KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:46:10 2014 Check: 00 .. Name: ENSP00000319831/1-631 Len: 661 Check: 4002 Weight: 1.00 Name: ENSBTAP00000036015/1-631 Len: 661 Check: 5594 Weight: 1.00 Name: bmy_10969T0/1-655 Len: 661 Check: 3880 Weight: 1.00 Name: BACU018057/1-631 Len: 661 Check: 4133 Weight: 1.00 Name: ENSTTRP00000008912/1-629 Len: 661 Check: 1335 Weight: 1.00 // 1 50 ENSP00000319831/1-631 MALRKELLKS IWYAFTALDV EKSGKVSKSQ LK-------- ---------- ENSBTAP00000036015/1-631 MALRKELLKS IWYAFTALDV EKSGKVSKSQ LK-------- ---------- bmy_10969T0/1-655 MALRKELLKS VWYAFTALDV EKSGKVSKSQ LKDGGGDKWG GGSRPLTQFW BACU018057/1-631 MALRKELLKS IWYAFTALDV EKSGKVSKSQ LK-------- ---------- ENSTTRP00000008912/1-629 -MLRKEVVKS FWYAFSALDV -KSDKVSKSQ LK-------- ---------- 51 100 ENSP00000319831/1-631 ---------- --VLSHNLYT VLHIPHDPVA LEEHFRDDDD GPVSSQGYMP ENSBTAP00000036015/1-631 ---------- --VLSHNLYT VLHIPHDPVA LEEHFRDDDD GPVSSQGYMP bmy_10969T0/1-655 LGFRKANCPL SQVLSHNLYT VLHIPHDPVA LEEHFRDDDD GPVSSQGYMP BACU018057/1-631 ---------- --VLSHNLYT VLHIPHDPVA LEEHFRDDDD GPVSSQGYMP ENSTTRP00000008912/1-629 ---------- --VLSHNLYT VLHIPHDPVA LEEHFRDDDD GPVSSQGYMP 101 150 ENSP00000319831/1-631 YLNKYILDKV EEGAFVKEHF DELCWTLTAK KNYRADSNGN SMLSNQDAFR ENSBTAP00000036015/1-631 YLNKYILDKV EEGAFVKEHF DELCWTLTAK KNYQVDSNGN SMLSNQDAFR bmy_10969T0/1-655 YLNKYILDKV EEGAFVKEHF DELCWTLTAK KNYRVDSNGN SMLSNQDAFR BACU018057/1-631 YLNKYILDKV EEGAFVKEHF DELCWTLTAK KNYRVDSNGN SMLSNQDAFR ENSTTRP00000008912/1-629 YLNKYILDKV EEGAFVKEHF DELCWTLTAK KNYQVDSNGN SMLSNQDAFR 151 200 ENSP00000319831/1-631 LWCLFNFLSE DKYPLIMVPD EVEYLLKKVL SSMSLEVSLG ELEELLAQEA ENSBTAP00000036015/1-631 LWCLFNFLSE DKYPLIMVPD EVEYLLKKVL SSMSLEVGLG ELEELLAQEA bmy_10969T0/1-655 LWCLFNFLSE DKYPLIMVPD EVEYLLKKVL SSMSLEVGLG ELEELLAQEA BACU018057/1-631 LWCLFNFLSE DKYPLIMVPD EVEYLLKKVL SSMSLEVGLG ELEELLAQEA ENSTTRP00000008912/1-629 LWCLFNFLSE DKYPLIMVPD EVEYLLKKVL SSMSLEVGLG ELEELLAQEA 201 250 ENSP00000319831/1-631 QVAQTTGGLS VWQFLELFNS GRCLRGVGRD TLSMAIHEVY QELIQDVLKQ ENSBTAP00000036015/1-631 QAAQSSGGLS VWQFLELFNS GRCLRGVGRD TLSMAIHEVY QELIQDVLKQ bmy_10969T0/1-655 QAAQSTSGLS VWQFLELFNS GRCLRGVGRD TLSMAIHEVY QELIQDVLKQ BACU018057/1-631 QAAQSTSGLS VWQFLELFNS GRCLRGVGRD TLSMAIHEVY QELIQDVLKQ ENSTTRP00000008912/1-629 QAAQSTSGLS VWQFLELFNS GRCLRGVGRD TLSMAIHEVY QELIQDVLKQ 251 300 ENSP00000319831/1-631 GYLWKRGHLR RNWAERWFQL QPSCLCYFGS EECKEKRGII PLDAHCCVEV ENSBTAP00000036015/1-631 GYLWKRGHLR RNWAERWFQL QPSCLCYFGS EECKEKRGMI PLDAQCCVEV bmy_10969T0/1-655 GYLWKRGHLR RNWAERWFQL QPSCLCYFGS EECKEKRGTI LLDAQCCVEV BACU018057/1-631 GYLWKRGHLR RNWTERWFQL QPNCLCYFGS EECKEKRGTI LLDAQCCVEV ENSTTRP00000008912/1-629 GYLWKRGHLR RNWAERWFQL QPSCLCYFGS EECKEKRGTI LLDAQCCVEV 301 350 ENSP00000319831/1-631 LPDRDGKRCM FCVKTANRTY EMSASDTRQR QEWTAAIQMA IRLQAEGKTS ENSBTAP00000036015/1-631 LPDREGKRCM FCVKTASRTY EMSASDTRQR QEWTAAIQTA IRLQAEGKTS bmy_10969T0/1-655 LPDREGKRCM FCVKTASRTL PCPRPAPPAP ---SAAIQTA IRLQAEGKMS BACU018057/1-631 LPDREGKRCM FCVKTASRTY EMSASDTRQR QEWTAAIQTA IRLQAEGKMS ENSTTRP00000008912/1-629 LPDREGKRCM FCVKTASRTY EMSASDTRQR QEWTAAIQTA IRLQAEGKMS 351 400 ENSP00000319831/1-631 LHKDLKQKRR EQREQRERRR AAKEEELLRL QQLQEEKERK LQELELLQEA ENSBTAP00000036015/1-631 LHKDLKQKRR EQREQRERRR AAKEEEMLRL QQLQEEKERK LQELELLQEA bmy_10969T0/1-655 LHKDLKQKRR EQREQRERRR VAKEEEMLRL QQLQEEKERK LQELELLQEA BACU018057/1-631 LHKDLKQKRR EQREQRERRR AAKEEEMLRL QQLQEEKERK LQELELLQEA ENSTTRP00000008912/1-629 LHKDLKQKRR EQREQRERRR AAKEEEVLRL QQLQEEKERK LQELELLQEA 401 450 ENSP00000319831/1-631 QRQAERLLQE EEERRRSQHR ELQQALEGQL REAEQARASM QAEMELKEEE ENSBTAP00000036015/1-631 QRQAERLMQE EEERRRSQHR ELQQALEVQL REAEQARASM QAEMELKKEE bmy_10969T0/1-655 QRQAERLLQE EEERRRSQHR ELQQALEGQL REAEQARASM QAEMELKKEE BACU018057/1-631 QRQAERLLQE EEERRRTQHR ELQQALEGQL REAEQARASM QAEMELKKEE ENSTTRP00000008912/1-629 QRQAERLLQE EEERRRSQHR ELQQALEGQL REAEQARASM QAEMELKKEE 451 500 ENSP00000319831/1-631 AARQRQRIKE LEEMQQRLQE ALQLEVKARR DEESVRIAQT RLLEEEEEKL ENSBTAP00000036015/1-631 AARQRQRIKE LEEMQQRLQE ALQLEVKARQ DEEAVRLAQT RLLEEEEEKL bmy_10969T0/1-655 AARQRQRIEE LEEMQQRLQE ALQLEVKARQ DEEAVRLAQT RLLEEEEDKL BACU018057/1-631 AARQRQRIEE LEEMQQRLQE ALQLEVKARQ DEEAVRLAQT RLLEEEEEKL ENSTTRP00000008912/1-629 AARQRQRIEE LEEMQQRLQE ALQLEVKARQ DEEAVRLAQT RLLEEEEEKL 501 550 ENSP00000319831/1-631 KQLMQLKEEQ ERYIERAQQE KEELQQEMAQ QSRSLQQAQQ QLEEVRQNRQ ENSBTAP00000036015/1-631 KQLLQLKEEQ ERYIERAQQE KQELQQEMAL QSRSLQQAQQ QLEEVRQNRQ bmy_10969T0/1-655 KQLLQLKEEQ ERYIEQAQQE KQELQQEMAL QSRSLQQAQQ QLEEVRQNRQ BACU018057/1-631 KQLLQLKEEQ ERYIERAQQE KQELQQEMAL QSRSLQQAQQ QLEEVRQNRQ ENSTTRP00000008912/1-629 KQLLQLKEEQ ERYIERAQQE KQELQQEMAL QSRSLQQAQQ QLEEVRQNRQ 551 600 ENSP00000319831/1-631 RADEDVEAAQ RKLRQASTNV KHWNVQMNRL MHPIEPGDKR PVTSSSFSGF ENSBTAP00000036015/1-631 RADEDVEAAQ QKLRQASTNV KHWNVQMNRL MHPIKPGDKR PTTSSSFTGF bmy_10969T0/1-655 RADEDVE--- RKLRQASTNV KHWNVQMNRL MHPIEPGDKR PTTSSSFTGF BACU018057/1-631 RADEDVEAAQ RKLRQASTNV KHWNVQMNRL MHPIEPGDKR PTTSSSFTGF ENSTTRP00000008912/1-629 RADEDVEAAQ RKLRQASTNV KHWNVQMNRL MHPIEPGDKR PTTSSSFTGF 601 650 ENSP00000319831/1-631 QPPLLAHRDS SLKRLTRWGS QGNRTPSPNS NEQQKSLNGG DEAPAPASTP ENSBTAP00000036015/1-631 QAPLLARRDS SLKRLTRWGS RDNKTPSPSS SDQQKSLNGG EDASSSASAS bmy_10969T0/1-655 QAPLLARRDS SLKRLTHWGS HDNKTPSPSS SEQQKSLNCG KEAPISASAP BACU018057/1-631 QAPLLARRDS SLKRLTHWGS HDNKTPSPSS SEQQKSLSCG EEAPISASAP ENSTTRP00000008912/1-629 QAPQLARRDS SLKRLTHRGS HGSKTPSPSS SEQQKSLNCG EEAPISASAP 651 700 ENSP00000319831/1-631 QEDKLDPAPE N ENSBTAP00000036015/1-631 QEDKLDLAPE N bmy_10969T0/1-655 QEDKVDPAPE N BACU018057/1-631 QEDKVDPAPE N ENSTTRP00000008912/1-629 QEDKVDPAPE N