KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:46:38 2014 Check: 00 .. Name: bmy_02985T0/1-306 Len: 594 Check: 9450 Weight: 1.00 Name: ENSTTRP00000007600/1-576 Len: 594 Check: 2935 Weight: 1.00 Name: BACU012982/1-378 Len: 594 Check: 8092 Weight: 1.00 Name: ENSP00000337907/1-576 Len: 594 Check: 2389 Weight: 1.00 Name: ENSBTAP00000036176/1-576 Len: 594 Check: 4326 Weight: 1.00 // 1 50 bmy_02985T0/1-306 MIQSDKGADP PDSKDKKDEK LSTVTNPENG ISQILRLVLQ ELNLFYSRDV ENSTTRP00000007600/1-576 ---------- -------MPA LSAGSGSDTX XXXXXXXXXX XXXXXXXXXX BACU012982/1-378 ---------- -------MPA LSAGSGSDTG LYELLAALPA RLQPHVDSQE ENSP00000337907/1-576 ---------- -------MPA LSTGSGSDTG LYELLAALPA QLQPHVDSQE ENSBTAP00000036176/1-576 ---------- -------MPA LSTGSGNDTG LYELLVALPA QLQPHVDSQE 51 100 bmy_02985T0/1-306 NGVCLLYDLL HSPWLQALLK VYDCLQEFKG KKLIPATPHA QALS------ ENSTTRP00000007600/1-576 X-XXXXXXXX XXXXXXXXXX IHEKLHYYEK QNPTPILQGA AALAGDLTEE BACU012982/1-378 D-LTFLWDVF GEKSLHSLVK IHEKLHYYEK QNPTPILQGA AALAGDLAEE ENSP00000337907/1-576 D-LTFLWDMF GEKSLHSLVK IHEKLHYYEK QSPVPILHGA AALADDLAEE ENSBTAP00000036176/1-576 D-LTFLWDVF GEKSLHSLVK IHEKLHYYEK QNPVPILQGA AALADDLAEE 101 150 bmy_02985T0/1-306 ---------- ---------- -YEALLSAHD TVAQKDFEPL LPPLPDNIPE ENSTTRP00000007600/1-576 LQNKPLSSEI RELLKLLSKP NVKALLSVHD TVALKNYDPV LPPMPDDIDD BACU012982/1-378 LQNKPLNSEI RELLKLLSKP NVKALLSVHD TVALRKYDPV LPPMPDDIDD ENSP00000337907/1-576 LQNKPLNSEI RELLKLLSKP NVKALLSVHD TVAQKNYDPV LPPMPEDIDD ENSBTAP00000036176/1-576 LQNKPLNSEI RELLKLLSKP NVKALLSVHD TVAQKNYDPV LPPMPDDIDN 151 200 bmy_02985T0/1-306 SEEAMRIVCL VKNQQPLGAT IKRHEMTGDI LVARVIHGGL AERSGLLYAG ENSTTRP00000007600/1-576 EEDSVKIIRL VKNREPLGAT IKKDEPTGAV VVARIMRGGA ADRSGLIHVG BACU012982/1-378 EEDSVKIIRL VKNREPLGAT IKKDDQTGAV VVARIMRGGA ADRSGLIHVG ENSP00000337907/1-576 EEDSVKIIRL VKNREPLGAT IKKDEQTGAI IVARIMRGGA ADRSGLIHVG ENSBTAP00000036176/1-576 EEDSVKIIRL VKNREPLGAT IKKDEQTGAI VVARIMRGGA ADRSGLIHVG 201 250 bmy_02985T0/1-306 DKLVEVNGVS VEGLDPEQVI HILAMSRGTI IFKVVP-VSD PSVNSQKMVY ENSTTRP00000007600/1-576 DELREVNGIP VEDKSPEEII QILAQSQGAI TFKIIPSIKE DTPSKEGKMF BACU012982/1-378 DELREVNGIP VEDKSPEEII QILAQSQGAI TFKIIPSIKE ETPSKEGKMF ENSP00000337907/1-576 DELREVNGIP VEDKRPEEII QILAQSQGAI TFKIIPGSKE ETPSKEGKMF ENSBTAP00000036176/1-576 DELREVNGIP VEDKRPEEII QILAQSQGAI TFKIIPSIKE ETPSKEGKMF 251 300 bmy_02985T0/1-306 VRAMTEYWPQ EDPAIPCMDA GLPFQKGDIL QIVDQNDALW WQARKISDLG ENSTTRP00000007600/1-576 IKALFDYDPN EDKAIPCKEA GLSFKKGDIL QIMSQDDATW WQAKHEGDAN BACU012982/1-378 IKALFDYDPN EDKAIPCKEA GLSFKKGDIL QIMSQDDATW WQAKHEGDAN ENSP00000337907/1-576 IKALFDYNPN EDKAIPCKEA GLSFKKGDIL QIMSQDDATW WQAKHEADAN ENSBTAP00000036176/1-576 IKALFDYDPN EDKAIPCKEA GLSFKKGDIL QIMSQDDATW WQAKHEGDAN 301 350 bmy_02985T0/1-306 TCAGLIPSNH LLKRK----- ---------- --------QR EFWWSQ---- ENSTTRP00000007600/1-576 PRAGLIPSKH FQERRLALRR PEILVQPLQV SNRKSSGFRR SFRLSRKDKK BACU012982/1-378 PRAGLIPSKH FQERRLALRR PEVLVQPLKV SNRKSSGFRR SFRLSRKGKK ENSP00000337907/1-576 PRAGLIPSKH FQERRLALRR PEILVQPLKV SNRKSSGFRK SFRLSRKDKK ENSBTAP00000036176/1-576 PRAGLIPSKH FQERRLALRR PEILVQPLKV SSRKSSGFRR SFRLSRKDKK 351 400 bmy_02985T0/1-306 ---------- ---------- ------PYQP H--------- ---------- ENSTTRP00000007600/1-576 TNKSMYECKK SDQYDTADVP TYEEVTPYRR QMNENYRLVV LVGPVGVGLN BACU012982/1-378 TNKSMYECKK SDQYDTADMP TYEEVTPYRR QMNENYRLVV LVGSPA---- ENSP00000337907/1-576 TNKSMYECKK SDQYDTADVP TYEEVTPYRR QTNEKYRLVV LVGPVGVGLN ENSBTAP00000036176/1-576 TNKSMYECKR SDQYDTADVP TYEEVTPYRR QTNEKYRLVV LVGPVGVGLN 401 450 bmy_02985T0/1-306 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007600/1-576 ELKRKLLISD TQHYGVTVPH TTRPRRSQES DGVEYVFISK HLFETDVQNN BACU012982/1-378 ---------- ---------- ---------- ---------- ---------- ENSP00000337907/1-576 ELKRKLLISD TQHYGVTVPH TTRARRSQES DGVEYIFISK HLFETDVQNN ENSBTAP00000036176/1-576 ELKRKLLISD TQHYGVTVPH TTRPRRSQES DGVEYIFISK HLFETDVQNN 451 500 bmy_02985T0/1-306 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007600/1-576 KFIEYGEYKN NYYGTSIDSV RSVLAKNKVC LLDVQPHTVK HLRTLEFKPY BACU012982/1-378 ---------- ---------- ---------- ---------- ---------- ENSP00000337907/1-576 KFIEYGEYKN NYYGTSIDSV RSVLAKNKVC LLDVQPHTVK HLRTLEFKPY ENSBTAP00000036176/1-576 KFIEYGEYKN NYYGTSIDSV RSVLAKNKVC LLDVQPHTVK HLRTLEFKPF 501 550 bmy_02985T0/1-306 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007600/1-576 VIFIKPPSIE RLRETRKNAK VISSRDEQGA AKPFTEEDFQ EMIKSAQIME BACU012982/1-378 ---------- ---------- ---------- ---------- ---------- ENSP00000337907/1-576 VIFIKPPSIE RLRETRKNAK IISSRDDQGA AKPFTEEDFQ EMIKSAQIME ENSBTAP00000036176/1-576 VIFIKPPSIE RLRETRKNAK IISSRDDQGA AKPFTEDDFQ EMIKSAQIME 551 600 bmy_02985T0/1-306 ---------- ---------- NHLKST---- ---------- ---- ENSTTRP00000007600/1-576 SQYGHLFDKT IVNDDLTVAF SELKTTFDKL ETDTHWVPVS WLHS BACU012982/1-378 ---------- ---------- ---------- ---------- ---- ENSP00000337907/1-576 SQYGHLFDKI IINDDLTVAF NELKTTFDKL ETETHWVPVS WLHS ENSBTAP00000036176/1-576 SQYGHLFDKT IVNDDLAVAF NELKTTFDKL ETDTHWVPVS WLHS