KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:46:38 2014 Check: 00 .. Name: ENSP00000358931/1-596 Len: 599 Check: 1721 Weight: 1.00 Name: ENSBTAP00000036249/1-596 Len: 599 Check: 4443 Weight: 1.00 Name: ENSTTRP00000013194/1-595 Len: 599 Check: 2611 Weight: 1.00 Name: bmy_22581T0/1-377 Len: 599 Check: 9500 Weight: 1.00 Name: BACU011433/1-558 Len: 599 Check: 5703 Weight: 1.00 // 1 50 ENSP00000358931/1-596 MADAEARAEF PEEARPDRGT LQVLQDMASR LRIHSIRATC STSSGHPTSC ENSBTAP00000036249/1-596 MADAEASATM ADEAKPDSKT LQILRDMANR LRIHSIRATC ASSSGHPISC ENSTTRP00000013194/1-595 MADQEASGTM AEEAKIDEDI LQVLRDMANR LRLHAIRTXX XXXXXHPILC bmy_22581T0/1-377 MADKEANGAM AEEAKLDENI LQVLQDMANR LRLHVIRSLC ASSSRHPTLC BACU011433/1-558 ---------- ---------- ---------- ---------- -MSFSHPTVC 51 100 ENSP00000358931/1-596 SSSSEIMSVL FFYIMRYKQS DPENPDNDRF VLAKRLSFVD VATGWLGQGL ENSBTAP00000036249/1-596 SSAAEIMSVL FFHVMRYKQA DPKNPDNDRF ILSKRLSFVD VATGWLGQGL ENSTTRP00000013194/1-595 SSASEIMSVL LFYIMRYKLT DPENPNNDRF VLSKRLSFVN VATGWLGQGL bmy_22581T0/1-377 SSAAEIMSVL FFYIMRYKQM DPENPNNDRF VLSKSLSFVN VATGWLGQGL BACU011433/1-558 SSAAEIMSVL FFYIMRYKQM DPENPNNDRF VLSKSLSFVN VATGWLGEGL 101 150 ENSP00000358931/1-596 GVACGMAYTG KYFDRASYRV FCLMSDGESS EGSVWEAMAF ASYYSLDNLV ENSBTAP00000036249/1-596 GAACGMAYTG KYFDKASYRV FCLVGDVESW EGSVWEALAF ASHYSLDNLV ENSTTRP00000013194/1-595 GIACGMAYTG RYFDKASYRV FCLIGDGESS EGSVWEAMAF ASHYSLDNLV bmy_22581T0/1-377 GVACGMAYTG KYFDKASYRV FCLIGGGESS EGSVWEAMAF ASHHSLDNLV BACU011433/1-558 GVACGMAYTG KYFDKASYRV FCLIGGGESS EGSVWEAMAF ASHHSLDNLV 151 200 ENSP00000358931/1-596 AIFDVNRLGH SGALPAEHCI NIYQRRCEAF GWNTYVVDGR DVEALCQVFW ENSBTAP00000036249/1-596 AIFDVNRLTH STTLPLEHSI DVYQKRCEAF GWNTLVVDGR DVEALCQVFW ENSTTRP00000013194/1-595 AIFDVNHLCH SGTQPLEHCV DLFQKRCEAF GWSTFVVDGR DVEALCHVFQ bmy_22581T0/1-377 AIFDVNRLCH SGTLPLKHCT DVFQKRCEAF GWNTFVVDGR DVEALCQVFQ BACU011433/1-558 AIFDVNRLYH SGTLPLKHCT DVFQKRCEAF GWNTFVVDGR DVEALCQVFQ 201 250 ENSP00000358931/1-596 QASQVKHKPT AVVAKTFKGR GTPSIEDAES WHAKPMPRER ADAIIKLIES ENSBTAP00000036249/1-596 QAAQMKNKPT AVVAKTFKGR GIPSVEDAEN WHGKPMPKER ADAIIKLIES ENSTTRP00000013194/1-595 QAAQVKSKPT AVVAKTFRGH GMPHVEDAEN CHERSMPKER VETIIKLIES bmy_22581T0/1-377 QAAQVKSKPT AIVAKTFRGH GMPHVEDSEN WHERPMPKER VDTIIKLIES BACU011433/1-558 QAAQVKSKPT AIVAKTFRGH GMPQVEDSEN WHERPMPKER VDTIIKLIES 251 300 ENSP00000358931/1-596 QIQTSRNLDP QPPIEDSPEV NITDVRMTSP PDYRVGDKIA TRKACGLALA ENSBTAP00000036249/1-596 QIETNKSLEP KAPIEDSPQI NISVIEMTSP PDYEISDVIA TRKACGLALA ENSTTRP00000013194/1-595 QIQTKKKLNP KPPVEDSPQI NITDIEMTSP PAYNVGDMIA TRKACGLALA bmy_22581T0/1-377 QIQTKKKLDP KPPVEDSPQI NITDIEMISP PAYNVGDTIA TRKACGLALA BACU011433/1-558 QIQTKKKLDP KPPVEDSPQI NIADIEMISP PAYNVGDMIA TRKACGLALA 301 350 ENSP00000358931/1-596 KLGYANNRVV VLDGDTRYST FSEIFNKEYP ERFIECFMAE QNMVSVALGC ENSBTAP00000036249/1-596 KLGHANDRVI VLDGDTKNST FSDIFKREHP ERFIECFIAE QNMVSVALGC ENSTTRP00000013194/1-595 KLGRANDRVV VLDGDSKNST FSDIFKKEHP EHFVECS-SE QSMVSVALGC bmy_22581T0/1-377 KLGHANDRVV VLDGDSKNST FSEIFKKEHP ERFVECFIAE QNMVCM-LG- BACU011433/1-558 KLGHANDRVV VLDGDSKNST FCEVFKKEHP ERFVECCIAE QNMVSVALGC 351 400 ENSP00000358931/1-596 ASRGRTIAFA STFAAFLTRA FDHIRIGGLA ESNINIIGSH CGVSVGDDGA ENSBTAP00000036249/1-596 VTRGRTVAFA CTFAAFLTRA FDQIRMGGIS QTNINLIGSH CGVSIGEDGP ENSTTRP00000013194/1-595 ATRGRMVTFL CTFAAFLTRA FDQIRMGAIS RTSINLIGSH CGVSIGEDSP bmy_22581T0/1-377 ---------- ---TSILSLL IDKQ------ ---------- ---------- BACU011433/1-558 ATRGRTVTFV CTFAAFLSRA FDQIRLGAIS QSNVNLIGSH CGVSIGEDGP 401 450 ENSP00000358931/1-596 SQMALEDIAM FRTIPKCTIF YPTDAVSTEH AVALAANAK- -GMCFIRTTR ENSBTAP00000036249/1-596 SQMALEDLAM FRAIPNCTIF YPSDAISTEH AVFLAANIK- -GMCYIRTSR ENSTTRP00000013194/1-595 SQMALEDLAM FRTVPNCTIF YPSDAISTEH AVLLAANTK- -GMCYIRISR bmy_22581T0/1-377 ---------- ---------- WPT------- ---------- ------RHRR BACU011433/1-558 SQMALEDLAM FRAVPNCTIF YPSDAISTEH AVLLAANTEV SGMCYIRTSR 451 500 ENSP00000358931/1-596 PETMVIYTPQ ERFEIGQAKV LRHCVSDKVT VIGAGITVYE ALAAADELSK ENSBTAP00000036249/1-596 PETAIIYTPQ ESFEIGQAKV IRQSVNDKIT VVGAGITLHE ALAAADDLSK ENSTTRP00000013194/1-595 PETAVIYTPD EIFEIGRAKV VRNSVNDRLT VVGAGVTLHE ALAAADDLSK bmy_22581T0/1-377 P--------- ---------- ---------- ---------- ---------- BACU011433/1-558 PATAVIYTVY ENFEVGQAKV VRNGVNDKLT VVGAGVTLHE ALAAADDLSK 501 550 ENSP00000358931/1-596 Q-DIFIRVID LFTIKPLDVA TIVSSAKATE GRIITVEDHY PQGGIGEAVC ENSBTAP00000036249/1-596 Q-GISLRVID LFTVKPLDAA TIISNAKATG GQIITVEDHY PEGGIGEAVS ENSTTRP00000013194/1-595 Q-DISIRVID LFTVKPLDAA TVISNAKATG GQIITVEDHS SEGGIGEAVC bmy_22581T0/1-377 ---------- ---------- ---------- ---------- -------ALC BACU011433/1-558 QEDISIRVID LFTVKPLDAA TIISNAKATG GQIITVEDHS SEGGIGEAVC 551 600 ENSP00000358931/1-596 AAVSMDPDIQ VHSLAVSGVP QSGKSEELLD MYGISARHII VAVKCMLLN ENSBTAP00000036249/1-596 AAVSMEPDIV VHHLAVSGIP RSGKPSDLLD MFGISSKHII WAVERILMK ENSTTRP00000013194/1-595 AAVSMVPDIL VHQLAVPGAP RSEKPNEPLS MFGISARQIT VAVKCILMN bmy_22581T0/1-377 YSFSF----- ---------- ---------- -------HL- --------- BACU011433/1-558 AAVSMEPDIL VHQLAVSGVP RSGRPSELLS MFGISARHII MAVKCVLMN