KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 4 Type: P Thu May 15 17:46:09 2014 Check: 00 ..
Name: bmy_15846T0/1-549 Len: 880 Check: 6051 Weight: 1.00
Name: ENSBTAP00000035968/1-849 Len: 880 Check: 526 Weight: 1.00
Name: BACU008501/1-139 Len: 880 Check: 6877 Weight: 1.00
Name: ENSTTRP00000002395/1-858 Len: 880 Check: 5941 Weight: 1.00
//
1 50
bmy_15846T0/1-549 ---------- -PRAPWGPEA SSRAQKHRWT VGRLLEPGQW EPVLLSPSRP
ENSBTAP00000035968/1-849 ----MLQKQM PVWVSHYPPD SCQEDGDRPA ATCALESTQT S---------
BACU008501/1-139 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000002395/1-858 MTIQTSEGQP GSGTDVFVLQ SLQGDEEGST AGRSVSELEQ TQVLETPHLP
51 100
bmy_15846T0/1-549 P----ATIAQ REELSPCHLL TVRVIRMKNV QQADMISQTD CFVSLWLPTT
ENSBTAP00000035968/1-849 -----WAGLV REGLSPCHLL TVRVIRMKNV RQADVVSLTD CFVSLWLPTA
BACU008501/1-139 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000002395/1-858 PLLPMAPGGS QEELSPCHLL TVRVIRMKNV QQADVVSQTD CFVSLWLPTS
101 150
bmy_15846T0/1-549 SHKRLRTRTI ANCRNPEWNE TFKFQIQTQV KNVLELSVCD EDIVTPDDHF
ENSBTAP00000035968/1-849 SEKRLRTRTI SNCRNPEWNE TFSFQIQSQV KNVLELSVCD EDTVTPDDHL
BACU008501/1-139 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000002395/1-858 SPKRLRTRTI SNCRNPEWNE SFKFQIQTRV KNVLELSVCD DDTLTPDDHF
151 200
bmy_15846T0/1-549 LTVLYDLTKL CFREKTHVKF PLNTEGMEEL EVEFLLEESL DK--------
ENSBTAP00000035968/1-849 LTVLYDLTKL CFRKKTHVKF PLNTEGMEEL EVEFLLEESP SPPESLITNG
BACU008501/1-139 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000002395/1-858 LTVLYDLTKL CFREKTHVKF PLNREGM-EL EVEFLLEESP SPPESLITNG
201 250
bmy_15846T0/1-549 ---------- ---------C PAWRFMQNPG DRRRIGKGLL VTVTESFEHT
ENSBTAP00000035968/1-849 VLVVTVLPES PVALGPPVAA PLREQNCGKE NQAQLEKDLL VTVTESFEHT
BACU008501/1-139 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000002395/1-858 VLVSRQM--- ---------S CLEVHAESRR QKNRKVKGLP VTV-GVFEHT
251 300
bmy_15846T0/1-549 QHISRCLEPC RPNPACFHYP KYFQPQVHVE VPKSQWSSAL SCCGASKNGP
ENSBTAP00000035968/1-849 QHISPCLESC CSNLACFQYP KYFQPEVHVE LPKSPWICEL CCC-ARQKGP
BACU008501/1-139 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000002395/1-858 QHISHCLEPC GPNPACFHYP KYFQPQVHVE VPKSQWSSVL CCCSACKNDP
301 350
bmy_15846T0/1-549 VCQPLDCLRD GQAVTLPV-- ---------- ---------- -----AELEF
ENSBTAP00000035968/1-849 VCQSLHCLPD GQAVTLPLGD GESLGGR--- --EALDVRLG FSLCQAELEF
BACU008501/1-139 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000002395/1-858 VCLSLDCLPD GQAVTLPVNK NCELHMKSTP CSEALDVRLG FSLCQAELEF
351 400
bmy_15846T0/1-549 LQKRRVVVAE ALKEVLQLEE DLQADEVPLI AIMATGGGIR SMTAMYGHLL
ENSBTAP00000035968/1-849 LQKRRVVAAQ ALKEVLQLEE DLRADEVPLI AIMATGGGTR SMTAMYGHLL
BACU008501/1-139 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000002395/1-858 LQKRRVVVAE ALKQVLQLEE DLQADEVPLI SIMATGGGTR SMTAMYGHLL
401 450
bmy_15846T0/1-549 GLQKLNILNC ASYITGLSGA TWTMATLYRD PDWSSKNLEL AILEARRHVV
ENSBTAP00000035968/1-849 ALQKLNILNC ASYITGLSGA TWTMATLYRD PDWSSKNLER AILEARRHVV
BACU008501/1-139 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000002395/1-858 GLQKLNILNC ASYITGLSGA TWTMATLYRD PDWSSKNLEL AILEARRHVV
451 500
bmy_15846T0/1-549 KDKMPALFPN QLLRFQEELQ QRRQEGYKVT FTDFWGLLVE ACLGDERNEC
ENSBTAP00000035968/1-849 KDKMPALFPD QLLKFEEELQ QRRQEGYKVT FTDFWGLLIE ACLGDERGSF
BACU008501/1-139 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000002395/1-858 KDKTPALFPD QLLKFREELQ QRRQEGYKVT FTDFWGLLVE ACLGDEXXXX
501 550
bmy_15846T0/1-549 KLSDQSAALC QGQNPLPIYL TINVKDDISN QDFREWFEFS PYEVGLPKYG
ENSBTAP00000035968/1-849 SSEIQTGALT AFSGSLPLLI THHLEADICP SSCAEWFEFS PYEVGMQKYG
BACU008501/1-139 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000002395/1-858 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXWFEFS PYEVGLQKYG
551 600
bmy_15846T0/1-549 GFIPTELFGS EFFMGRLMRR IPESRICYML GLWSSIFSLN LLDAWNLSHT
ENSBTAP00000035968/1-849 AFIPTELFGS EFFMGRLMKR IPESRMCYML GLWSSIFSLN LLDAWNLSHT
BACU008501/1-139 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000002395/1-858 AFIPTELFGS EFFMGRLMRR IPESRICYML GLWSSIFSLN LLDA-NLSHT
601 650
bmy_15846T0/1-549 SEEFFHRWTR ERVH------ ---------- ---------- ----------
ENSBTAP00000035968/1-849 SEEFFHKWTR DRVHDIEDEP LLPEIPKCDA NVLDTTVVTP ASWLSNTFRD
BACU008501/1-139 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000002395/1-858 SEEFFHRWT- ERVHDI-DEP LLPEIPKCDA NMLDTTVVMP GSWLSNTFRN
651 700
bmy_15846T0/1-549 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000035968/1-849 ILTHRAFVSK FHNFLLGLQL HTDYLQNSQF SMWKDTVLDG FPNQLTGSVK
BACU008501/1-139 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000002395/1-858 ILTSRAFLSE FHNFLLGLQM HTDYYQNGQF STWKDSVLDG FPNKLTASVN
701 750
bmy_15846T0/1-549 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000035968/1-849 HLCLLDTAFF VNSSYAPLLR PERKVDLIIH LNYCAGSQTK PMKQTCEYCA
BACU008501/1-139 ---------- ---------- ---------- ---------- -MKQTCKYCT
ENSTTRP00000002395/1-858 HLCLLDTAFV INSSYPPVLR PERKADLIIH LNYCAGSQTK PMKQTCKYCT
751 800
bmy_15846T0/1-549 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000035968/1-849 VQNIPFLKYE LQKEEDSLKE CYLLENSQEP DTPIVTFFPL ICDTFQNYKA
BACU008501/1-139 EQNIPFPKYE VQEEDDKLKE CYLLENSQES DAPIVIFFPL INDTFQKYKA
ENSTTRP00000002395/1-858 EQNIPFPKYE VQEEEDNLKE CYLMESSQEP DAPTVIFFPL ISDTFQKYKA
801 850
bmy_15846T0/1-549 ---------- -----DIGG- ---------- ---------- ----------
ENSBTAP00000035968/1-849 PGVERSPEEL EQGQVDIYGP KTPYATKELT YTEAAFDKLV KLSEYNILNN
BACU008501/1-139 PGVERSPEEL EQGQIDICGP KTPYATKELT YTEAAFDKLV KLSEYNILNN
ENSTTRP00000002395/1-858 PGVERSPEEL EQGQVDIYGP KSPYATKELT YTEAAFDKLV KLSEYNILNN
851 900
bmy_15846T0/1-549 ---------- ---------- ----------
ENSBTAP00000035968/1-849 KDKLLQALRL AVERKRQ-KS QCPP------
BACU008501/1-139 KDKLLQALRL AVEKKKRLKS QCPPKVPGHP
ENSTTRP00000002395/1-858 KDKLLQALRL AVEKKKRLKS QCPPK-----