------AQP RPPLQNKDGK VPENKGGQES PTGRTSSLPA QTKKGEEIKT ENSTTRP00000010259/1-1274 -------AQP RPPLQNKDGK VPENKGGQES PTGRTSSLPA QTKKGEEIKT 501 550 ENSP00000281282/1-1302 ATATLMLQNR ATATSPDSGA KKISVKTFPS ASNTQATPDL LKGQQELTQQ ENSBTAP00000035800/1-1293 VTATLMLQNP ALATSPDSGT KRISVKTFTS TSNTQATPDL LKGQQELTQQ BACU001003/1-881 ATATLMLQNR ALATSPDSAS SC----DLIT DIVFQATPDL LKGQQELTQQ bmy_07703T0/1-807 ATATLMLQNR ALATSPDSGT KRISVKTFTS TSNTQATPDL LKGQQELTQQ ENSTTRP00000010259/1-1274 ATATLMLQNR ALATSPDSGT KRISVKTFTS TSNTQATPDL LKGQQELTQQ 551 600 ENSP00000281282/1-1302 TNEETAKQIL YNYLKEGSTD NDDATKRKVN LVFEKIQTLK SRAAGSAQGN ENSBTAP00000035800/1-1293 TNEETAKQIL YNYLKEGSTD NDDATKRKVN LVFEKIQTLK SRAAGSTQGN BACU001003/1-881 TNEETAKQIL YNYLKEGSTD NDDATKRKVN LVFEKIQTLR SRAAGSAQGN bmy_07703T0/1-807 TNEETAKQIL YNYLKEGSTD NDDATKRKVN LVFEKIQTLK SRAAGSTQGN ENSTTRP00000010259/1-1274 TNEETAKQIL YNYLKEGSTD NDDATKRKVN LVFEKIQTLK SRAAGSTQGN 601 650 ENSP00000281282/1-1302 NQACNSTSEV KDLLEQKSKL TIEVAELQRQ LQLEVKNQQN IKEERERMRA ENSBTAP00000035800/1-1293 NQASNSSSEV KDLLEQKNKL TTEVAELQTQ LQLEVKNQQN IKEERDRMKA BACU001003/1-881 TQASNSSSEV KDLLEQKNKL TTEVAELQRQ LQLEVK---- ---------- bmy_07703T0/1-807 NQASNSSSEV KDLLEQKNKL TTEVAELQRQ LQLEVKNQQN IKEERDRVKA ENSTTRP00000010259/1-1274 NQASNSSSEV KDLLEQKKKL TTEVAELQRQ LQLEVKNQQN IKEESESMKA 651 700 ENSP00000281282/1-1302 NLEELRSQHN EKVEENSTLQ QRLEESEGEL RKNLEE-LFQ VKMEREQHQT ENSBTAP00000035800/1-1293 DLEVLQSQHD SKVEESTVLQ RRLEESEGAL RRHLEE-LFQ VKMEREQHQT BACU001003/1-881 ---------- ---------- ---------- ---------- VKMEREQHQT bmy_07703T0/1-807 NLEALQSQHE SKVEENAELQ RRLEGSEGEL RRHLEE-LFQ VKMEREQHQT ENSTTRP00000010259/1-1274 KL-------- ---------- -------GEL RRHLEEVLFQ VKMEREQHQT 701 750 ENSP00000281282/1-1302 EIRDLQDQLS EMHDELDSAK RSEDREKGAL IEELLQAKQD LQDLLIAKEE ENSBTAP00000035800/1-1293 EIRDLQDQLS EMHDELDSAK QSEDREKGAL IEELLQAKQD LQHLLIAKEE BACU001003/1-881 EIRDLQDQLS EMHDELDSAK QSEDREKGAL IEELLQAKQD LQHLLIAKEE bmy_07703T0/1-807 EIRDLQDQLS EMHDELDSAK QSEDREKGAL IEELLQAKQD LQHLLIAKEE ENSTTRP00000010259/1-1274 EIRDLQDQLS EMHDELDSAK QSEDREKGAL IEELLQAKQD LQHLLIAKEE 751 800 ENSP00000281282/1-1302 QEDLLRKRER ELTALKGALK EEVSSHDQEM DKLKEQYDAE LQALRESVEE ENSBTAP00000035800/1-1293 QEDLLRKRER ELTALKGALK EEVSSHDREM DKLKEQYDAE LLALRESVEE BACU001003/1-881 QEDVLRKRER ELTALKGALK EEVSSHDQEM DKLKEQYDAE LQALRESVEE bmy_07703T0/1-807 QEDLLRKRER ELTALKGALK EEVSSHDQEM DKLKEQYDAE LQALRESVEE ENSTTRP00000010259/1-1274 QEDLLRKRER ELTALKGALK EEVSSHDQEM DRLKEQYDAE LRALRESVEE 801 850 ENSP00000281282/1-1302 ATKNVEVLAS RSNTSEQDQA GTEMRVKLLQ EENEKLQGRS EELERRVAQL ENSBTAP00000035800/1-1293 ATKNVEVLAS RSSSAEQTQV GAEMRVKALQ EENEKLRGSV EELERTVARL BACU001003/1-881 AAKSPSV--- ---------- ---------- ---------- ---------- bmy_07703T0/1-807 ATK------- ---------- ---------- ---------- ---------- ENSTTRP00000010259/1-1274 ATKNVEVLAS RSSTAEQTQV GPEMRAKALQ EENEKLRESI HELERTVARL 851 900 ENSP00000281282/1-1302 QRQIEDLKGD EAKAKETLKK YEGEIRQLEE ALVHARKEEK EAVSARRALE ENSBTAP00000035800/1-1293 QRQLADLQDD EAKAKETLKK CEGETRQLEE ALLHARKEEK EATSAKRALQ BACU001003/1-881 ---------- ---ASPVWYR GQGGGLPSED V--------- ---------- bmy_07703T0/1-807 ---------- ---------- --GETR---- ---------- ---------- ENSTTRP00000010259/1-1274 QRQVADLQGD EAKAKEMLKK YQGETRQLEE ALVHARKEEK EAASARRALE 901 950 ENSP00000281282/1-1302 NELEAAQGNL SQTTQEQKQL SEKLKEESEQ KEQLRRLKNE MENERWHLGK ENSBTAP00000035800/1-1293 TELEEAQRNL SRATQEQKQL SERLKDEAEQ KEQLRRLKNE MENERWHLDK BACU001003/1-881 ---------- ---------- ---------- --------GL VSTAYW---- bmy_07703T0/1-807 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010259/1-1274 SELEDAQRNL SQATQEQRQL SEKLKDETKQ KEQLRRLKGE MENERWHLDK 951 1000 ENSP00000281282/1-1302 TIEKLQKEMA DIVEASRTST LELQNQLDEY KEKNRRELAE MQRQLKEKTL ENSBTAP00000035800/1-1293 TIEKLQKEMA DIVEVSRTST LELQNQLDEY KEKNRRELAE MQRQLKEKTL BACU001003/1-881 ---------- ---------- -----QGDPF GGGEIKGPAK VTRQTRPES- bmy_07703T0/1-807 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010259/1-1274 TIEKLQKEMA DIVEVSRAST LELQNQLDEY KEKNRRELAE MQRQLKEKTL 1001 1050 ENSP00000281282/1-1302 EAEKSRLTAM KMQDEMRLME EELRDYQRAQ DEALTKRQLL EQTLKDLEYE ENSBTAP00000035800/1-1293 EAEKSHLTAM KLQDEMRLME EELRDYQRAQ EEALTKRQLL EQTLKDLEYE BACU001003/1-881 ---------- ---------- ---------G EPGIQIHEQL SQG-TGIRSE bmy_07703T0/1-807 ---------- ---------- -----FHQMI DPDLVHRR-- ---------- ENSTTRP00000010259/1-1274 EAEKSRLTAV KMQDETRLLE EELRDYQRAQ EEALTKRQLL EQTLKDLEYE 1051 1100 ENSP00000281282/1-1302 LEAKSHLKDD RSRLVKQMED KVSQLEMELE EERNNSDLLS ERISRSREQM ENSBTAP00000035800/1-1293 LEAKSHLKDD RGRLVKQMED KVSQLEMELE EERNNSDLLS ERITRSREQM BACU001003/1-881 GQAGGPLWGD GLRLLS--AS SVAAVGTEL- ---------- ---------- bmy_07703T0/1-807 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010259/1-1274 LEAKSHLKDD RSRLLKQLED KVSQLEMELE EERNNSDSLS ERIARGREQM 1101 1150 ENSP00000281282/1-1302 EQLRNELLQE RAARQDLECD KISLERQNKD LKSRIIHLEG SYRSSKEGLV ENSBTAP00000035800/1-1293 EQMRNELLQE RAMKQDLECD KISLERQNKD LKSRIIHLEG SYRSSKEGLV BACU001003/1-881 ---------- ---------- ---------- ---------- ---------- bmy_07703T0/1-807 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010259/1-1274 EQMRNELLQE RAVKQDLECD KISLERQNKD LKSRIIHLEG SYRSSKEGLV 1151 1200 ENSP00000281282/1-1302 VQMEARIAEL EDRLESEERD RANLQLSNRR LERKVKELVM QVDDEHLSLT ENSBTAP00000035800/1-1293 VQMEARIAEL EDRLESEERD RASLQLSNRR LERKVKELVM QVDDEHLSLT BACU001003/1-881 ---------- ---------- ---------- ---------- ---------- bmy_07703T0/1-807 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010259/1-1274 VQLEARIAEL EDRLESEERD RASLQVSNRR LERKVKELVM QVDDEHLSLT 1201 1250 ENSP00000281282/1-1302 DQKDQLSLRL KAMKRQVEEA EEEIDRLESS KKKLQRELEE QMDMNEHLQG ENSBTAP00000035800/1-1293 DQKDQLSLRL KAMKRQVEEA EEEIDRLESS KKKLQRELEE QMDVNEQLQG BACU001003/1-881 ---------- ---------- -----RLAPP ARPVGLGVDE GGRGNRRSGS bmy_07703T0/1-807 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010259/1-1274 DQKDQLSLRL KAMKRQVEEA EEEIDRLESS KKKLQRELEE QMDVNEHLQG 1251 1300 ENSP00000281282/1-1302 QLNSMKKDLR LKKLPSKVLD DM---DDDDD LSTDGGSLYE APVSYTFSKD ENSBTAP00000035800/1-1293 QLNSMKKDLR LKKLPSKVLD DV---DDDDD LSTDGGSLYE APLSYTFPKD BACU001003/1-881 EIPGCRRS-- ---------- ---------- ---------- ---PWVPGTS bmy_07703T0/1-807 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010259/1-1274 QLNSMKKDLR LKKLPSKVLD DVDGDDDDDD LSTDGGSLYE APLSYTFAKD 1301 1350 ENSP00000281282/1-1302 STVASQI ENSBTAP00000035800/1-1293 STVVSQI BACU001003/1-881 GDFKGHR bmy_07703T0/1-807 ------- ENSTTRP00000010259/1-1274 GTAASQI