KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:46:12 2014 Check: 00 .. Name: ENSBTAP00000036036/1-348 Len: 455 Check: 5092 Weight: 1.00 Name: ENSTTRP00000009058/1-379 Len: 455 Check: 966 Weight: 1.00 Name: ENSP00000222005/1-378 Len: 455 Check: 8541 Weight: 1.00 Name: bmy_13746T0/1-451 Len: 455 Check: 7128 Weight: 1.00 Name: BACU002499/1-340 Len: 455 Check: 0 Weight: 1.00 // 1 50 ENSBTAP00000036036/1-348 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009058/1-379 ---------- ---------- ---------- ---------- --MVDYSVWD ENSP00000222005/1-378 ---------- ---------- ---------- ---------- --MVDYSVWD bmy_13746T0/1-451 GALRAESVRC CRRSRCCRCC RRRRRCRRCC CQSRSGLGRG GKMVDYSVWD BACU002499/1-340 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000036036/1-348 ---------- ---------- -----QARVE RMEQFQKEKE ELDRGCRECK ENSTTRP00000009058/1-379 HIEVSDDEDE THPNIDTASL FRWRHQARVE RMEQFQKEKE ELDRGCRECK ENSP00000222005/1-378 HIEVSDDEDE THPNIDTASL FRWRHQARVE RMEQFQKEKE ELDRGCRECK bmy_13746T0/1-451 HIEVSDDEDE THPNIDTASL FRWRHQARVE RMEQFQKEKE ELDRGCRECK BACU002499/1-340 ---------- ---------- ---------- -MEQFQKEKE ELDRGCRECK 101 150 ENSBTAP00000036036/1-348 RKVAECQRKL KELEVAEGEG GKAELERLQA EAQQLRKEER SWEQKLEEMR ENSTTRP00000009058/1-379 RKVAECQRKL KDLEVAEGEG SRAELERLQA EAQQLRKEER SWEQKLEEMR ENSP00000222005/1-378 RKVAECQRKL KELEVAE--G GKAELERLQA EAQQLRKEER SWEQKLEEMR bmy_13746T0/1-451 RKVAECQRKL QELEVAEGEG SRAELERLQA EAQQLRKEER SWEQKLEEMR BACU002499/1-340 RKVAECQRKL QELEVAEGKG SRAELERLQA EAQQLRKEER SWEQKLEEMR 151 200 ENSBTAP00000036036/1-348 KKEKSMPWNV DTLSKDGFSK SMVNTKPEQA EEESEEVREQ KHKTFVEKYE ENSTTRP00000009058/1-379 KKEKSMPWNV DTLSKDGFSK SMVNTKPERA EEESEEVREQ KHKTFVEKYE ENSP00000222005/1-378 KKEKSMPWNV DTLSKDGFSK SMVNTKPEKT EEDSEEVREQ KHKTFVEKYE bmy_13746T0/1-451 KKEKSMPWNV DTLSKDGFSK SMVNTKPEQA EEESEEVREQ KHKTFVEKYE BACU002499/1-340 KKEKSMPWNV DTLSKDGFSK SMVNTKPEQA EEESEEVREQ KHKTFVEKYE 201 250 ENSBTAP00000036036/1-348 KQIKHFGMLR RWDDSQKYLS DNVHLVCEET ANYLVIWCID LEVEERPVPQ ENSTTRP00000009058/1-379 KQIKHFGMLR RWDDSQKYLS DNVHLVCEET ANYLVIWCID LEVEEKCALM ENSP00000222005/1-378 KQIKHFGMLR RWDDSQKYLS DNVHLVCEET ANYLVIWCID LEVEEKCALM bmy_13746T0/1-451 KQIKHFGMLR RWDDSQKYLS DNVHLVCEET ANYLVIWCID LEVEEKCALM BACU002499/1-340 KQIKHFGMLR RWDDSQKYLS DNVHLVCEET ANYLVIWCID LEVEEKCALM 251 300 ENSBTAP00000036036/1-348 SQLPHQTSIS QKHIN-SQNL WGGPSTWVSR SFYGDK---- ---------- ENSTTRP00000009058/1-379 EQVAHQTIVM QFILELAKSL KVDPRACFRQ FFTKIK---- ---------- ENSP00000222005/1-378 EQVAHQTIVM QFILELAKSL KVDPRACFRQ FFTKIK---- ---------- bmy_13746T0/1-451 EQVAHQTIVM QFILELAKSL KVDPRACFRQ FFTKIKFRTR CGEPWGISED BACU002499/1-340 EQVAHQTIVM QFILELAKSL KVDPRACFRQ FFTKIK---- ---------- 301 350 ENSBTAP00000036036/1-348 ---------- ------HVDQ GSSESLAQRR PGFHPWV-GK IPWRRERLPT ENSTTRP00000009058/1-379 ---------- ------TADR QYMEGFNDEL EAFKDRVRGR AKLRIEK-AM ENSP00000222005/1-378 ---------- ------TADR QYMEGFNDEL EAFKERVRGR AKLRIEK-AM bmy_13746T0/1-451 LQWEGLGSCA RPCPAQTADR QYMEGFNDEL EAFKDRVRGR AKLRIEK-AM BACU002499/1-340 ---------- ------TADR QYMEGFNDEL EAFKDRVRGR AKLRIEK-AM 351 400 ENSBTAP00000036036/1-348 PVFWPGEFHG LYSPGDRKEL HMTEQLSLHF FTTRDRGATS RWQPSLTHPP ENSTTRP00000009058/1-379 KEYEEEERRK RLGPGGLDPV EVYESLPEXX XXXXXXXXXX XXXXXXXX-- ENSP00000222005/1-378 KEYEEEERKK RLGPGGLDPV EVYESLPEEL QKCFDVKDVQ MLQDAISK-- bmy_13746T0/1-451 KEYEEEERKK RLGPGGLDPV EVYESLPEEL QKCFDVKDVQ MLQDAISK-- BACU002499/1-340 KEYEEEERKK RLGPGGLDPV EVYESLPEEL QKCFDVKDVQ MLQDAISK-- 401 450 ENSBTAP00000036036/1-348 FSPQDAKYHM QRCIDSGLWV PNSKSSEAKD GEEAGTGDPL LEATSKSGDE ENSTTRP00000009058/1-379 XXXXDAKYHM QRCIDSGLWV PNSKSSEAKE EEEAGPGDPL LEASSR-GDE ENSP00000222005/1-378 MDPTDAKYHM QRCIDSGLWV PNSKASEAKE GEEAGPGDPL LEAVPKTGDE bmy_13746T0/1-451 MDPTDAKYHM QRCIDSGLWV PNSKSSEAKE EEEAGPGDPL LEASKP-GDE BACU002499/1-340 MDPTDAKYHM QRCIDSGLWV PNSKSSEAKE EEEAGPGDPL LEASKP-GDE 451 500 ENSBTAP00000036036/1-348 KDVSV ENSTTRP00000009058/1-379 KDVSA ENSP00000222005/1-378 KDVSV bmy_13746T0/1-451 KDVSA BACU002499/1-340 KDVSA