KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:46:06 2014 Check: 00 .. Name: bmy_16571T0/1-317 Len: 599 Check: 9680 Weight: 1.00 Name: ENSP00000371634/1-599 Len: 599 Check: 7508 Weight: 1.00 Name: ENSBTAP00000035897/1-599 Len: 599 Check: 7066 Weight: 1.00 Name: ENSTTRP00000007802/1-580 Len: 599 Check: 5432 Weight: 1.00 Name: BACU016552/1-491 Len: 599 Check: 1887 Weight: 1.00 // 1 50 bmy_16571T0/1-317 ---------- ---------- ---------- ---------- ---------- ENSP00000371634/1-599 MMNKLYIGNL SPAVTADDLR QLFGDRKLPL AGQVLLKSGY AFVDYPDQNW ENSBTAP00000035897/1-599 MMNKLYIGNL SPAVTADDLR QLFGDRKLPL AGQVLLKSGY AFVDYPDQNW ENSTTRP00000007802/1-580 ---------- -------DLR QFFGDKKLPL -GQVLLKSGY AFVD-PDQNW BACU016552/1-491 ---------- -------MNR S--------- ---------- --ID-PGGS- 51 100 bmy_16571T0/1-317 ---------- ---------- ---------- SRKIQIRNIP PHLQWEVLDG ENSP00000371634/1-599 AIRAIETLSG KVELHGKIME VDYSVSKKLR SRKIQIRNIP PHLQWEVLDG ENSBTAP00000035897/1-599 AIRAIETLSG KVELHGKIME VDYSVSKKLR SRKIQIRNIP PHLQWEVLDG ENSTTRP00000007802/1-580 AIRAIETLSG KVELHGKIME VDYSVSKKLR SRKIQIRNIP PHLQWEXXXX BACU016552/1-491 ---------- ---------- -----SPTLS SNKAHLSLL- -HFR------ 101 150 bmy_16571T0/1-317 LLAQYGTVEN VEQVNTDTET AVVNVTYATR EEAKTAIEKL SGHQFENYSF ENSP00000371634/1-599 LLAQYGTVEN VEQVNTDTET AVVNVTYATR EEAKIAMEKL SGHQFENYSF ENSBTAP00000035897/1-599 LLAQCGTVEN VEQVNTDTET AVVNVTYATR EEAKTAIEKL SGHQFENYSF ENSTTRP00000007802/1-580 XXXXXXXXXX XXXXNTDTET AVVNVTYATR EEAKTAIEKL SGHQFENYSF BACU016552/1-491 ---------- ---------- ---------- -----AIEKL SGHQFENYSF 151 200 bmy_16571T0/1-317 KISYIPDEEV SSPSPPQRAQ RGDHSSREQG HAPGGSSQAR QIDFPLRILV ENSP00000371634/1-599 KISYIPDEEV SSPSPPQRAQ RGDHSSREQG HAPGGTSQAR QIDFPLRILV ENSBTAP00000035897/1-599 KISYIPDEEV SSPSPPQRAQ RGDHSSREQG HAPGGSSQAR QIDFPLRILV ENSTTRP00000007802/1-580 KISYIPDEEV SSPSPPQRAQ RGDHSSREQG HAPGGSSQAR QIDFPLRILV BACU016552/1-491 KISYIPDEEV SSPSPPQRAQ RGDHSSREQG HAPGGSSQAR QIDFPLRILV 201 250 bmy_16571T0/1-317 PTQFVGAIIG KEGLTIKNIT KQTQSRVDIH RKENSGAAEK PVTIHATPEG ENSP00000371634/1-599 PTQFVGAIIG KEGLTIKNIT KQTQSRVDIH RKENSGAAEK PVTIHATPEG ENSBTAP00000035897/1-599 PTQFVGAIIG KEGLTIKNIT KQTQSRVDIH RKENSGAAEK PVTIHATPEG ENSTTRP00000007802/1-580 PTQFVGAIIG KEGLTIKNIT KQTQSRVDIH RKENSGAAEK PVTIHATPEG BACU016552/1-491 PTQFVGAIIG KEGLTIKNIT KQTQSRVDIH RKENSGAAEK PVTIHATPEG 251 300 bmy_16571T0/1-317 TSEACRMILE IMQKEADETK L--------- ---------- ---------- ENSP00000371634/1-599 TSEACRMILE IMQKEADETK LAEEIPLKIL AHNGLVGRLI GKEGRNLKKI ENSBTAP00000035897/1-599 TSEACRMILE IMQKEADETK LAEEIPLKIL AHNGLVGRLI GKEGRNLKKI ENSTTRP00000007802/1-580 TSEACRMILE IMQKEADETK LAEEIPLKIL AHNGLVGRLI GKEGRNLKKI BACU016552/1-491 TSEACRMILE IMQKEADETK LAEEIPLKIL AHNGLVGRLI GKEGRNLKKI 301 350 bmy_16571T0/1-317 ---------- --LQDLSIYN PERTITVKGT VEACANAEIE IMKKLREAFE ENSP00000371634/1-599 EHETGTKITI SSLQDLSIYN PERTITVKGT VEACASAEIE IMKKLREAFE ENSBTAP00000035897/1-599 EHETGTKITI SSLQDLSIYN PERTITVKGT VEACANAEIE IMKKLREAFE ENSTTRP00000007802/1-580 EHETGTKITI SSLQDLSIYN PERTITVKGT VEACANAEIE IMKKLREAFE BACU016552/1-491 EHETGTKITI SSLQDLSIYN PERTITVKGT VEACANAEIE IMKKLREAFE 351 400 bmy_16571T0/1-317 NDMLAVNQQA NLIPGLNLSA LGIFSTGLSM LPPPAGPRGA PPAPPYHPFA ENSP00000371634/1-599 NDMLAVNQQA NLIPGLNLSA LGIFSTGLSV LSPPAGPRGA PPAAPYHPFT ENSBTAP00000035897/1-599 NDMLAVNQQA NLIPGLNLSA LGIFSTGLSV LPPPAGPRGA PPAPPYHPFA ENSTTRP00000007802/1-580 NDMLAVNQQA NLIPGLNLSA LGIFSTGLSM LPPPAGPRGA PPGPPYHPFT BACU016552/1-491 NDMLAVNQQA NLIPGLNLSA LGIFSTGLSM LPPPAGPRGA PPAPPYHPFA 401 450 bmy_16571T0/1-317 VSSSAFRGLL VLLQAAAFLC H--------- ---------- ---------- ENSP00000371634/1-599 THSGYFSSLY PHHQFGPFPH HHSYPEQEIV NLFIPTQAVG AIIGKKGAHI ENSBTAP00000035897/1-599 THSGYFSSLY PPHQFGPFPH HHSYPEQEIV NLFIPTQAVG AIIGKKGAHI ENSTTRP00000007802/1-580 THSGYFSSLY PPHQFGPFPH HHSYPEQEIV NLFIPTQAVG AIIGKKGAHI BACU016552/1-491 THSGYFSSLY PPHQFGPFPH HHSYPEQEIV NLFIPTQAVG AIIGKKGAHI 451 500 bmy_16571T0/1-317 ---------- ---------- -------VES EPKPSF---- ---------- ENSP00000371634/1-599 KQLARFAGAS IKIAPAEGPD VSERMVIITG PPEAQFKAQG RIFGKLKEEN ENSBTAP00000035897/1-599 KQLARFAGAS IKIAPAEGPD VSERMVIITG PPEAQFKAQG RIFGKLKEEN ENSTTRP00000007802/1-580 KQLARFAGAS IKIAPAEGPD VSERMVIITG PPEAQFKAQG RIFGKLKEEN BACU016552/1-491 KQLARFAGAS IKIAPAEGPD VSERMVIITG PPEAQFKAQG RIFGKLKEEN 501 550 bmy_16571T0/1-317 ---------- ---------- ---------- ---------- ---------- ENSP00000371634/1-599 FFNPKEEVKL EAHIRVPSST AGRVIGKGGK TVNELQNLTS AEVIVPRDQT ENSBTAP00000035897/1-599 FFNPKEEVKL EAHIRVPSST AGRVIGKGGK TVNELQNLTS AEVIVPRDQT ENSTTRP00000007802/1-580 FFNPKEEVKL EAHIRVPSST AGRVIGKGGK TVNELQNLTS AEVIVPRDQT BACU016552/1-491 FFNPKEEVKL EAHIRVPSST AGRVIGKGGK TVNELQNLTS AEVIVPRDQT 551 600 bmy_16571T0/1-317 ---------- ---------- ---------- ---------- -GGCAHKGL ENSP00000371634/1-599 PDENEEVIVR IIGHFFASQT AQRKIREIVQ QVKQQEQKYP QGVASQRSK ENSBTAP00000035897/1-599 PDENEEVIVR IIGHFFASQT AQRKIREIVQ QVKQQEQKYP QGVASQRSK ENSTTRP00000007802/1-580 PDENEEVIVR IIGHFFASQT AQRKIREIVQ QVKQQEQKYP QGVASQRSK BACU016552/1-491 PDENEEVIVR IIGHFFASQT AQRKIREIVQ QVKQQEQKYP QGVASQRSK