KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:46:07 2014 Check: 00 .. Name: ENSP00000296252/1-451 Len: 454 Check: 2185 Weight: 1.00 Name: ENSBTAP00000035908/1-454 Len: 454 Check: 1321 Weight: 1.00 Name: bmy_16568T0/1-233 Len: 454 Check: 4980 Weight: 1.00 Name: BACU016554/1-409 Len: 454 Check: 5934 Weight: 1.00 Name: ENSTTRP00000002137/1-445 Len: 454 Check: 1631 Weight: 1.00 // 1 50 ENSP00000296252/1-451 MLRFYLFISL LCLSRSDAEE TCPSFTRLSF HSAVVGTGLN VRLMLYTRKN ENSBTAP00000035908/1-454 MFKLHSTRSS LLLGTSDTDE TCPSFTKLSF HSAVVGTGLN VKLMLYTRRN bmy_16568T0/1-233 ---------- ---------- ---------- ---------- ---------- BACU016554/1-409 ---------- --FLFSDTDE TCPSFTKLSF HSAVVGTGLN VKLMLYTRRN ENSTTRP00000002137/1-445 MLRLYFLISL MCLVRSDTDE TCPSFTKLSF HSAVVGTGLN VKLMLYTMRN 51 100 ENSP00000296252/1-451 LTCAQTINSS AFGNLNVTKK TTFIVHGFRP TGSPPVWMDD LVKGLLSVED ENSBTAP00000035908/1-454 PTCAQAINST VLGNLNVTKK TTFVVHGFRP TGSAPVWIED LVEGLLSVED bmy_16568T0/1-233 ---------- ---------- ---------- --------MD LLK------- BACU016554/1-409 LTCAQAINST VLGNLNVTKK TIFIVHGFRP TGSPPVWLED LVEGLLSVDD ENSTTRP00000002137/1-445 PTCA------ VLGNLNVTKK TIFTVHGFRP TGSPPVWMED LVEGLLSVDD 101 150 ENSP00000296252/1-451 MNVVVVDWNR GATTLIYTHA SSKTRKVAMV LKEFIDQMLA EGASLDDIYM ENSBTAP00000035908/1-454 MNVVIVDWNR GATTVMYNHA SSKTRKVATV LKEFIDLMLA EGASLDDIYI bmy_16568T0/1-233 ---------- ---------- ---------- -------FQA EGASLDDIYM BACU016554/1-409 MNVVVVDWNQ GATTVIYNHA SRKTRKVAIV LKEFIDQMLA EGASLDDIYM ENSTTRP00000002137/1-445 MNVVVVDWNQ GATTVIYNHA SGKTRKVAIV LKEFIDQMLA EGASLDDIYM 151 200 ENSP00000296252/1-451 IGVSLGAHIS GFVGEMYDGW LGRITGLDPA GPLFNGKPHQ DRLDPSDAQF ENSBTAP00000035908/1-454 IGVSLGAHIA GFVGKMYDGQ LGRITGLDPA GPLFNGRPPE DRLDPRDAQF bmy_16568T0/1-233 IGVSLGAHVA GFVGKMYNGQ LGRITGLDPA GPLFNGRPPE DRLDPGDAQF BACU016554/1-409 IGVSLGAHVA GFVGKMYNGQ LGRITGLDPA GPLFNGRPPE DRLDPGDAQF ENSTTRP00000002137/1-445 IGVSLGAHVA GFVGKMYNGQ LGRITGLDPA GPLFNGRPPE DRLDPGDAQF 201 250 ENSP00000296252/1-451 VDVIHSDTDA LGYKEPLGNI DFYPNGGLDQ PGCPKTILG- --GFQYFKCD ENSBTAP00000035908/1-454 VDVIHSDTDA LGYKKQLGNI DFYPNGGLDQ PGCPQTIFGD NQGMQYFKCD bmy_16568T0/1-233 VDVIHSDIDA LGYREPLGNI DFYPNGGLDQ PGCPQTIFG- --GMQYFKCD BACU016554/1-409 VDVIHSDTD- ---------- ---------- ---------- --GMQYFKCD ENSTTRP00000002137/1-445 VDVIHSDIDA LGYREPLGNI DFYPNGGLDQ PGCPKTIFG- --GMQYFKCD 251 300 ENSP00000296252/1-451 HQRSVYLYLS SLRESCTITA YPCDSYQDYR NGKCVSCGTS QKESCPLLGY ENSBTAP00000035908/1-454 HQRSVYLYLS SLRENCTITA YPCDSYQDYR NGKCINCGIS QTEPCPVLGY bmy_16568T0/1-233 HQRSVYLYLS SLRENCTITA YPCDSYRDYR NGKCVNCGIS QTESCPLLGY BACU016554/1-409 HQRSVYLYLS SLRENCTITA YPCDSYRDYR NGKCVNCGIS QTESCPLLGY ENSTTRP00000002137/1-445 HQRSVYLYLS SLRENCTITT YPCDSYRDYR NGKCVNCGIS QTESCPLLGY 301 350 ENSP00000296252/1-451 YADNWKDHLR GKDPPMTKAF FDTAEESPFC MYHYFVDIIT WNKNVRRGDI ENSBTAP00000035908/1-454 YADNWKDYLR EGDPPMIKAF FDTAEEKPFC IYHYFVDIIT WNKNVRRGSI bmy_16568T0/1-233 YADNWKDYLR ERDPPMTKAF FDTAEEKPFC IYHYFVDIIT WNKNIRRGSI BACU016554/1-409 YADNWKDYLM ERDPPMTKAF FDTAEEKPFC IYHYFVDIIT WNKNIRRGSI ENSTTRP00000002137/1-445 YADNWKDYLR ERDPPMTKAF FDTAEEKPFC IYHYFVDIIT WNKNIRRGSI 351 400 ENSP00000296252/1-451 TIKLRDKAGN TTESKINHEP TTFQKYHQVS LLARFNQDLD KVAAISLMFS ENSBTAP00000035908/1-454 TIKLKDKAGN TTESKINHEP ATFQKYHQVS LLARFNQDLD KVEAISLVFS bmy_16568T0/1-233 TIKLRDKAGN TTESKINQ-- ---------- ---------- ---------- BACU016554/1-409 TIKLRDKAGN TTESKINHEP TTFQKYHQVS LLARFNQDLD KVAAISLVFS ENSTTRP00000002137/1-445 TIKLRDKAGN TTESKINHEP TTFQKYHQVS LLARFNQDLD KVAAISLVFS 401 450 ENSP00000296252/1-451 TGSLIGPRYK LRILRMKLRS LAHPERPQLC RYDLVLMENV ETVFQPILCP ENSBTAP00000035908/1-454 TGSVIGPRYK LRILRMKLRS LGHPERPQLC RYDLVLMENV ETVFQPILCP bmy_16568T0/1-233 ---------- ---------- ---------- ---------- ---------- BACU016554/1-409 TGSVIGPRYK LRILRMKLRS LAHPERPQLC RYDLVLMENV ETVFQPILCP ENSTTRP00000002137/1-445 TGSVTGPRYK LRILRMKLRS LAHPERPQLC RYDLVLIENV ETVFQPILCP 451 500 ENSP00000296252/1-451 ELQL ENSBTAP00000035908/1-454 KLQM bmy_16568T0/1-233 ---- BACU016554/1-409 ELQM ENSTTRP00000002137/1-445 ELQM