KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:46:11 2014 Check: 00 .. Name: ENSP00000221980/1-924 Len: 1122 Check: 1356 Weight: 1.00 Name: ENSBTAP00000036018/1-922 Len: 1122 Check: 1195 Weight: 1.00 Name: bmy_13752T0/1-1117 Len: 1122 Check: 8062 Weight: 1.00 Name: ENSTTRP00000009045/1-662 Len: 1122 Check: 2577 Weight: 1.00 Name: BACU002503/1-926 Len: 1122 Check: 8824 Weight: 1.00 // 1 50 ENSP00000221980/1-924 ---------- ---------- -MPG-PSPGL RRALLGLW-- ---------- ENSBTAP00000036018/1-922 ---------- ---------- -MPG-PSPGL HRALLGLW-- ---------- bmy_13752T0/1-1117 MTLGGTPKRG SARRRRGART QGPGGPSPAP PETSAPFWVR ISPEFKAVPP ENSTTRP00000009045/1-662 ---------- ---------- -MPG-PSPGL HRALLGLW-- ---------- BACU002503/1-926 ---------- ---------- -MPG-PSPGL HRALLGLW-- ---------- 51 100 ENSP00000221980/1-924 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000036018/1-922 ---------- ---------- ---------- ---------- ---------- bmy_13752T0/1-1117 GASVWLNCSS SCPRPEDSSL RTELRRGDTL SGPGWVSYQL LDVRAWSSDV ENSTTRP00000009045/1-662 ---------- ---------- ---------- ---------- ---------- BACU002503/1-926 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000221980/1-924 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000036018/1-922 ---------- ---------- ---------- ---------- ---------- bmy_13752T0/1-1117 HCFVTCAGET RGATARITAY KQPRSVILEP PVLMGSEYTL RCHVTHVFPV ENSTTRP00000009045/1-662 ---------- ---------- ---------- ---------- ---------- BACU002503/1-926 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000221980/1-924 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000036018/1-922 ---------- ---------- ---------- ---------- ---------- bmy_13752T0/1-1117 GFLVVTLRRG GRVIYSESLE RFTGRDLANV TLTYALRARP SDFGQPVTCH ENSTTRP00000009045/1-662 ---------- ---------- ---------- ---------- ---------- BACU002503/1-926 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000221980/1-924 AALGL-GLFG LS-------- --AVSQEPFW ADLQPRVAFV ERGGSLWLNC ENSBTAP00000036018/1-922 AALGL-GLLS LS-------- --AVTQEPFW ADLQPRVALV ERGGSLWLNC bmy_13752T0/1-1117 ARLNLDGLVV LSSSAPVTLP VLVVAQEPFW ADLQPRVALV ERGGSLWLNC ENSTTRP00000009045/1-662 AALGL-GLFG LS-------- --VVAQEPFW ADLQPRVALV ERGGSLWLNC BACU002503/1-926 AALGL-GLFG LS-------- --VVAQEPFW ADLQPRVALV ERGGSLWLNC 251 300 ENSP00000221980/1-924 STNCPRPERG GLETSLRRNG TQRGLRWLAR QLVDIREPET QPVCFFRCAR ENSBTAP00000036018/1-922 STNCPRPERG GLETSLRRNG TQKGLRWLAR QLVDIREPET QPVCFFRCAR bmy_13752T0/1-1117 STNCPRPERG GLETSLRRNG TQRGLRWLAR QLVDIREPET QPVCFFRCAR ENSTTRP00000009045/1-662 STNCPRPERG GLETSLRRNG TQRGLRWLAR QLVDIREPET QPVCFFRCAR BACU002503/1-926 STNCPRPERG GLETSLRRNG TQRGLRWLAR QLVDIREPET QPVCFFRCAR 301 350 ENSP00000221980/1-924 RTLQARGLIR TFQRPDRVEL MPLPPWQPVG ENFTLSCRVP GAGPRASLTL ENSBTAP00000036018/1-922 RTLQARGLIR TFQRPDRVEL VPLPAWQPVG ENFTLSCRVP GAGPRGSLTL bmy_13752T0/1-1117 RTLQARGLIR TFQRPDRVEL VPLPAWQPVG ENFTLSCRVP GAGPRGSLTL ENSTTRP00000009045/1-662 RTLQARGLIR TFQRPDRVEL VPLPAWQPVG ENFTLSCRVP GAGPRGSLTL BACU002503/1-926 RTLQARGLIR TFQRPDRVEL VPLPAWQPVG ENFTLSCRVP GAGPRGSLTL 351 400 ENSP00000221980/1-924 TLLRGAQELI RRSFAGEPPR ARGAVLTATV LARREDHGAN FSCRAELDLR ENSBTAP00000036018/1-922 TLLRGTQELI RRSFAGESPR ARGAVLTATV LARREDHGAN FSCRAELDLR bmy_13752T0/1-1117 TLLRGAQELI RRSFSGEPPR ARGAVLTATV LARREDHGAN FSCRAELDLR ENSTTRP00000009045/1-662 TLLRGARELI RRSFSGEPPR ARGAVLTATV LARREDHGAN FSCRAELDLR BACU002503/1-926 TLLRGAQELI RRSFSGEPPR ARGAVLTATV LARREDHGAN FSCRAELDLR 401 450 ENSP00000221980/1-924 PHGLGLFENS SAPRELRTFS LSPDAPRLAA PRLLEVGSER PVSCTLDGLF ENSBTAP00000036018/1-922 PHGLGLFENS SAPRELRTFT LPPEPPRLTA PRLLEVGSEG PVSCVIDGLF bmy_13752T0/1-1117 PHGLGLFENS SAPRELRTFA LPPEPPRLAA PRLLEVGSEG PVSCAMDGLF ENSTTRP00000009045/1-662 PHGLGLFENS SAPRELRTFA LPPEPPRLAA PRLLEVGSEG PVSCAMDGLF BACU002503/1-926 PHGLGLFENS SAPRELRTFA LPPEPPRLAA PRLLEVGSEG PVSCAMDGLF 451 500 ENSP00000221980/1-924 PASEARVYLA LGDQNLSPDV TLEGDAFVAT ATATASAEQE GARQLVCNVT ENSBTAP00000036018/1-922 PVSEAGVYLA LGDQRLSPDV TLEGDALMAT TTATASAEQE GARQLVCNVT bmy_13752T0/1-1117 PASEAEVYLA LGDQRLSPDV TLEGDALMAI ATATASAEQE GSRQLVCNVT ENSTTRP00000009045/1-662 PASEAEVYLA LGDQRLSPDV TLEGDALMAT ATATASAEQE GARQLVCNVT BACU002503/1-926 PASEAEVYLA LGDQRLSPDV TLEGDALMAT ATATASAEQE GARQLVCNVT 501 550 ENSP00000221980/1-924 LGGENRETRE NVTIYSFPAP LLTLSEPSVS EGQMVTVTCA AGAQALVTLE ENSBTAP00000036018/1-922 LGGESRETRE NVTVYSFPEP HLTLSEPNAP EGTIVTVTCA AETQALVTLE bmy_13752T0/1-1117 LGGESRETQE NVTVYSFPEP LLTLSEPNAP EGKMVTVTCA AGARALVTLD ENSTTRP00000009045/1-662 LGGESRETQE NVTVYSFPEP LLTLSEPNAP EGKMVTVTCA AGARALVTLD BACU002503/1-926 LGGESRETQE NVTVYSFPEP LLTLTEPNAS EGKMVTVTCA AGARALVTLD 551 600 ENSP00000221980/1-924 GVPAAVPGQP AQLQLNATEN DDRRSFFCDA TLDVDGETLI KNRSAELRVL ENSBTAP00000036018/1-922 GIPAAAPGQP AQLQLNATEY DDRRGFFCDA TLEVDGETLS KNESVELRVL bmy_13752T0/1-1117 GIPAAVPGQP AQLQLNATEN DDRRVFFCDA TLEVDGETLS KNESAELRVL ENSTTRP00000009045/1-662 GIPAAVPGQP AQLQLNATEN DDRRGFFCDA TLEVDGETLR KNESAELRVL BACU002503/1-926 GIPAAVPGQP AQLQLNATEN DDRRVFFCDA TLEVDGETLS KNESAELRVL 601 650 ENSP00000221980/1-924 YAPRLDDSDC PRSWTWPEGP EQTLRCEARG NPEPSVHCAR SDGGAVLALG ENSBTAP00000036018/1-922 YAPRLDDSDC PRSWTWPEGP EQTLRCDARG NPQPSVHCAR PDGAAVLALG bmy_13752T0/1-1117 YAPRLDDSDC PRSWTWPEGP EQTLRCEARG NPEPSVHCAR PDGGAVLALG ENSTTRP00000009045/1-662 YAPRLDDSDC PRSWTWPEGP EQTLRCEARG NPEPSVHCAR PDGGAVLALG BACU002503/1-926 YAPRLDDSDC PRSWTWPEGP EQTLRCEARG NPEPSVHCAR PDGGAVLALG 651 700 ENSP00000221980/1-924 LLGPVTRALS GTYRCKAAND QGEAVKDVTL TVEYAPALDS VGCPERITWL ENSBTAP00000036018/1-922 LLGPVTRALA GTYRCTATND QGQAVKDVTL TVEYAPALDS VGCPERITWL bmy_13752T0/1-1117 LLGPVTRALA GTYRCTATNV QGQAVKDVTL TVEYAPALDS VGCPERITWL ENSTTRP00000009045/1-662 LLGPVTRALA GTYHCTATNV QGQAVKDVTL TVEYAPALDS VGCPERITWL BACU002503/1-926 LLGPVTRALA GTYRCTATNV QGQAVKDVTL TVEYTPALDS VGCPERITWL 701 750 ENSP00000221980/1-924 EGTEASLSCV AHGVPPPDVI CVRSGELGAV IEGLLRVARE HAGTYRCEAT ENSBTAP00000036018/1-922 EGTEVSLSCV ALGVPPPNVS CVRFGGAE-V IEGLMRVARE HAGTYRCEAT bmy_13752T0/1-1117 EGTEASLSCV AHGVPPPSVN CVRSGEAR-V VEGLLRVVRE HAGTYRCEAT ENSTTRP00000009045/1-662 EGTEASLSCV AHGVPPPNVN CVRSGEAR-V VEGTLRVVRE HAGTYRCEAT BACU002503/1-926 EGTEASLSCV AHGVPPPSVN CVRSGEARVV VEGLLRVVRE HAGTYRCEAT 751 800 ENSP00000221980/1-924 NPRGSAAKNV AVTVEYGPRF EEPSCPSNWT WVEGSGRLFS CEVDGKPQPS ENSBTAP00000036018/1-922 NARGSAAKNV AVTVEYGPRF EEVSCPSNWT WVEGSGRLFS CEVAGKPQPS bmy_13752T0/1-1117 NARGSAAKNV AVTVEYGPSF EEVSCPSNWT WVEGSGRLFS CEVDGKPEPS ENSTTRP00000009045/1-662 NARGSAAKNV AVTVEYGPSF EEVSCPSNWT WVEGSGQLFS CEVDGKPEPS BACU002503/1-926 NARGSAAKNV AVTVEYGPSF EEVSCPSNWT WVEGSGRLFS CEVDGKPEPS 801 850 ENSP00000221980/1-924 VKCVGSGGAT EGVLLPLAPP DPSPRAPRIP RVLAPGIYVC NATNRHGSVA ENSBTAP00000036018/1-922 VECVGSGGTS EGVLLPLAPP DPGSRAPRIP SDLAPGTYIC NATNRHGSMV bmy_13752T0/1-1117 VECVGSGGTS EGVLLPLAPP DPGPRAPQIP RELAPGTYIC NATNQHGSMV ENSTTRP00000009045/1-662 VECVGSGGTS EGALLPLAPP DPGPRAPQIP RELAPGTYIC NATNQHGSVV BACU002503/1-926 VECVGSGGTS EGVLLPLAPP DPGPRAPQIP RELAPGTYIC NATNQHGSVV 851 900 ENSP00000221980/1-924 KTVVVSAESP PEMDESTCPS HQTWLEGAEA SALACAARGR PSPGVRCSRE ENSBTAP00000036018/1-922 KMVTVSAESP PQMDESTCPS HQSWLEGAEA AALACSARGR PSPQVSCSRE bmy_13752T0/1-1117 KMVTVSAESP PQMDESTCPS HQTWLEGAEA AALACSARGR PSPQVRCSRE ENSTTRP00000009045/1-662 KMVTVSAE-- ---------- ---------- ---------- ---------- BACU002503/1-926 KMVTVSAESP PQMDESTCPS HQTWLEGAEA AALACSARGR PSPQVRCSRE 901 950 ENSP00000221980/1-924 GIPWPEQQRV SREDAGTYHC VATNAHGTDS RTVTVGVEYR PVVAELAASP ENSBTAP00000036018/1-922 GAPRPQRLRV SREDAGTYRC LATNAHGTDA RIITVGVEYR PVVAELAASP bmy_13752T0/1-1117 GAPRPQRLRV SRQDAGIYHC LATNAHGTDA RIVTVGVEYR PVVAELAASP ENSTTRP00000009045/1-662 ---------- ---------- ---------- ---------- ---------- BACU002503/1-926 GAPRPQRLRV SRQDAGIYHC LATNAHGTDA RIVTVGVEYR PVVAELAASP 951 1000 ENSP00000221980/1-924 PGGVRPGGNF TLTCRAEAWP PAQISWRAPP GALNIGLSSN NSTLSVAGAM ENSBTAP00000036018/1-922 PGGVRPGGNF TLTCRAEAWP PAQISWRAPP GALNIGLSSN NSTLSVAGAM bmy_13752T0/1-1117 PGGVRPGGNF TLTCRAEAWP PAQISWRAPP GAVNIGLSSN NSTLSVAGAM ENSTTRP00000009045/1-662 ---------- ---------- ---------- ---------- ---------- BACU002503/1-926 PGGVRPGGNF TLTCRAEAWP PAQISWRAPP GALNIGLSSN NSTLSVAGAM 1001 1050 ENSP00000221980/1-924 GSHGGEYECA ATNAHGRHAR RITVRVAGPW LWVAVGGAAG GAALLAAGAG ENSBTAP00000036018/1-922 GSHGGEYECA ATNAHGRHTR RITVRVAGPW LWVAVGGAAG GAALLAAGAG bmy_13752T0/1-1117 GSHGGEYECA ATNAHGRHTR RITVRVAGPW LWVAVSGAAG GAALLAAGAG ENSTTRP00000009045/1-662 ---------- ---------- ---------- ---------- ---------- BACU002503/1-926 GSHGGEYECA ATNAHGRHTR RITVRVAGPW LWVAVSGAAG GAALLAAGAG 1051 1100 ENSP00000221980/1-924 LAFYVQSTAC KKGEYNVQEA ESSGEAVCLN GAGGGAGGAA GAEGGPEAAG ENSBTAP00000036018/1-922 LAFYVQSTAC KKGEYNVQEA ESSGEAVCLN GAGAGAGRDA GAEGGSE-AA bmy_13752T0/1-1117 LAFYVQSTAC KKGEYNVQEA ESSGEAVCLN GAGAGAGGGG GAEGATE-AA ENSTTRP00000009045/1-662 ---------- ---------- ---------- ---------- ---------- BACU002503/1-926 LAFYVQSTAC KKGEYNVQEA ESSGEAVCLN GAGAGAGGGG GAEGGRE-LG 1101 1150 ENSP00000221980/1-924 GAAESPAEGE VFAIQLTSA- -- ENSBTAP00000036018/1-922 GTSEVPAGGE VFAIQLPSA- -- bmy_13752T0/1-1117 GTAEAPAGGE VFAIQLTSA- -- ENSTTRP00000009045/1-662 ---------- ---------- -- BACU002503/1-926 WARVSQRRGC RRRRGRGRRR CN